Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.4e-60 236.1 118 100.0
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.6e-40 169.5 81 100.0
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 1.4e-36 156.4 83 84.3
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 2.3e-36 155.6 99 78.8
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 4.0e-36 154.8 100 79.0
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 5.2e-36 154.5 83 85.5
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 6.8e-36 154.1 82 86.6
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 1.2e-35 153.3 82 86.6
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 1.5e-35 152.9 82 85.4
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 3.4e-35 151.8 82 85.4
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 3.4e-35 151.8 82 86.6
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 4.4e-35 151.4 81 86.4
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 5.8e-35 151.0 82 85.4
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 5.8e-35 151.0 83 83.1
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 9.9e-35 150.2 82 84.1
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 9.9e-35 150.2 82 85.4
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 9.9e-35 150.2 81 85.2
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 9.9e-35 150.2 82 84.1
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 9.9e-35 150.2 82 84.1
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 1.3e-34 149.8 82 85.4
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 1.7e-34 149.4 82 84.1
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 1.7e-34 149.4 82 82.9
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 2.2e-34 149.1 82 84.1
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 2.9e-34 148.7 83 81.9
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 2.9e-34 148.7 82 82.9
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 3.8e-34 148.3 82 82.9
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 3.8e-34 148.3 82 82.9
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 3.8e-34 148.3 82 81.7
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 6.4e-34 147.5 83 81.9
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 6.4e-34 147.5 83 80.7
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 8.4e-34 147.1 81 82.7
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 1.1e-33 146.7 83 80.7
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 1.4e-33 146.4 82 81.7
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 1.4e-33 146.4 82 80.5
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 1.9e-33 146.0 83 78.3
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 4.1e-33 144.8 82 79.3
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 4.1e-33 144.8 81 80.2
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 5.4e-33 144.4 83 77.1
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 7.1e-33 144.1 83 77.1
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 9.2e-33 143.7 82 80.5
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 9.2e-33 143.7 82 80.5
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 9.2e-33 143.7 81 81.5
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 1.2e-32 143.3 81 79.0
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.6e-32 142.9 82 80.5
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 2.1e-32 142.5 81 77.8
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 2.1e-32 142.5 80 81.2
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.1e-32 142.5 82 80.5
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.1e-32 142.5 82 80.5
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.1e-32 142.5 82 80.5
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 2.1e-32 142.5 82 80.5
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 2.7e-32 142.1 81 77.8
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 2.7e-32 142.1 81 77.8
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 2.7e-32 142.1 82 79.3
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 2.7e-32 142.1 83 77.1
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 3.5e-32 141.7 83 77.1
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 4.6e-32 141.4 82 80.5
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 6.0e-32 141.0 83 75.9
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 6.0e-32 141.0 83 75.9
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 6.0e-32 141.0 82 75.6
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 6.0e-32 141.0 82 79.3
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 7.8e-32 140.6 81 76.5
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 7.8e-32 140.6 81 76.5
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 7.8e-32 140.6 82 79.3
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 1.0e-31 140.2 83 77.1
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 1.0e-31 140.2 82 79.3
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 1.0e-31 140.2 82 80.5
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 1.3e-31 139.8 81 76.5
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 1.3e-31 139.8 81 76.5
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.3e-31 139.8 82 79.3
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 1.7e-31 139.4 81 75.3
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 2.3e-31 139.0 81 74.1
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 3.0e-31 138.7 80 80.0
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 3.0e-31 138.7 80 80.0
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 3.0e-31 138.7 81 75.3
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 3.0e-31 138.7 83 75.9
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 3.9e-31 138.3 81 75.3
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 3.9e-31 138.3 82 78.0
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 5.1e-31 137.9 81 75.3
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 5.1e-31 137.9 82 76.8
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 5.1e-31 137.9 82 76.8
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 6.6e-31 137.5 81 74.1
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 6.6e-31 137.5 83 79.5
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 1.1e-30 136.7 82 76.8
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 1.9e-30 136.0 82 75.6
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 3.3e-30 135.2 82 76.8
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 3.3e-30 135.2 82 76.8
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 4.3e-30 134.8 82 76.8
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 5.6e-30 134.4 82 73.2
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 8.1e-29 130.6 81 70.4
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 1.1e-28 130.2 83 71.1
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 3.1e-28 128.6 81 75.3
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 2.6e-27 125.6 89 65.2
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 2.6e-27 125.6 81 69.1
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 7.6e-27 124.0 83 72.3
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 2.9e-26 122.1 81 66.7
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 5.4e-25 117.9 82 70.7
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 2.1e-24 115.9 68 80.9
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.3e-23 112.5 138 47.1
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 8.4e-18 94.0 60 70.0
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 8.4e-18 94.0 54 77.8
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 5.4e-17 91.3 68 57.4
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 1.0e-15 87.0 77 45.5
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 1.1e-14 83.6 54 70.4
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 6.9e-12 74.3 78 39.7


User provided reference genes

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