Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09124 Selenicereus undatus HOM05D005593 ORTHO05D006515 0.0e+00 1582.4 858 100.0
EL10Ac8g18455 Beta vulgaris HOM05D005593 ORTHO05D006515 1.7e-136 491.1 906 41.4
AUR62010967 Chenopodium quinoa HOM05D005593 ORTHO05D006515 5.0e-136 489.6 899 40.0
AUR62021477 Chenopodium quinoa HOM05D005593 ORTHO05D006515 1.3e-128 464.9 900 39.3
Hund09560 Selenicereus undatus HOM05D005593 ORTHO05D006515 9.5e-111 405.6 916 35.8
Ah.14g082180 Amaranthus hybridus HOM05D005593 ORTHO05D006515 2.6e-108 397.5 914 37.4
Ah.09g231030 Amaranthus hybridus HOM05D005593 ORTHO05D006515 3.5e-97 360.5 872 34.2
Sc08g0007580 Simmondsia chinensis HOM05D005593 ORTHO05D006515 7.3e-95 352.8 905 34.0
TAR383G0262 Trochodendron aralioides HOM05D005593 ORTHO05D006515 5.3e-69 266.9 973 28.4
Cfa003241 Carpinus fangiana HOM05D005593 ORTHO05D006515 9.9e-68 262.7 939 30.7
Dinv36648 Davidia involucrata HOM05D005593 ORTHO05D006515 4.2e-66 257.3 937 28.9
Dinv41619 Davidia involucrata HOM05D005593 ORTHO05D006515 6.2e-62 243.4 940 28.9
Haze_25764 Corylus avellana HOM05D005593 ORTHO05D006515 2.4e-61 241.5 937 28.4
CiPaw.04G162900 Carya illinoinensis HOM05D005593 ORTHO05D006515 3.1e-61 241.1 926 26.7
FAN23G2457 Fragaria x ananassa HOM05D005593 ORTHO05D006515 1.1e-58 232.6 921 27.8
RcHm_v2.0_Chr2g0090061 Rosa chinensis HOM05D005593 ORTHO05D006515 1.1e-58 232.6 919 28.4
Prupe.7G233100 Prunus persica HOM05D005593 ORTHO05D006515 7.1e-58 229.9 929 28.0
FAN26G1119 Fragaria x ananassa HOM05D005593 ORTHO05D006515 3.5e-57 227.6 916 27.1
FAN19G1075 Fragaria x ananassa HOM05D005593 ORTHO05D006515 1.0e-56 226.1 921 27.4
Thecc.09G108000 Theobroma cacao HOM05D005593 ORTHO05D006515 6.7e-56 223.4 943 27.3
GSVIVG01015371001 Vitis vinifera HOM05D005593 ORTHO05D006515 1.8e-53 215.3 752 26.6
Duzib187G0236 Durio zibethinus HOM05D005593 ORTHO05D006515 2.4e-53 214.9 933 26.2
FAN28G0021 Fragaria x ananassa HOM05D005593 ORTHO05D006515 1.5e-52 212.2 901 26.0
QL02p044157 Quercus lobata HOM05D005593 ORTHO05D006515 4.5e-52 210.7 903 27.0
Cpa.g.sc23.90 Carica papaya HOM05D005593 ORTHO05D006515 4.2e-50 204.1 925 26.7
Duzib150G1551 Durio zibethinus HOM05D005593 ORTHO05D006515 1.1e-47 196.1 925 26.7
TWI63G0748 Tripterygium wilfordii HOM05D005593 ORTHO05D006515 1.9e-47 195.3 950 25.7
MD15G1182400 Malus domestica HOM05D005593 ORTHO05D006515 2.5e-47 194.9 880 27.0
Peaxi162Scf00231g00216 Petunia axillaris HOM05D005593 ORTHO05D006515 1.3e-46 192.6 966 24.6
QL02p043456 Quercus lobata HOM05D005593 ORTHO05D006515 1.5e-44 185.7 885 26.7
Oeu064588.2 Olea europaea HOM05D005593 ORTHO05D006515 2.6e-44 184.9 946 25.8
Nn3g18070 Nelumbo nucifera HOM05D005593 ORTHO05D006515 3.4e-44 184.5 958 25.3
Ciclev10007444m.g Citrus clementina HOM05D005593 ORTHO05D006515 4.5e-44 184.1 919 25.0
Gohir.D07G006300 Gossypium hirsutum HOM05D005593 ORTHO05D006515 1.0e-43 183.0 890 25.5
