Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 2.5e-117 425.6 241 100.0
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 5.1e-62 241.9 239 63.6
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 4.0e-59 232.3 176 75.0
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 4.0e-59 232.3 241 58.9
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 4.0e-59 232.3 257 59.1
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 4.9e-57 225.3 241 57.3
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 4.2e-56 222.2 174 73.0
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 5.5e-56 221.9 236 58.5
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 5.5e-56 221.9 242 54.1
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 2.1e-55 219.9 201 60.7
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.1e-55 219.9 241 58.5
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 2.7e-55 219.5 226 56.2
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 2.7e-55 219.5 246 55.7
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 3.5e-55 219.2 241 56.8
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 6.0e-55 218.4 242 60.3
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 6.0e-55 218.4 176 66.5
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 1.0e-54 217.6 206 60.2
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 1.8e-54 216.9 242 56.6
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 2.3e-54 216.5 234 56.4
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 3.0e-54 216.1 184 64.1
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 3.0e-54 216.1 243 54.3
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 3.0e-54 216.1 237 55.3
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 3.0e-54 216.1 193 63.2
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 3.9e-54 215.7 242 57.0
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 3.9e-54 215.7 241 55.2
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 3.9e-54 215.7 241 53.5
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 5.1e-54 215.3 242 52.9
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 5.1e-54 215.3 177 67.2
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 6.7e-54 214.9 178 67.4
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 6.7e-54 214.9 242 57.0
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.5e-53 213.8 177 66.1
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 2.5e-53 213.0 241 53.9
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 2.5e-53 213.0 195 62.6
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 4.3e-53 212.2 193 63.2
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 4.3e-53 212.2 242 53.7
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 5.6e-53 211.8 201 58.7
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 7.4e-53 211.5 201 58.7
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 7.4e-53 211.5 177 66.1
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 9.6e-53 211.1 207 58.9
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 1.3e-52 210.7 176 64.2
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.3e-52 210.7 176 64.2
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 2.1e-52 209.9 242 53.7
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 2.8e-52 209.5 241 53.5
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 3.7e-52 209.1 208 58.7
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 3.7e-52 209.1 175 64.6
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 3.7e-52 209.1 240 52.1
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 3.7e-52 209.1 241 52.3
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 4.8e-52 208.8 174 63.8
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 4.8e-52 208.8 177 64.4
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 6.2e-52 208.4 246 52.4
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 6.2e-52 208.4 193 59.6
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 1.1e-51 207.6 245 54.3
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 1.1e-51 207.6 241 53.5
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 1.4e-51 207.2 241 51.9
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.4e-51 207.2 189 63.0
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 1.8e-51 206.8 174 67.8
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 1.8e-51 206.8 174 64.4
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 1.8e-51 206.8 174 64.4
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 2.4e-51 206.5 245 54.3
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 1.2e-50 204.1 242 53.7
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 1.5e-50 203.8 189 59.8
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 1.5e-50 203.8 174 62.1
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.5e-50 203.8 231 53.7
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 2.6e-50 203.0 242 51.2
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.0e-49 201.1 231 53.7
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 1.0e-49 201.1 170 66.5
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 2.2e-49 199.9 182 61.5
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 8.4e-49 198.0 182 61.5
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 8.4e-49 198.0 259 49.8
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 8.4e-49 198.0 189 59.8
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.1e-48 197.6 179 62.0
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.4e-48 197.2 179 62.0
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 1.4e-48 197.2 147 71.4
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 1.4e-48 197.2 200 58.5
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 1.9e-48 196.8 223 52.9
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 3.2e-48 196.1 179 61.5
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.2e-48 196.1 179 61.5
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 7.1e-48 194.9 172 62.8
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 7.1e-48 194.9 177 61.6
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 7.1e-48 194.9 234 50.9
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.6e-47 193.7 176 60.8
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 1.6e-47 193.7 174 61.5
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 2.1e-47 193.4 169 61.5
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.7e-47 193.0 147 71.4
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 3.5e-47 192.6 240 52.1
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 3.5e-47 192.6 182 61.0
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 3.5e-47 192.6 240 52.1
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 3.5e-47 192.6 237 50.2
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 4.6e-47 192.2 233 50.2
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 4.6e-47 192.2 177 61.0
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 6.0e-47 191.8 145 71.0
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 2.3e-46 189.9 147 68.7
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 3.0e-46 189.5 234 52.1
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 8.7e-46 188.0 176 64.2
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 1.5e-45 187.2 179 59.8
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 1.9e-45 186.8 147 66.7
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 2.5e-45 186.4 174 59.8
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 3.3e-45 186.0 147 66.7
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 3.3e-45 186.0 196 55.1
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 5.7e-45 185.3 204 54.4
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 7.4e-45 184.9 134 73.1
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 9.6e-45 184.5 175 58.9
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 9.0e-43 177.9 174 59.2
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 1.5e-42 177.2 187 56.1
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.0e-41 174.5 145 64.1
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 1.3e-41 174.1 165 58.2
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 1.6e-39 167.2 198 51.5
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 5.9e-34 148.7 142 57.7
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 7.7e-34 148.3 140 60.7
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 7.7e-34 148.3 183 52.5
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.1e-32 144.4 204 46.6
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 1.0e-30 137.9 204 46.1
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.1e-29 134.4 181 44.2
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 5.7e-29 132.1 126 55.6
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.7e-28 130.6 144 50.0
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 6.3e-28 128.6 126 54.0
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 9.1e-27 124.8 119 57.1
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.7e-25 120.6 177 42.9
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 2.1e-23 113.6 145 45.5
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 6.7e-22 108.6 104 51.9
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 6.3e-20 102.1 75 69.3
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 5.5e-16 89.0 106 46.2
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 2.1e-15 87.0 139 40.3
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.5e-09 65.5 71 50.7
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 4.2e-08 62.8 69 55.1


User provided reference genes

Program Settings