Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 2.5e-119 432.2 224 100.0
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 2.8e-38 162.9 186 52.2
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 9.0e-37 157.9 172 54.7
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 2.0e-36 156.8 179 53.1
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 4.5e-36 155.6 172 54.7
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 2.9e-35 152.9 182 52.2
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 4.9e-35 152.1 182 52.7
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 8.4e-35 151.4 186 53.8
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 1.1e-34 151.0 152 57.2
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 1.4e-34 150.6 186 52.7
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 2.4e-34 149.8 182 52.2
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 2.4e-34 149.8 179 54.7
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 7.1e-34 148.3 157 54.8
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 1.6e-33 147.1 185 51.9
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 1.6e-33 147.1 180 51.1
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 2.1e-33 146.7 185 51.4
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 3.5e-33 146.0 152 57.2
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 3.5e-33 146.0 170 54.7
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 4.6e-33 145.6 150 58.0
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 6.0e-33 145.2 141 58.9
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 7.9e-33 144.8 190 51.6
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.3e-32 144.1 172 51.7
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 1.3e-32 144.1 153 54.2
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 1.3e-32 144.1 175 52.6
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 1.3e-32 144.1 141 58.2
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 2.3e-32 143.3 153 58.2
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 2.3e-32 143.3 155 55.5
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.3e-32 143.3 172 51.7
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 3.0e-32 142.9 175 52.6
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 3.9e-32 142.5 153 56.9
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 3.9e-32 142.5 188 49.5
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 5.1e-32 142.1 144 55.6
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 6.7e-32 141.7 151 55.0
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 6.7e-32 141.7 144 55.6
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 8.7e-32 141.4 152 57.2
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 8.7e-32 141.4 152 57.2
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 1.1e-31 141.0 152 57.9
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 1.5e-31 140.6 186 52.7
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 1.5e-31 140.6 152 53.9
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 1.5e-31 140.6 152 56.6
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 1.9e-31 140.2 180 50.6
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 5.6e-31 138.7 152 54.6
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 7.4e-31 138.3 185 48.6
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 7.4e-31 138.3 181 48.6
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 9.6e-31 137.9 130 60.8
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 9.6e-31 137.9 152 55.9
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 9.6e-31 137.9 146 53.4
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 1.6e-30 137.1 151 53.0
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 2.1e-30 136.7 153 52.9
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 2.8e-30 136.3 91 78.0
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 2.8e-30 136.3 91 78.0
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 2.8e-30 136.3 91 78.0
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 2.8e-30 136.3 149 53.0
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 2.8e-30 136.3 184 48.9
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 3.7e-30 136.0 153 57.5
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 4.8e-30 135.6 124 60.5
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 6.2e-30 135.2 91 74.7
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 6.2e-30 135.2 153 52.3
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 8.1e-30 134.8 182 48.4
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 8.1e-30 134.8 91 74.7
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 1.1e-29 134.4 133 57.9
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.1e-29 134.4 186 47.3
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 1.4e-29 134.0 208 48.1
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.4e-29 134.0 90 74.4
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 1.8e-29 133.7 191 47.6
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 2.4e-29 133.3 154 53.9
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 2.4e-29 133.3 91 72.5
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 2.4e-29 133.3 186 47.3
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 2.4e-29 133.3 172 49.4
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.4e-29 133.3 95 70.5
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 2.4e-29 133.3 147 51.7
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 3.1e-29 132.9 134 55.2
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 4.0e-29 132.5 223 41.3
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 5.3e-29 132.1 90 73.3
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 6.9e-29 131.7 158 50.0
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 9.0e-29 131.3 185 44.9
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 9.0e-29 131.3 134 54.5
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 1.2e-28 131.0 91 72.5
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 2.0e-28 130.2 173 49.1
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 3.4e-28 129.4 87 73.6
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 3.4e-28 129.4 90 70.0
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 5.8e-28 128.6 186 45.2
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 1.0e-27 127.9 162 47.5
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 1.3e-27 127.5 195 45.6
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 1.7e-27 127.1 133 54.1
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 2.9e-27 126.3 92 66.3
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 3.8e-27 125.9 97 67.0
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 3.8e-27 125.9 180 47.2
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 4.9e-27 125.6 91 69.2
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 6.5e-27 125.2 87 71.3
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 8.4e-27 124.8 97 66.0
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 1.4e-26 124.0 122 56.6
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 7.1e-26 121.7 97 64.9
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 9.3e-26 121.3 198 42.9
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 6.0e-25 118.6 87 67.8
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.0e-24 117.9 179 43.0
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 1.3e-24 117.5 168 49.4
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 1.3e-24 117.5 113 61.1
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 9.6e-23 111.3 71 81.7
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 9.6e-23 111.3 71 81.7
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 3.7e-22 109.4 180 44.4
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 2.0e-20 103.6 99 55.6
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 2.0e-20 103.6 202 44.6
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 2.9e-19 99.8 71 71.8
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 3.6e-17 92.8 71 67.6
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 3.0e-16 89.7 99 45.5
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 3.3e-15 86.3 103 46.6
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 1.3e-14 84.3 54 75.9
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 1.6e-14 84.0 138 43.5
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 5.0e-11 72.4 92 43.5
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.3e-08 63.5 48 62.5
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.7e-06 57.4 80 45.0


User provided reference genes

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