Gorai.010G072700 Gossypium raimondii HOM05D005593 ORTHO05D006515 1.0e-43 183.0 942 25.1
Gorai.001G005900 Gossypium raimondii HOM05D005593 ORTHO05D006515 2.9e-43 181.4 890 25.5
CiPaw.03G229900 Carya illinoinensis HOM05D005593 ORTHO05D006515 5.0e-43 180.6 911 25.9
Nn2g11698 Nelumbo nucifera HOM05D005593 ORTHO05D006515 6.5e-43 180.3 988 25.0
Medtr6g087760 Medicago truncatula HOM05D005593 ORTHO05D006515 1.4e-42 179.1 920 25.1
Peaxi162Scf01363g00023 Petunia axillaris HOM05D005593 ORTHO05D006515 2.5e-42 178.3 937 25.9
Gohir.D06G062400 Gossypium hirsutum HOM05D005593 ORTHO05D006515 4.2e-42 177.6 944 24.9
Manes.16G114300 Manihot esculenta HOM05D005593 ORTHO05D006515 4.2e-42 177.6 940 26.0
Psat1g043640 Pisum sativum HOM05D005593 ORTHO05D006515 7.2e-42 176.8 918 25.4
CSS0003686 Camellia sinensis var. sinensis HOM05D005593 ORTHO05D006515 1.2e-41 176.0 1053 24.2
arahy.Tifrunner.gnm1.ann1.F0KYD5 Arachis hypogaea HOM05D005593 ORTHO05D006515 4.6e-41 174.1 930 24.8
CANSAT56G2752 Cannabis sativa HOM05D005593 ORTHO05D006515 6.1e-41 173.7 958 26.2
Glyma.07G084900 Glycine max HOM05D005593 ORTHO05D006515 1.8e-40 172.2 925 25.4
Phvul.004G165100 Phaseolus vulgaris HOM05D005593 ORTHO05D006515 3.0e-40 171.4 911 26.5
Gohir.A06G063700 Gossypium hirsutum HOM05D005593 ORTHO05D006515 3.9e-40 171.0 944 24.6
Aqoxy7G01612 Aquilegia oxysepala HOM05D005593 ORTHO05D006515 2.0e-39 168.7 950 26.0
PSO832G1383 Papaver somniferum HOM05D005593 ORTHO05D006515 2.5e-39 168.3 1015 23.6
Ca_25537_v3 Cicer arietinum L. HOM05D005593 ORTHO05D006515 3.3e-39 167.9 903 25.5
Nitab4.5_0000097g0120 Nicotiana tabacum HOM05D005593 ORTHO05D006515 9.7e-39 166.4 989 27.3
Glyma.09G192000 Glycine max HOM05D005593 ORTHO05D006515 1.3e-38 166.0 924 25.2
VMungo0464G1894 Vigna mungo HOM05D005593 ORTHO05D006515 4.8e-38 164.1 919 26.0
Rhsim01G0100000 Rhododendron simsii HOM05D005593 ORTHO05D006515 1.4e-37 162.5 718 26.9
Peaxi162Scf00207g01317 Petunia axillaris HOM05D005593 ORTHO05D006515 1.8e-37 162.2 903 25.5
TPR.G10037 Trifolium pratense HOM05D005593 ORTHO05D006515 1.8e-37 162.2 907 24.5
Lj2g0010013 Lotus japonicus HOM05D005593 ORTHO05D006515 2.4e-37 161.8 913 25.5
MSTRG.19579 Avicennia marina HOM05D005593 ORTHO05D006515 6.9e-37 160.2 914 26.0
PGR142G3553 Punica granatum HOM05D005593 ORTHO05D006515 1.2e-36 159.5 902 25.7
Nitab4.5_0013892g0010 Nicotiana tabacum HOM05D005593 ORTHO05D006515 2.6e-36 158.3 990 27.1
Cc06_g09850 Coffea canephora HOM05D005593 ORTHO05D006515 1.7e-35 155.6 968 24.8
Manes.03G022200 Manihot esculenta HOM05D005593 ORTHO05D006515 2.9e-35 154.8 928 25.1
Potri.018G082300 Populus trichocarpa HOM05D005593 ORTHO05D006515 1.9e-34 152.1 936 25.4
Actinidia20382 Actinidia chinensis HOM05D005593 ORTHO05D006515 2.5e-34 151.8 771 25.2
Lalb_Chr22g0352731 Lupinus albus HOM05D005593 ORTHO05D006515 2.5e-34 151.8 920 24.6
