Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 8.7e-189 663.7 385 100.0
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 1.7e-107 393.7 367 63.2
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 3.3e-103 379.4 357 63.0
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 4.4e-92 342.4 351 61.0
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 1.3e-88 330.9 358 57.5
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 1.0e-80 304.7 364 54.4
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 6.2e-78 295.4 371 52.6
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 3.1e-77 293.1 365 54.0
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 3.1e-77 293.1 370 54.1
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 6.9e-77 292.0 357 53.2
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 2.0e-76 290.4 371 52.8
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 2.0e-76 290.4 357 52.9
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 2.6e-76 290.0 372 53.2
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 4.4e-76 289.3 361 54.3
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 7.6e-76 288.5 362 54.7
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 2.2e-75 287.0 372 51.1
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 2.9e-75 286.6 360 53.6
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 2.9e-75 286.6 369 53.1
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 8.4e-75 285.0 360 53.9
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 3.2e-74 283.1 368 51.4
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 5.4e-74 282.3 388 51.0
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 5.4e-74 282.3 357 51.5
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 9.3e-74 281.6 383 48.8
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 1.2e-73 281.2 357 51.3
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 2.7e-73 280.0 369 50.9
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 2.7e-73 280.0 380 50.3
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 6.0e-73 278.9 379 50.7
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 6.0e-73 278.9 357 52.1
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 1.3e-72 277.7 359 50.7
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 3.0e-72 276.6 361 51.2
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 3.9e-72 276.2 360 52.8
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 3.3e-71 273.1 361 52.4
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 9.6e-71 271.6 351 51.0
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 1.3e-70 271.2 358 51.4
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 3.6e-70 269.6 358 49.2
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 8.1e-70 268.5 366 49.2
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 1.4e-69 267.7 371 50.7
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 6.9e-69 265.4 362 51.4
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 2.0e-68 263.8 375 47.7
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 4.5e-68 262.7 357 50.1
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 4.5e-68 262.7 352 49.7
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 3.8e-67 259.6 364 48.1
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 6.4e-67 258.8 360 50.3
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 6.4e-67 258.8 385 48.3
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 1.1e-66 258.1 362 50.8
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 1.1e-66 258.1 360 50.3
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 2.7e-65 253.4 356 49.4
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 7.9e-65 251.9 346 49.7
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 8.7e-64 248.4 346 51.2
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 2.5e-63 246.9 430 43.3
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 1.3e-62 244.6 355 46.8
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.6e-62 244.2 404 46.0
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 2.8e-62 243.4 356 49.7
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 5.3e-61 239.2 346 50.3
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 1.2e-60 238.0 354 51.1
Sc12g0005950 Simmondsia chinensis HOM05D006327 ORTHO05D007952 4.5e-60 236.1 379 45.6
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 1.1e-58 231.5 349 47.9
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 7.9e-57 225.3 473 39.1
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 8.7e-56 221.9 352 46.6
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 3.3e-55 219.9 349 46.4
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 5.6e-55 219.2 349 46.4
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 1.3e-54 218.0 372 44.6
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 1.1e-53 214.9 377 43.5
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 5.8e-52 209.1 393 42.5
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 3.2e-50 203.4 364 44.0
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 2.7e-49 200.3 299 48.8
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 4.6e-49 199.5 308 46.8
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 1.0e-48 198.4 358 44.4
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 3.0e-48 196.8 357 45.4
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 4.3e-47 193.0 358 43.0
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 7.4e-47 192.2 426 38.7
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 2.8e-46 190.3 364 43.4
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 3.7e-46 189.9 358 43.9
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 4.8e-46 189.5 358 43.0
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 1.1e-45 188.3 358 42.2
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 1.1e-45 188.3 358 42.2
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 1.1e-45 188.3 298 47.7
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 2.4e-45 187.2 321 44.2
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 2.4e-45 187.2 376 41.2
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 5.3e-45 186.0 367 43.3
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 3.4e-44 183.3 404 38.1
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 7.6e-44 182.2 410 39.3
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 2.2e-43 180.6 363 41.9
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 2.2e-43 180.6 363 41.9
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 7.2e-42 175.6 341 40.8
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 5.1e-40 169.5 280 46.4
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 5.7e-39 166.0 366 38.5
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 1.3e-38 164.9 375 40.5
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 3.1e-37 160.2 294 44.9
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 8.5e-35 152.1 364 39.6
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 1.1e-34 151.8 298 40.6
Atru.chr9.2360 Acer truncatum HOM05D006327 ORTHO05D007952 5.7e-31 139.4 156 60.3
Os05g0220900 Oryza sativa ssp. japonica HOM05D006327 ORTHO05D007952 7.4e-31 139.0 354 35.9
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 4.1e-29 133.3 363 37.2
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 6.9e-29 132.5 362 37.3
Zm00001eb053670 Zea mays HOM05D006327 ORTHO05D007952 9.1e-29 132.1 350 36.9
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 1.2e-28 131.7 349 35.0
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 5.0e-27 126.3 381 37.0
SGA_v2.0_scaffold25G10883 Striga asiatica HOM05D006327 ORTHO05D007952 2.5e-26 124.0 354 35.9
CDE08G0244 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 7.2e-26 122.5 195 47.2
BcaB05g23082 Brassica carinata HOM05D006327 ORTHO05D007952 8.0e-25 119.0 325 36.9
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 3.7e-22 110.2 369 34.7
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 3.5e-20 103.6 372 33.6
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 2.2e-19 100.9 308 34.7
ATR0665G137 Amborella trichopoda HOM05D006327 ORTHO05D007952 1.5e-18 98.2 146 44.5
Cpa.g.sc939.1 Carica papaya HOM05D006327 ORTHO05D007952 9.7e-15 85.5 65 69.2
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 4.5e-12 76.6 48 81.2
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.0e-11 75.5 57 68.4
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 5.0e-11 73.2 88 52.3
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.5e-11 72.8 89 50.6
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.5e-11 72.8 89 50.6
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.5e-11 72.8 88 51.1
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.9e-10 71.2 53 71.7
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.9e-10 71.2 88 51.1
SMO361G0693 Selaginella moellendorffii HOM05D006327 ORTHO05D007952 2.1e-09 67.8 251 31.5
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.1e-09 66.2 88 47.7
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.8e-08 64.7 137 39.4
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 5.2e-08 63.2 209 35.4
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 1.5e-07 61.6 178 35.4
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 1.5e-07 61.6 64 51.6
MSTRG.11411 Avicennia marina HOM05D006327 ORTHO05D007952 1.7e-06 58.2 86 38.4


User provided reference genes

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