Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09330 Selenicereus undatus HOM05D002505 ORTHO05D006559 2.6e-241 838.6 502 100.0
AUR62011379 Chenopodium quinoa HOM05D002505 ORTHO05D006559 1.1e-130 471.1 504 61.3
EL10Ac5g10510 Beta vulgaris HOM05D002505 ORTHO05D006559 7.0e-130 468.4 531 56.7
Sc18g0006950 Simmondsia chinensis HOM05D002505 ORTHO05D006559 3.0e-125 453.0 506 60.1
Ah.09g227860 Amaranthus hybridus HOM05D002505 ORTHO05D006559 4.8e-115 419.1 507 50.5
AUR62016680 Chenopodium quinoa HOM05D002505 ORTHO05D006559 2.4e-114 416.8 495 54.3
AUR62002958 Chenopodium quinoa HOM05D002505 ORTHO05D006559 3.8e-112 409.5 441 54.4
AUR62007763 Chenopodium quinoa HOM05D002505 ORTHO05D006559 1.2e-110 404.4 442 54.1
Lj6g0017559 Lotus japonicus HOM05D002505 ORTHO05D006559 1.9e-95 354.0 532 46.6
TAR626G1844 Trochodendron aralioides HOM05D002505 ORTHO05D006559 9.5e-95 351.7 505 51.5
CSS0039073 Camellia sinensis var. sinensis HOM05D002505 ORTHO05D006559 1.5e-92 344.4 427 52.7
Nn4g25029 Nelumbo nucifera HOM05D002505 ORTHO05D006559 2.6e-92 343.6 455 50.3
Rhsim09G0088500 Rhododendron simsii HOM05D002505 ORTHO05D006559 2.9e-91 340.1 510 49.2
Cpa.g.sc77.87 Carica papaya HOM05D002505 ORTHO05D006559 9.2e-90 335.1 450 52.2
vmacro00789 Vaccinium macrocarpon HOM05D002505 ORTHO05D006559 2.1e-89 334.0 540 45.2
Dinv37391 Davidia involucrata HOM05D002505 ORTHO05D007115 4.6e-89 332.8 455 50.1
MELO3C016182.2 Cucumis melo HOM05D002505 ORTHO05D006559 3.9e-88 329.7 428 51.2
PGSC0003DMG400022499 Solanum tuberosum HOM05D002505 ORTHO05D006559 1.5e-87 327.8 417 55.6
Actinidia12750 Actinidia chinensis HOM05D002505 ORTHO05D006559 1.9e-87 327.4 419 52.3
TWI59G0446 Tripterygium wilfordii HOM05D002505 ORTHO05D006559 2.5e-87 327.0 457 48.8
CiPaw.15G113000 Carya illinoinensis HOM05D002505 ORTHO05D006559 9.5e-87 325.1 420 51.0
Sopen01g041610 Solanum pennellii HOM05D002505 ORTHO05D006559 1.6e-86 324.3 415 53.0
Solyc01g098030.4 Solanum lycopersicum HOM05D002505 ORTHO05D006559 3.1e-85 320.1 415 53.7
CsaV3_4G007590 Cucumis sativus L. HOM05D002505 ORTHO05D006559 4.0e-85 319.7 428 50.9
Sed0021026 Sechium edule HOM05D002505 ORTHO05D006559 1.5e-84 317.8 459 49.2
CSS0016681 Camellia sinensis var. sinensis HOM05D002505 ORTHO05D006559 2.0e-84 317.4 436 50.5
arahy.Tifrunner.gnm1.ann1.C6HHUS Arachis hypogaea HOM05D002505 ORTHO05D006559 7.5e-84 315.5 526 45.8
arahy.Tifrunner.gnm1.ann1.GJQ7VP Arachis hypogaea HOM05D002505 ORTHO05D006559 7.5e-84 315.5 526 45.8
arahy.Tifrunner.gnm1.ann1.91B0ED Arachis hypogaea HOM05D002505 ORTHO05D006559 1.7e-83 314.3 527 45.7
FAN25G1470 Fragaria x ananassa HOM05D002505 ORTHO05D006559 2.2e-83 313.9 437 52.6
Glyma.09G030100 Glycine max HOM05D002505 ORTHO05D006559 3.7e-83 313.2 432 49.5
RcHm_v2.0_Chr5g0023231 Rosa chinensis HOM05D002505 ORTHO05D006559 3.7e-83 313.2 405 57.5