PSO782G3244 Papaver somniferum HOM05D005593 ORTHO05D006515 4.7e-33 147.5 1007 24.2
Sabra18G0070100 Salix brachista HOM05D005593 ORTHO05D006515 1.0e-32 146.4 927 25.0
Nitab4.5_0009314g0010 Nicotiana tabacum HOM05D005593 ORTHO05D006515 3.0e-32 144.8 941 24.4
TWI34G0806 Tripterygium wilfordii HOM05D005593 ORTHO05D006515 3.0e-32 144.8 534 29.0
vmacro20713 Vaccinium macrocarpon HOM05D005593 ORTHO05D006515 3.0e-32 144.8 727 25.3
Lalb_Chr14g0371581 Lupinus albus HOM05D005593 ORTHO05D006515 3.9e-32 144.4 922 23.9
Sed0013092 Sechium edule HOM05D005593 ORTHO05D006515 5.7e-31 140.6 871 24.9
SalBow6G5362 Salvia bowleyana HOM05D005593 ORTHO05D006515 7.4e-31 140.2 884 23.6
Solyc07g032710.4 Solanum lycopersicum HOM05D005593 ORTHO05D006515 4.8e-30 137.5 930 24.8
PGSC0003DMG400000308 Solanum tuberosum HOM05D005593 ORTHO05D006515 5.3e-29 134.0 921 23.5
DCAR_012067 Daucus carota HOM05D005593 ORTHO05D006515 1.2e-28 132.9 961 24.5
Sopen07g016890 Solanum pennellii HOM05D005593 ORTHO05D006515 3.5e-28 131.3 929 25.1
Sopen12g003130 Solanum pennellii HOM05D005593 ORTHO05D006515 5.0e-27 127.5 903 22.8
Nitab4.5_0002904g0040 Nicotiana tabacum HOM05D005593 ORTHO05D006515 3.2e-26 124.8 910 24.3
PGSC0003DMG400015636 Solanum tuberosum HOM05D005593 ORTHO05D006515 4.2e-26 124.4 949 25.3
CSS0038657 Camellia sinensis var. sinensis HOM05D005593 ORTHO05D006515 5.5e-26 124.0 903 23.8
Solyc12g007140.3 Solanum lycopersicum HOM05D005593 ORTHO05D006515 1.2e-25 122.9 688 24.6
ECA234G4430 Erigeron canadensis HOM05D005593 ORTHO05D006515 6.1e-25 120.6 913 22.0
COL.COLO4_34842 Corchorus olitorius HOM05D005593 ORTHO05D006515 1.8e-24 119.0 635 24.7
ClCG06G008720 Citrullus lanatus HOM05D005593 ORTHO05D006515 9.7e-23 113.2 906 24.6
Dinv11466 Davidia involucrata HOM05D005593 ORTHO05D006515 4.1e-21 107.8 321 32.4
HanXRQChr12g0355541 Helianthus annuus HOM05D000246 ORTHO05D008363 7.0e-21 107.1 476 27.9
MELO3C024628.2 Cucumis melo HOM05D005593 ORTHO05D006515 3.5e-20 104.8 907 22.6
Phvul.002G312500 Phaseolus vulgaris HOM05D005593 ORTHO05D006515 4.5e-20 104.4 922 23.0
Rhsim01G0099500 Rhododendron simsii HOM05D005593 ORTHO05D006515 4.5e-20 104.4 205 31.7
Gohir.A07G005700 Gossypium hirsutum HOM05D005593 ORTHO05D006515 7.7e-20 103.6 635 22.5
Eucgr.C01030 Eucalyptus grandis HOM05D005593 ORTHO05D006515 2.2e-19 102.1 186 34.9
Lsat_1_v5_gn_5_103481 Lactuca sativa HOM05D005593 ORTHO05D006515 8.5e-19 100.1 496 26.6
MBI04_g19171_MAGBIO Magnolia biondii HOM05D005593 ORTHO05D006515 1.1e-18 99.8 743 23.4
THA.LOC104804597 Tarenaya hassleriana HOM05D005593 ORTHO05D006515 1.1e-18 99.8 930 23.8
TWI34G0072 Tripterygium wilfordii HOM05D005593 ORTHO05D006515 1.1e-18 99.8 163 35.6
DCAR_028703 Daucus carota HOM05D005593 ORTHO05D006515 1.5e-18 99.4 200 31.5
A07p07590 Brassica napus HOM05D005593 ORTHO05D006515 2.5e-18 98.6 900 24.2
BraA07t28551Z Brassica rapa HOM05D005593 ORTHO05D006515 4.2e-18 97.8 900 24.2
