Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09034 Selenicereus undatus HOM05D004757 ORTHO05D005743 4.0e-96 354.8 181 100.0
EL10Ac8g18296 Beta vulgaris HOM05D004757 ORTHO05D005743 1.8e-40 169.9 131 67.9
Ah.14g083740 Amaranthus hybridus HOM05D004757 ORTHO05D005743 1.9e-37 159.8 131 62.6
Sc08g0005260 Simmondsia chinensis HOM05D004757 ORTHO05D005743 6.4e-33 144.8 146 56.2
ClCG06G013460 Citrullus lanatus HOM05D004757 ORTHO05D005743 1.9e-32 143.3 133 56.4
Sc14g0001290 Simmondsia chinensis HOM05D004757 ORTHO05D005743 1.6e-31 140.2 125 56.8
CsaV3_1G031720 Cucumis sativus L. HOM05D004757 ORTHO05D005743 2.7e-31 139.4 133 55.6
Ah.09g229970 Amaranthus hybridus HOM05D004757 ORTHO05D005743 8.6e-30 134.4 154 48.7
Cfa013398 Carpinus fangiana HOM05D004757 ORTHO05D005743 8.6e-30 134.4 130 55.4
Potri.006G166400 Populus trichocarpa HOM05D004757 ORTHO05D005743 4.3e-29 132.1 143 51.0
MELO3C017451.2 Cucumis melo HOM05D004757 ORTHO05D005743 5.6e-29 131.7 122 55.7
Manes.06G022800 Manihot esculenta HOM05D004757 ORTHO05D005743 5.6e-29 131.7 135 56.3
Atru.chr7.878 Acer truncatum HOM05D004757 ORTHO05D005743 7.3e-29 131.3 134 55.2
CiPaw.07G193700 Carya illinoinensis HOM05D004757 ORTHO05D005743 7.3e-29 131.3 139 55.4
ECA234G2687 Erigeron canadensis HOM05D004757 ORTHO05D005743 1.6e-28 130.2 132 52.3
Actinidia01305 Actinidia chinensis HOM05D004757 ORTHO05D005743 2.1e-28 129.8 129 52.7
Aa31LG8G16000 Aethionema arabicum HOM05D004757 ORTHO05D005743 4.7e-28 128.6 121 54.5
Manes.14G157383 Manihot esculenta HOM05D004757 ORTHO05D005743 8.0e-28 127.9 135 54.1
TWI34G1741 Tripterygium wilfordii HOM05D004757 ORTHO05D005743 8.0e-28 127.9 140 53.6
Glyma.13G097500 Glycine max HOM05D004757 ORTHO05D005743 1.8e-27 126.7 128 54.7
Lj4g0011233 Lotus japonicus HOM05D004757 ORTHO05D005743 2.3e-27 126.3 135 53.3
Actinidia19844 Actinidia chinensis HOM05D004757 ORTHO05D005743 5.2e-27 125.2 122 52.5
ECA240G0762 Erigeron canadensis HOM05D004757 ORTHO05D005743 5.2e-27 125.2 128 50.0
Sed0015670 Sechium edule HOM05D004757 ORTHO05D005743 5.2e-27 125.2 133 52.6
BcaB07g31638 Brassica carinata HOM05D004757 ORTHO05D005743 8.9e-27 124.4 163 45.4
Haze_21940 Corylus avellana HOM05D004757 ORTHO05D005743 8.9e-27 124.4 113 56.6
Phvul.003G144000 Phaseolus vulgaris HOM05D004757 ORTHO05D005743 1.2e-26 124.0 128 53.9
unitig_21.g20652 Utricularia gibba HOM05D004757 ORTHO05D005743 1.2e-26 124.0 129 52.7
A07p01750 Brassica napus HOM05D004757 ORTHO05D005743 1.5e-26 123.6 132 50.8
CDE04G2108 Ceratophyllum demersum HOM05D004757 ORTHO05D005743 2.0e-26 123.2 135 50.4
TWI63G0987 Tripterygium wilfordii HOM05D004757 ORTHO05D005743 2.0e-26 123.2 140 52.1
Glyma.17G062100 Glycine max HOM05D004757 ORTHO05D005743 3.4e-26 122.5 128 54.7
TAR626G1857 Trochodendron aralioides HOM05D004757 ORTHO05D005743 3.4e-26 122.5 140 52.9
Carub.0003s3315 Capsella rubella HOM05D004757 ORTHO05D005743 4.4e-26 122.1 132 50.8
