Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 9.2e-153 543.5 270 100.0
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 7.4e-86 321.2 267 61.8
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 2.0e-83 313.2 267 60.3
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 1.4e-79 300.4 260 62.3
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 6.7e-79 298.1 264 61.0
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 2.0e-78 296.6 264 60.6
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 2.2e-77 293.1 272 61.8
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 3.1e-76 289.3 264 61.0
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 2.0e-75 286.6 269 58.7
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 2.2e-74 283.1 260 60.4
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 1.1e-73 280.8 228 64.9
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 1.1e-73 280.8 262 59.9
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 1.1e-73 280.8 268 57.8
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 2.5e-73 279.6 267 57.7
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 5.5e-73 278.5 275 58.5
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 1.6e-72 276.9 268 58.6
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 1.6e-72 276.9 262 57.3
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.1e-72 276.6 267 58.1
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 6.1e-72 275.0 273 57.9
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 5.1e-71 271.9 267 55.4
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 5.1e-71 271.9 267 57.3
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 5.1e-71 271.9 263 58.6
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 1.1e-70 270.8 249 60.2
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 2.6e-70 269.6 273 56.8
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 4.4e-70 268.9 243 61.3
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 4.4e-70 268.9 267 56.9
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 9.7e-70 267.7 267 56.6
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 1.7e-69 266.9 263 57.0
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 3.7e-69 265.8 267 56.6
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 2.4e-68 263.1 239 59.4
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 2.4e-68 263.1 221 63.8
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 3.1e-68 262.7 267 54.3
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 3.1e-68 262.7 265 55.8
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 4.1e-68 262.3 244 59.8
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 4.1e-68 262.3 273 54.6
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 9.1e-68 261.2 269 55.0
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 1.2e-67 260.8 226 61.9
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 1.5e-67 260.4 231 60.6
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 4.5e-67 258.8 280 55.7
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 7.7e-67 258.1 269 54.3
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 7.7e-67 258.1 269 54.3
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 1.0e-66 257.7 274 54.4
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 1.3e-66 257.3 230 57.8
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 2.2e-66 256.5 268 54.1
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 5.0e-66 255.4 268 55.6
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 8.5e-66 254.6 258 54.3
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 1.1e-65 254.2 255 55.3
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 1.1e-65 254.2 236 58.1
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 2.5e-65 253.1 258 54.7
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 9.4e-65 251.1 244 56.6
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 3.6e-64 249.2 258 53.1
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 8.0e-64 248.1 253 51.8
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 8.0e-64 248.1 265 54.7
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 1.8e-63 246.9 259 54.8
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 2.3e-63 246.5 259 54.8
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 3.0e-63 246.1 232 58.6
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 4.0e-63 245.7 255 51.8
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 5.2e-63 245.4 261 53.6
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 8.8e-63 244.6 216 60.2
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 1.1e-62 244.2 263 55.1
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 1.1e-62 244.2 260 52.3
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 1.5e-62 243.8 259 54.8
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 4.4e-62 242.3 227 57.7
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 9.7e-62 241.1 237 54.9
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 1.7e-61 240.4 253 50.6
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 2.4e-60 236.5 258 50.8
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 2.4e-60 236.5 269 49.8
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 3.1e-60 236.1 268 51.5
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 4.1e-60 235.7 254 52.8
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 2.6e-59 233.0 258 52.7
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 3.5e-59 232.6 227 55.9
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 4.5e-59 232.3 217 59.4
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 8.5e-58 228.0 249 53.8
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 8.5e-58 228.0 274 48.5
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 8.5e-58 228.0 274 48.5
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 8.5e-58 228.0 248 52.8
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 1.5e-57 227.3 262 48.9
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 2.5e-57 226.5 216 57.4
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 7.2e-57 224.9 247 53.8
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 2.1e-56 223.4 267 49.8
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 6.8e-55 218.4 255 49.8
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 2.6e-54 216.5 313 45.7
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 3.4e-54 216.1 236 53.4
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 2.8e-53 213.0 270 49.3
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 5.4e-52 208.8 221 56.1
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 7.0e-52 208.4 215 53.5
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 2.7e-51 206.5 253 51.8
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 3.8e-50 202.6 217 52.1
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 3.8e-50 202.6 201 54.2
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 6.5e-50 201.8 201 53.7
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 6.5e-50 201.8 201 53.7
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 3.2e-49 199.5 201 53.2
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 4.2e-49 199.1 231 50.2
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 9.4e-49 198.0 237 48.9
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 9.4e-49 198.0 237 48.9
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 1.2e-48 197.6 228 52.6
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 1.6e-48 197.2 228 52.6
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 8.8e-47 191.4 212 51.4
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 1.2e-46 191.0 229 48.9
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 2.0e-46 190.3 271 43.2
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 2.8e-45 186.4 227 48.5
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 6.3e-45 185.3 240 46.2
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 1.4e-44 184.1 216 51.9
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 1.8e-44 183.7 234 47.9
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 2.4e-44 183.3 233 47.2
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 3.1e-44 183.0 247 44.9
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 1.0e-42 177.9 166 57.2
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 1.1e-41 174.5 230 47.4
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 1.1e-41 174.5 348 37.1
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 1.0e-39 167.9 148 58.1
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 2.0e-38 163.7 111 72.1
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 1.1e-36 157.9 101 80.2
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 3.5e-35 152.9 225 43.6
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 5.2e-31 139.0 105 67.6
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 2.6e-30 136.7 162 47.5
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 4.1e-28 129.4 182 45.6
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 1.5e-25 120.9 73 80.8
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 7.3e-25 118.6 87 71.3
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 1.6e-24 117.5 158 46.8
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 5.8e-22 109.0 230 35.7
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 7.5e-22 108.6 206 36.4
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 2.9e-21 106.7 182 36.3
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 1.9e-20 104.0 133 46.6
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 3.2e-20 103.2 77 66.2
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 1.7e-18 97.4 206 34.0
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 1.7e-18 97.4 136 44.9
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 7.3e-17 92.0 54 83.3
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 4.7e-16 89.4 63 66.7
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 2.3e-15 87.0 48 89.6
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 2.1e-08 63.9 66 47.0
CARHR102160 Cardamine hirsuta HOM05D005913 ORTHO05D007138 8.1e-08 62.0 88 46.6
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-07 61.6 127 33.1
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 9.9e-06 55.1 99 32.3


User provided reference genes

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