Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 0.0e+00 1609.3 851 100.0
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 0.0e+00 1195.3 855 74.5
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 0.0e+00 1193.3 855 74.4
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 0.0e+00 1160.2 856 73.4
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 0.0e+00 1121.3 855 71.5
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 1.2e-286 989.9 856 64.5
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 2.3e-266 922.5 849 60.0
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 7.6e-262 907.5 825 60.4
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 1.1e-257 893.6 855 60.6
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 8.4e-253 877.5 851 57.9
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 7.1e-252 874.4 860 57.0
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 7.9e-251 870.9 860 57.2
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.0e-250 869.0 859 57.2
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 5.1e-250 868.2 861 57.5
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 1.1e-249 867.1 829 58.5
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 9.7e-249 864.0 860 57.0
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 3.4e-246 855.5 860 57.2
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.1e-244 850.5 864 56.1
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.4e-244 850.1 860 56.4
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 1.4e-244 850.1 870 56.8
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.2e-243 847.0 864 56.0
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 2.7e-243 845.9 856 56.3
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.0e-242 844.0 865 54.7
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 8.8e-242 840.9 836 57.2
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 8.8e-242 840.9 853 56.4
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 8.8e-242 840.9 860 56.0
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.5e-241 840.1 864 55.9
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.0e-241 839.7 860 55.8
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 2.5e-241 839.3 856 56.1
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 8.2e-240 834.3 856 56.0
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.8e-239 833.2 827 57.3
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 2.4e-239 832.8 859 56.5
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 4.1e-239 832.0 856 56.2
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 9.1e-239 830.9 862 56.6
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.2e-238 830.5 851 55.7
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 2.6e-238 829.3 860 56.2
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 2.9e-237 825.9 858 55.8
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 6.5e-237 824.7 856 55.5
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 7.2e-236 821.2 857 55.5
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 8.8e-234 814.3 851 54.6
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.7e-233 811.6 863 54.1
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 4.1e-231 805.4 984 50.0
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 9.1e-231 804.3 861 53.7
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 1.2e-230 803.9 852 53.9
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 1.5e-230 803.5 861 53.5
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 5.9e-230 801.6 862 53.2
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 7.7e-230 801.2 892 52.8
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 2.2e-229 799.7 853 55.6
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.5e-228 796.2 862 53.5
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 1.2e-227 793.9 856 53.7
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 1.2e-227 793.9 860 53.5
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 2.7e-227 792.7 861 53.7
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 2.7e-227 792.7 863 53.5
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 2.7e-227 792.7 860 53.7
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 1.0e-226 790.8 866 53.0
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 1.0e-226 790.8 855 53.5
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 1.8e-226 790.0 862 54.1
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 5.2e-226 788.5 855 53.0
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 5.7e-225 785.0 858 52.8
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 9.7e-225 784.3 798 55.5
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 6.5e-221 771.5 834 54.2
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 8.5e-221 771.2 847 53.5
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 4.2e-220 768.8 847 54.1
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 6.1e-219 765.0 825 53.0
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 8.0e-219 764.6 975 49.0
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 5.2e-218 761.9 845 53.4
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 3.3e-217 759.2 1004 46.5
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 1.1e-215 754.2 844 51.7
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 1.4e-215 753.8 711 58.2
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 4.1e-215 752.3 831 52.2
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 2.7e-214 749.6 831 51.9
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 1.0e-213 747.7 854 52.2
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 1.7e-213 746.9 843 52.1
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.9e-213 746.1 843 52.1
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 4.2e-212 742.3 836 51.0
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 1.2e-211 740.7 886 50.5
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.7e-211 739.6 843 51.6
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 6.1e-211 738.4 843 51.4
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 1.0e-210 737.6 845 51.5
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 8.8e-210 734.6 852 51.8
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 2.0e-209 733.4 854 49.9
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 3.4e-209 732.6 863 50.5
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 2.8e-208 729.6 839 50.8
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 2.7e-206 723.0 855 50.8
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 4.2e-204 715.7 853 50.3
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 7.2e-204 714.9 827 51.4
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 1.2e-201 707.6 863 50.8
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 2.6e-201 706.4 865 50.2
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 4.4e-201 705.7 701 55.6
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 3.7e-200 702.6 891 48.3
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 1.2e-198 697.6 848 48.9
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 1.3e-197 694.1 875 49.3
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 5.0e-197 692.2 857 50.1