Lsat_1_v5_gn_7_54961 Lactuca sativa HOM05D004757 ORTHO05D005743 4.4e-26 122.1 132 52.3
A09p12120 Brassica napus HOM05D004757 ORTHO05D005743 7.5e-26 121.3 124 52.4
BraA07t27976Z Brassica rapa HOM05D004893 ORTHO05D006320 9.8e-26 120.9 114 53.5
AT2G18910 Arabidopsis thaliana HOM05D004757 ORTHO05D005743 1.7e-25 120.2 132 50.8
AL3G53010 Arabidopsis lyrata HOM05D004757 ORTHO05D005743 2.2e-25 119.8 132 50.0
C07p03670 Brassica napus HOM05D004757 ORTHO05D005743 2.2e-25 119.8 132 50.0
BolC7t40764H Brassica oleracea HOM05D004757 ORTHO05D005743 2.2e-25 119.8 132 50.0
Lalb_Chr13g0300141 Lupinus albus HOM05D004757 ORTHO05D005743 2.2e-25 119.8 137 49.6
Medtr4g127810 Medicago truncatula HOM05D004757 ORTHO05D005743 2.2e-25 119.8 140 49.3
Potri.018G090900 Populus trichocarpa HOM05D004757 ORTHO05D005743 2.2e-25 119.8 136 47.8
Sed0003925 Sechium edule HOM05D004757 ORTHO05D005743 2.2e-25 119.8 135 50.4
BcaC04g22879 Brassica carinata HOM05D004757 ORTHO05D005743 2.9e-25 119.4 116 53.4
Lsat_1_v5_gn_5_85101 Lactuca sativa HOM05D004757 ORTHO05D005743 2.9e-25 119.4 132 48.5
Solyc07g006960.3 Solanum lycopersicum HOM05D004757 ORTHO05D005743 2.9e-25 119.4 125 52.0
Prupe.1G082700 Prunus persica HOM05D004757 ORTHO05D005743 4.9e-25 118.6 128 50.0
THA.LOC104803488 Tarenaya hassleriana HOM05D004757 ORTHO05D005743 4.9e-25 118.6 131 50.4
THA.LOC104803943 Tarenaya hassleriana HOM05D004757 ORTHO05D005743 4.9e-25 118.6 132 50.0
Duzib150G0244 Durio zibethinus HOM05D004757 ORTHO05D005743 6.4e-25 118.2 140 51.4
ECA236G5014 Erigeron canadensis HOM05D004757 ORTHO05D005743 6.4e-25 118.2 116 51.7
Cpa.g.sc95.44 Carica papaya HOM05D004757 ORTHO05D005743 8.3e-25 117.9 138 50.0
Duzib168G0914 Durio zibethinus HOM05D004757 ORTHO05D005743 1.9e-24 116.7 135 51.9
MSTRG.19719 Avicennia marina HOM05D004757 ORTHO05D005743 2.4e-24 116.3 124 53.2
Peaxi162Scf01558g00012 Petunia axillaris HOM05D004757 ORTHO05D005743 4.1e-24 115.5 143 49.7
BolC3t18202H Brassica oleracea HOM05D004757 ORTHO05D005743 5.4e-24 115.2 133 48.9
Sopen07g003050 Solanum pennellii HOM05D004757 ORTHO05D005743 5.4e-24 115.2 122 50.8
BolC9t54334H Brassica oleracea HOM05D004757 ORTHO05D005743 7.0e-24 114.8 142 47.9
Gohir.A08G083700 Gossypium hirsutum HOM05D004757 ORTHO05D005743 7.0e-24 114.8 139 50.4
Migut.K00229 Erythranthe guttata HOM05D004757 ORTHO05D005743 9.2e-24 114.4 118 51.7
C03p59380 Brassica napus HOM05D004757 ORTHO05D005743 1.2e-23 114.0 133 48.1
CDE02G3269 Ceratophyllum demersum HOM05D004757 ORTHO05D005743 1.2e-23 114.0 136 47.8
CAN.G1464.4 Capsicum annuum HOM05D004757 ORTHO05D005743 1.6e-23 113.6 126 49.2
HanXRQChr09g0254201 Helianthus annuus HOM05D004757 ORTHO05D005743 1.6e-23 113.6 114 57.0
BraA09t36856Z Brassica rapa HOM05D004757 ORTHO05D005743 2.1e-23 113.2 133 50.4
Thecc.09G175100 Theobroma cacao HOM05D004757 ORTHO05D005743 2.1e-23 113.2 139 48.9