CANSAT21G0880 Cannabis sativa HOM05D002505 ORTHO05D006559 6.4e-83 312.4 427 54.3
ClCG07G010710 Citrullus lanatus HOM05D002505 ORTHO05D006559 6.4e-83 312.4 503 45.5
MD05G1239100 Malus domestica HOM05D002505 ORTHO05D006559 6.4e-83 312.4 499 48.3
Potri.015G137000 Populus trichocarpa HOM05D002505 ORTHO05D006559 3.2e-82 310.1 477 47.2
Cc05_g16590 Coffea canephora HOM05D002505 ORTHO05D006559 7.1e-82 308.9 379 58.6
MD10G1217100 Malus domestica HOM05D002505 ORTHO05D006559 1.2e-81 308.1 528 47.2
Duzib168G0650 Durio zibethinus HOM05D002505 ORTHO05D006559 1.6e-81 307.8 518 47.3
Prupe.4G127000 Prunus persica HOM05D002505 ORTHO05D006559 3.5e-81 306.6 412 51.5
Peaxi162Scf00225g00129 Petunia axillaris HOM05D002505 ORTHO05D006559 4.6e-81 306.2 369 56.9
FAN16G0440 Fragaria x ananassa HOM05D002505 ORTHO05D006559 6.0e-81 305.8 458 48.9
Phvul.006G073200 Phaseolus vulgaris HOM05D002505 ORTHO05D006559 1.3e-80 304.7 532 48.1
FAN21G2970 Fragaria x ananassa HOM05D002505 ORTHO05D006559 1.7e-80 304.3 458 50.7
CAN.G134.186 Capsicum annuum HOM05D002505 ORTHO05D006559 1.1e-79 301.6 367 55.6
FvH4_3g14000 Fragaria vesca HOM05D002505 ORTHO05D006559 1.1e-79 301.6 406 53.2
Nitab4.5_0002840g0110 Nicotiana tabacum HOM05D002505 ORTHO05D006559 1.1e-79 301.6 337 60.2
VMungo1309G1878 Vigna mungo HOM05D002505 ORTHO05D006559 9.5e-79 298.5 434 50.5
Gohir.D13G211600 Gossypium hirsutum HOM05D002505 ORTHO05D006559 1.2e-78 298.1 490 47.3
MSTRG.14571 Avicennia marina HOM05D002505 ORTHO05D006559 1.6e-78 297.7 423 48.5
Phvul.006G122700 Phaseolus vulgaris HOM05D002505 ORTHO05D006559 1.6e-78 297.7 375 54.1
Gorai.013G241700 Gossypium raimondii HOM05D002505 ORTHO05D006559 8.1e-78 295.4 487 47.2
Gohir.A13G207000 Gossypium hirsutum HOM05D002505 ORTHO05D006559 1.8e-77 294.3 497 47.7
Atru.chr1.1039 Acer truncatum HOM05D002505 ORTHO05D006559 8.9e-77 292.0 433 52.2
Eucgr.D02598 Eucalyptus grandis HOM05D002505 ORTHO05D006559 1.2e-76 291.6 420 48.6
Rhsim06G0244600 Rhododendron simsii HOM05D002505 ORTHO05D006559 1.2e-76 291.6 502 44.6
Nitab4.5_0002361g0170 Nicotiana tabacum HOM05D002505 ORTHO05D006559 2.0e-76 290.8 339 62.2
VMungo0540G1128 Vigna mungo HOM05D002505 ORTHO05D006559 6.4e-75 285.8 393 51.9
Ca_18602_v3 Cicer arietinum L. HOM05D002505 ORTHO05D006559 1.1e-74 285.0 528 43.6
CDE05G0972 Ceratophyllum demersum HOM05D002505 ORTHO05D006559 2.4e-74 283.9 435 43.7
Oeu019749.1 Olea europaea HOM05D002505 ORTHO05D006559 5.4e-74 282.7 428 45.6
Thecc.09G195000 Theobroma cacao HOM05D002505 ORTHO05D006559 5.4e-74 282.7 339 53.7
Atru.chr3.1220 Acer truncatum HOM05D002505 ORTHO05D006559 1.6e-73 281.2 427 52.0
FAN11G2806 Fragaria x ananassa HOM05D002505 ORTHO05D006559 1.6e-73 281.2 512 45.1
AL1G62310 Arabidopsis lyrata HOM05D002505 ORTHO05D006559 2.7e-73 280.4 461 44.3
