Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 1.1e-56 223.0 108 100.0
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 1.2e-34 149.8 96 67.7
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.1e-32 143.3 98 66.3
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 2.1e-31 139.0 98 62.2
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 2.1e-31 139.0 98 62.2
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 6.1e-31 137.5 98 63.3
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 2.3e-30 135.6 98 61.2
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 5.1e-30 134.4 98 61.2
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 1.1e-29 133.3 98 60.2
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 2.5e-29 132.1 99 60.6
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 4.3e-29 131.3 98 56.1
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 1.3e-28 129.8 98 57.1
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 1.3e-28 129.8 97 56.7
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 1.7e-28 129.4 101 58.4
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 2.8e-28 128.6 99 56.6
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 3.7e-28 128.3 98 55.1
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 3.7e-28 128.3 98 55.1
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 3.7e-28 128.3 98 60.2
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 3.7e-28 128.3 98 54.1
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 6.3e-28 127.5 98 55.1
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 6.3e-28 127.5 98 55.1
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 6.3e-28 127.5 98 56.1
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 8.2e-28 127.1 98 56.1
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 8.2e-28 127.1 98 56.1
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 1.1e-27 126.7 97 54.6
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 1.1e-27 126.7 96 59.4
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 1.1e-27 126.7 96 59.4
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 1.1e-27 126.7 98 55.1
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 1.4e-27 126.3 98 56.1
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.4e-27 126.3 97 57.7
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.8e-27 125.9 98 55.1
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 2.4e-27 125.6 87 63.2
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 4.1e-27 124.8 97 54.6
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 4.1e-27 124.8 97 52.6
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 4.1e-27 124.8 101 53.5
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 5.3e-27 124.4 98 54.1
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 5.3e-27 124.4 96 55.2
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 5.3e-27 124.4 98 55.1
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 9.1e-27 123.6 97 53.6
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 1.2e-26 123.2 90 61.1
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 1.2e-26 123.2 98 56.1
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.2e-26 123.2 89 60.7
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.2e-26 123.2 97 51.5
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 1.5e-26 122.9 97 54.6
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 2.0e-26 122.5 90 60.0
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 2.0e-26 122.5 90 60.0
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 3.4e-26 121.7 101 53.5
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 3.4e-26 121.7 97 53.6
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 4.5e-26 121.3 98 53.1
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 5.9e-26 120.9 98 54.1
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.3e-25 119.8 98 52.0
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 1.3e-25 119.8 91 60.4
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.7e-25 119.4 81 64.2
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 2.2e-25 119.0 97 52.6
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 2.2e-25 119.0 97 52.6
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 2.9e-25 118.6 98 53.1
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 3.8e-25 118.2 85 58.8
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 3.8e-25 118.2 97 51.5
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 3.8e-25 118.2 98 53.1
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 3.8e-25 118.2 98 53.1
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 3.8e-25 118.2 98 53.1
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 3.8e-25 118.2 98 53.1
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 5.0e-25 117.9 97 51.5
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 5.0e-25 117.9 98 53.1
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 6.5e-25 117.5 97 53.6
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 1.4e-24 116.3 98 52.0
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 1.9e-24 115.9 90 57.8
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 3.2e-24 115.2 98 52.0
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 4.2e-24 114.8 100 54.0
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 5.5e-24 114.4 96 51.0
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 2.1e-23 112.5 96 52.1
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 4.7e-23 111.3 92 52.2
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 6.1e-23 110.9 97 48.5
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 6.1e-23 110.9 97 48.5
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 7.9e-23 110.5 103 49.5
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 1.4e-22 109.8 98 48.0
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.4e-22 109.8 81 61.7
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 1.4e-22 109.8 91 52.7
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 1.8e-22 109.4 97 51.5
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 2.0e-21 105.9 62 67.7
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 9.7e-21 103.6 98 48.0
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.3e-20 103.2 98 48.0
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 1.3e-20 103.2 97 47.4
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 2.8e-20 102.1 102 44.1
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 2.8e-20 102.1 102 44.1
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 4.8e-20 101.3 98 45.9
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 6.3e-20 100.9 98 48.0
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 8.2e-20 100.5 95 46.3
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 1.4e-19 99.8 105 45.7
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.8e-19 99.4 97 45.4
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 3.1e-19 98.6 91 48.4
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 4.1e-19 98.2 96 43.8
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 6.9e-19 97.4 98 48.0
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 2.0e-18 95.9 58 63.8
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 3.4e-18 95.1 111 44.1
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 7.7e-18 94.0 71 56.3
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 1.3e-17 93.2 98 45.9
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 1.3e-17 93.2 95 46.3
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 2.9e-17 92.0 94 45.7
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 3.8e-17 91.7 46 73.9
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 5.0e-17 91.3 46 78.3
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 6.5e-17 90.9 54 64.8
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 8.5e-17 90.5 51 68.6
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 1.4e-16 89.7 96 49.0
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 1.4e-16 89.7 88 40.9
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 4.2e-16 88.2 91 44.0
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 1.1e-13 80.1 84 42.9
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 3.3e-13 78.6 97 39.2
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 1.6e-07 59.7 77 36.4
MCO14G029 Micromonas commoda HOM05D007077 ORTHO05D008853 3.6e-07 58.5 83 36.1


User provided reference genes

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