Rhsim01G0099800 Rhododendron simsii HOM05D005593 ORTHO05D006515 1.0e-16 93.2 373 27.9
Carub.0003s2504 Capsella rubella HOM05D005593 ORTHO05D006515 5.2e-16 90.9 912 21.9
Glyma.05G230300 Glycine max HOM05D005593 ORTHO05D006515 6.7e-16 90.5 896 22.5
VMungo0251G1265 Vigna mungo HOM05D005593 ORTHO05D006515 6.7e-16 90.5 927 22.4
Glyma.08G037800 Glycine max HOM05D005593 ORTHO05D006515 2.0e-15 89.0 901 21.5
arahy.Tifrunner.gnm1.ann1.31F9U3 Arachis hypogaea HOM05D005593 ORTHO05D006515 3.3e-15 88.2 398 27.4
ClCG11G002410 Citrullus lanatus HOM05D005593 ORTHO05D006515 5.7e-15 87.4 384 27.9
BcaB06g26676 Brassica carinata HOM05D005593 ORTHO05D006515 9.7e-15 86.7 893 21.9
CsaV3_1G024390 Cucumis sativus L. HOM05D005593 ORTHO05D006515 1.3e-14 86.3 405 25.2
BcaC06g35744 Brassica carinata HOM05D005593 ORTHO05D006515 1.7e-14 85.9 910 23.1
C07p11350 Brassica napus HOM05D005593 ORTHO05D006515 1.7e-14 85.9 908 22.5
BolC7t41613H Brassica oleracea HOM05D005593 ORTHO05D006515 2.2e-14 85.5 908 23.1
Aa31sc586G30 Aethionema arabicum HOM05D005593 ORTHO05D006515 1.8e-13 82.4 871 20.3
AL3G40252 Arabidopsis lyrata HOM05D005593 ORTHO05D006515 7.0e-13 80.5 901 21.2
AT3G24630 Arabidopsis thaliana HOM05D005593 ORTHO05D006515 7.0e-13 80.5 897 22.0
CSS0008305 Camellia sinensis var. sinensis HOM05D005593 ORTHO05D006515 1.2e-12 79.7 203 29.6
CARHR100960 Cardamine hirsuta HOM05D005593 ORTHO05D006515 1.2e-12 79.7 890 21.1
CsaV3_2G002210 Cucumis sativus L. HOM05D005593 ORTHO05D006515 5.9e-12 77.4 383 26.6
Lj7E653T1 Lonicera japonica HOM05D005593 ORTHO05D006515 1.3e-11 76.3 136 40.4
ATR0315G161 Amborella trichopoda HOM05D005593 ORTHO05D006515 3.8e-11 74.7 204 28.9
MELO3C004562.2 Cucumis melo HOM05D005593 ORTHO05D006515 8.5e-11 73.6 385 25.5
Sp3g22410 Schrenkiella parvula HOM05D005593 ORTHO05D006515 3.2e-10 71.6 915 20.8
Rhsim01G0098000 Rhododendron simsii HOM05D005593 ORTHO05D006515 2.1e-09 68.9 134 39.6
COL.COLO4_26325 Corchorus olitorius HOM05D006788 ORTHO05D008265 2.7e-09 68.6 167 31.1
BolC7t41614H Brassica oleracea HOM05D005593 ORTHO05D006515 3.6e-09 68.2 317 27.8
ATR0733G187 Amborella trichopoda HOM05D006788 ORTHO05D008265 2.3e-08 65.5 366 25.1
HPP92_010043 Vanilla planifolia HOM05D005593 ORTHO05D006515 3.0e-08 65.1 168 26.8
Thhalv10002425m.g Eutrema salsugineum HOM05D005593 ORTHO05D006515 4.0e-08 64.7 900 19.3
Peaxi162Scf00417g01019 Petunia axillaris HOM05D006788 ORTHO05D008265 4.0e-08 64.7 236 27.1
Nitab4.5_0009150g0020 Nicotiana tabacum HOM05D006788 ORTHO05D008265 5.2e-08 64.3 178 29.2
MSTRG.24293 Avicennia marina HOM05D006788 ORTHO05D008265 3.7e-06 58.2 172 28.5
LjContig00484g0028229 Lotus japonicus HOM05D006788 ORTHO05D008265 4.8e-06 57.8 165 28.5
PSO700G0053 Papaver somniferum HOM05D006788 ORTHO05D008265 4.8e-06 57.8 171 29.8


User provided reference genes

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