Lsat_1_v5_gn_5_3041 Lactuca sativa HOM05D002505 ORTHO05D006559 3.5e-73 280.0 479 50.5
ATR0057G033 Amborella trichopoda HOM05D002505 ORTHO05D006559 1.3e-72 278.1 430 44.9
Sabra15G0148600 Salix brachista HOM05D002505 ORTHO05D006559 1.3e-72 278.1 483 42.4
PGR102G1955 Punica granatum HOM05D002505 ORTHO05D006559 3.0e-72 276.9 444 41.4
CARHR043910 Cardamine hirsuta HOM05D002505 ORTHO05D006559 6.6e-72 275.8 556 41.4
SGA_v2.0_scaffold49G18207 Striga asiatica HOM05D002505 ORTHO05D006559 6.6e-72 275.8 427 46.6
Migut.H01653 Erythranthe guttata HOM05D002505 ORTHO05D006559 8.7e-72 275.4 344 57.0
AT1G53645 Arabidopsis thaliana HOM05D002505 ORTHO05D006559 5.6e-71 272.7 465 43.0
Manes.08G161700 Manihot esculenta HOM05D002505 ORTHO05D006559 1.2e-70 271.6 449 47.4
HPP92_002279 Vanilla planifolia HOM05D002505 ORTHO05D006559 1.2e-70 271.6 391 48.1
Ah.13g066500 Amaranthus hybridus HOM05D002505 ORTHO05D006559 4.7e-70 269.6 407 45.5
ECA246G4077 Erigeron canadensis HOM05D002505 ORTHO05D006559 1.4e-69 268.1 477 44.2
Carub.0001s4291 Capsella rubella HOM05D002505 ORTHO05D006559 1.8e-69 267.7 546 41.0
Sp1g40180 Schrenkiella parvula HOM05D002505 ORTHO05D006559 9.0e-69 265.4 451 45.0
Lalb_Chr20g0120281 Lupinus albus HOM05D002505 ORTHO05D006559 2.0e-68 264.2 508 43.1
Medtr8g078230 Medicago truncatula HOM05D002505 ORTHO05D006559 2.6e-68 263.8 192 67.7
GSVIVG01031552001 Vitis vinifera HOM05D002505 ORTHO05D006559 2.6e-68 263.8 192 66.1
PSO170G3666 Papaver somniferum HOM05D002505 ORTHO05D006559 7.6e-68 262.3 524 45.2
PSO017G2893 Papaver somniferum HOM05D002505 ORTHO05D006559 2.9e-67 260.4 526 44.5
THA.LOC104822601 Tarenaya hassleriana HOM05D002505 ORTHO05D006559 2.9e-67 260.4 430 43.5
HanXRQChr05g0159341 Helianthus annuus HOM05D002505 ORTHO05D006559 1.1e-66 258.5 308 54.9
BraA06t23318Z Brassica rapa HOM05D001023 ORTHO05D006559 3.2e-66 256.9 435 46.4
SHI32899 Sapria himalayana HOM05D002505 ORTHO05D006559 7.1e-66 255.8 415 41.4
BcaB02g10898 Brassica carinata HOM05D002505 ORTHO05D006559 3.5e-65 253.4 421 43.7
DCAR_009664 Daucus carota HOM05D002505 ORTHO05D006559 4.6e-65 253.1 448 51.3
Aa31LG10G1650 Aethionema arabicum HOM05D002505 ORTHO05D006559 1.0e-64 251.9 191 61.8
BcaB07g33312 Brassica carinata HOM05D002505 ORTHO05D006559 1.7e-64 251.1 192 63.0
A06p00890 Brassica napus HOM05D001023 ORTHO05D006559 2.3e-64 250.8 332 53.3
C06p09440 Brassica napus HOM05D001023 ORTHO05D006559 3.9e-64 250.0 333 51.7
Thhalv10011382m.g Eutrema salsugineum HOM05D002505 ORTHO05D006559 3.9e-64 250.0 448 42.2
CDE02G1608 Ceratophyllum demersum HOM05D002505 ORTHO05D006559 8.7e-64 248.8 445 40.4
BcaC08g43545 Brassica carinata HOM05D002505 ORTHO05D006559 5.6e-63 246.1 433 44.1
BolC6t36013H Brassica oleracea HOM05D001023 ORTHO05D006559 9.6e-63 245.4 433 44.1