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 4.4e-193 679.1 854 47.7
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 1.7e-189 667.2 853 47.2
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 2.3e-189 666.8 676 57.4
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.9e-188 663.7 834 49.0
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 5.6e-188 662.1 841 47.3
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 1.6e-187 660.6 645 57.7
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 2.1e-187 660.2 860 47.3
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.4e-186 657.5 864 47.3
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 1.5e-185 654.1 836 47.4
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 6.4e-184 648.7 648 56.5
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 2.7e-182 643.3 832 48.1
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 3.5e-182 642.9 929 44.0
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 3.0e-181 639.8 713 52.7
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 8.6e-181 638.3 990 42.8
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.1e-180 637.9 647 55.5
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 1.2e-179 634.4 845 46.2
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 2.1e-179 633.6 843 46.4
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 8.9e-178 628.2 829 47.4
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 7.1e-175 618.6 858 45.3
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 9.2e-175 618.2 842 45.0
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 1.6e-174 617.5 844 44.7
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 2.1e-174 617.1 840 45.4
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 6.0e-174 615.5 856 44.0
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 1.0e-173 614.8 827 45.5
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 1.3e-173 614.4 846 44.2
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.1e-172 611.3 642 54.4
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 1.5e-172 610.9 826 45.3
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 5.6e-172 609.0 840 45.2
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.6e-171 607.4 589 58.4
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 4.0e-170 602.8 841 44.5
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 1.2e-169 601.3 843 45.2
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 4.2e-167 592.8 843 44.8
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 7.8e-166 588.6 829 44.8
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 1.0e-165 588.2 843 45.1
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.0e-165 588.2 691 50.9
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 1.4e-159 567.8 846 42.2
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 6.0e-158 562.4 833 43.6
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 3.0e-157 560.1 653 49.9
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.9e-156 557.4 862 41.2
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 1.3e-152 544.7 828 42.5
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 7.9e-150 535.4 897 41.5
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 1.6e-147 527.7 650 48.8
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 3.1e-138 496.9 895 38.4
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 7.1e-135 485.7 547 51.0
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 2.6e-129 467.2 827 40.3
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 5.0e-120 436.4 592 46.1
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 6.5e-120 436.0 573 46.8
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 4.2e-119 433.3 794 39.0
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 1.4e-117 428.3 821 37.5
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.3e-115 421.8 844 36.3
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 6.5e-112 409.5 659 42.6
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.1e-111 408.7 828 35.3
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 7.5e-100 369.4 437 50.3
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 5.9e-97 359.8 781 33.8
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 1.4e-93 348.6 468 46.6
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 2.9e-75 287.7 818 31.9
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.3e-69 268.1 435 43.2
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 3.7e-59 234.2 332 44.9
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 4.6e-57 227.3 791 28.4
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 3.3e-47 194.5 316 41.5
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 9.9e-44 183.0 270 43.7
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.7e-43 182.2 330 38.5
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.1e-42 179.5 161 57.8
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.4e-42 179.1 192 51.6
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 6.6e-40 170.2 222 45.9
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 8.7e-40 169.9 154 61.0
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 9.6e-39 166.4 123 63.4
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 3.1e-37 161.4 193 46.1
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.5e-31 142.5 247 39.3
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.9e-31 142.1 194 41.2
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 2.8e-30 138.3 305 33.8
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 7.6e-28 130.2 120 59.2
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.9e-26 125.6 133 54.9
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 8.2e-22 110.2 146 47.9
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.4e-21 109.4 115 49.6
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.8e-21 109.0 112 54.5
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.4e-18 99.4 122 41.8
HPP92_000472 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.4e-18 99.4 161 43.5
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.3e-16 92.8 109 49.5
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 3.0e-16 91.7 113 48.7
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.9e-15 89.0 149 37.6
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 2.8e-14 85.1 121 44.6
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 8.2e-14 83.6 100 48.0
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 6.9e-13 80.5 100 47.0
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.0e-12 79.0 73 53.4
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 2.2e-11 75.5 51 70.6
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.9e-08 64.7 150 32.7
MBI13_g02371_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D000708 3.3e-07 61.6 67 52.2
CBR_g27932 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-06 59.7 74 41.9
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 2.2e-06 58.9 48 56.2
MBI13_g36809_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D240810 3.7e-06 58.2 44 59.1
MD02G1023900 Malus domestica HOM05D003622 ORTHO05D048666 8.2e-06 57.0 89 40.4


User provided reference genes

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