Zm00001eb060430 Zea mays HOM05D002505 ORTHO05D006559 2.8e-62 243.8 441 40.8
Aqoxy1G00117 Aquilegia oxysepala HOM05D002505 ORTHO05D006559 4.8e-62 243.0 442 42.1
Os06g0664400 Oryza sativa ssp. japonica HOM05D002505 ORTHO05D006559 1.3e-59 235.0 387 42.9
Psat4g091000 Pisum sativum HOM05D002505 ORTHO05D006559 3.8e-59 233.4 422 42.7
Lj1C206G15 Lonicera japonica HOM05D002505 ORTHO05D006559 3.2e-58 230.3 165 67.9
Ciclev10019766m.g Citrus clementina HOM05D002505 ORTHO05D006559 3.0e-56 223.8 386 47.9
unitig_21.g20249 Utricularia gibba HOM05D002505 ORTHO05D006559 9.6e-55 218.8 195 56.4
BolC6t36693H Brassica oleracea HOM05D002505 ORTHO05D006559 3.1e-53 213.8 174 60.3
Dinv17234 Davidia involucrata HOM05D002505 ORTHO05D006559 2.0e-52 211.1 367 43.1
QL04p094522 Quercus lobata HOM05D002505 ORTHO05D000632 1.9e-47 194.5 336 50.3
C06p15180 Brassica napus HOM05D002505 ORTHO05D006559 4.3e-47 193.4 139 67.6
A05p18000 Brassica napus HOM05D002505 ORTHO05D006559 6.9e-45 186.0 177 54.2
BraA05t20694Z Brassica rapa HOM05D002505 ORTHO05D006559 6.9e-45 186.0 177 54.2
Haze_18498 Corylus avellana HOM05D002505 ORTHO05D006559 1.0e-43 182.2 326 50.0
Thhalv10012156m.g Eutrema salsugineum HOM05D002505 ORTHO05D006559 2.6e-36 157.5 107 67.3
BcaC08g44112 Brassica carinata HOM05D002505 ORTHO05D006559 2.9e-35 154.1 139 58.3
Ah.07g202770 Amaranthus hybridus HOM05D002505 ORTHO05D006559 1.5e-31 141.7 91 74.7
Glyma.15G135900 Glycine max HOM05D002505 ORTHO05D006559 5.7e-31 139.8 124 57.3
CSS0015020 Camellia sinensis var. sinensis HOM05D002505 ORTHO05D006559 5.3e-29 133.3 295 42.4
Dinv29488 Davidia involucrata HOM05D002505 ORTHO05D006559 1.5e-28 131.7 90 71.1
Mapoly0043s0004 Marchantia polymorpha HOM05D002505 ORTHO05D006559 3.6e-25 120.6 180 35.6
AagrBONN_evm.TU.Sc2ySwM_228.276 Anthoceros agrestis HOM05D002505 ORTHO05D006559 7.0e-21 106.3 147 35.4
Pp3c12_26140 Physcomitrium patens HOM05D002505 ORTHO05D006559 1.2e-20 105.5 170 35.9
Actinidia26206 Actinidia chinensis HOM05D002505 ORTHO05D006559 1.7e-19 101.7 75 70.7
Haze_18499 Corylus avellana HOM05D002505 ORTHO05D006559 6.5e-19 99.8 60 80.0
Ah.13g066490 Amaranthus hybridus HOM05D002505 ORTHO05D006559 7.2e-18 96.3 63 76.2
RcHm_v2.0_Chr5g0023281 Rosa chinensis HOM05D002505 ORTHO05D006559 1.2e-17 95.5 61 78.7
QL04p094482 Quercus lobata HOM05D000280 ORTHO05D006559 2.3e-16 91.3 60 75.0
SEGI_13390 Sequoiadendron giganteum HOM05D002505 ORTHO05D006559 1.1e-13 82.4 82 43.9
Sopen01g041600 Solanum pennellii HOM05D002505 ORTHO05D006559 7.2e-10 69.7 173 34.7
COL.COLO4_21461 Corchorus olitorius HOM05D002505 ORTHO05D006559 1.6e-09 68.6 299 34.4
Actinidia26205 Actinidia chinensis HOM05D002505 ORTHO05D006559 3.4e-07 60.8 264 26.9


User provided reference genes

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