Dinv19553 Davidia involucrata HOM05D004757 ORTHO05D005743 2.7e-23 112.8 121 54.5
Nitab4.5_0010128g0010 Nicotiana tabacum HOM05D004757 ORTHO05D005743 2.7e-23 112.8 145 46.2
Oeu025209.1 Olea europaea HOM05D004757 ORTHO05D005743 2.7e-23 112.8 119 54.6
PGSC0003DMG400018757 Solanum tuberosum HOM05D004757 ORTHO05D005743 2.7e-23 112.8 123 52.8
VMungo1215G0044 Vigna mungo HOM05D004757 ORTHO05D005743 2.7e-23 112.8 111 55.9
MD16G1255800 Malus domestica HOM05D004757 ORTHO05D005743 3.5e-23 112.5 141 46.8
Duzib170G0153 Durio zibethinus HOM05D004757 ORTHO05D005743 4.6e-23 112.1 138 50.0
Gohir.D08G093400 Gossypium hirsutum HOM05D004757 ORTHO05D005743 4.6e-23 112.1 139 49.6
BcaC06g36489 Brassica carinata HOM05D004757 ORTHO05D005743 7.8e-23 111.3 113 51.3
CARHR109470 Cardamine hirsuta HOM05D004757 ORTHO05D005743 7.8e-23 111.3 132 47.7
C09p14310 Brassica napus HOM05D004757 ORTHO05D005743 1.3e-22 110.5 141 46.1
Oeu025694.3 Olea europaea HOM05D004757 ORTHO05D005743 1.3e-22 110.5 118 54.2
TPR.G5446 Trifolium pratense HOM05D004757 ORTHO05D005743 1.3e-22 110.5 142 46.5
BcaB03g16684 Brassica carinata HOM05D004757 ORTHO05D005743 2.3e-22 109.8 132 47.7
Psat4g012760 Pisum sativum HOM05D004757 ORTHO05D005743 2.3e-22 109.8 142 45.8
HanXRQChr05g0142021 Helianthus annuus HOM05D004757 ORTHO05D005743 3.0e-22 109.4 118 49.2
PSO170G5353 Papaver somniferum HOM05D004757 ORTHO05D005743 3.9e-22 109.0 174 42.0
PSO063G6152 Papaver somniferum HOM05D004757 ORTHO05D005743 5.1e-22 108.6 174 42.0
SGA_v2.0_scaffold66G22433 Striga asiatica HOM05D004757 ORTHO05D005743 5.1e-22 108.6 116 54.3
Ca_21237_v3 Cicer arietinum L. HOM05D004757 ORTHO05D005743 6.6e-22 108.2 110 54.5
Lalb_Chr12g0199461 Lupinus albus HOM05D004757 ORTHO05D005743 8.6e-22 107.8 129 45.7
QL02p098330 Quercus lobata HOM05D004757 ORTHO05D005743 8.6e-22 107.8 115 48.7
Migut.J01503 Erythranthe guttata HOM05D004757 ORTHO05D005743 1.1e-21 107.5 135 45.2
HanXRQChr09g0244371 Helianthus annuus HOM05D004757 ORTHO05D005743 1.5e-21 107.1 113 53.1
Lsat_1_v5_gn_8_68041 Lactuca sativa HOM05D004757 ORTHO05D005743 1.5e-21 107.1 113 51.3
A06p33080 Brassica napus HOM05D004757 ORTHO05D005743 1.9e-21 106.7 126 46.0
CiPaw.08G035200 Carya illinoinensis HOM05D004757 ORTHO05D005743 3.3e-21 105.9 145 45.5
Gorai.004G099000 Gossypium raimondii HOM05D004757 ORTHO05D005743 3.3e-21 105.9 136 47.8
ATR0030G045 Amborella trichopoda HOM05D004757 ORTHO05D005743 4.3e-21 105.5 130 49.2
AUR62043442 Chenopodium quinoa HOM05D000216 ORTHO05D003518 4.3e-21 105.5 81 59.3
Nn2g12725 Nelumbo nucifera HOM05D004757 ORTHO05D005743 4.3e-21 105.5 136 46.3
DCAR_020127 Daucus carota HOM05D004757 ORTHO05D005743 5.6e-21 105.1 126 50.0
Hma1.2p1_0935F.1_g238550 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 5.6e-21 105.1 134 45.5
Hma1.2p1_2317F.1_g319740 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 5.6e-21 105.1 131 48.1
GSVIVG01035530001 Vitis vinifera HOM05D004757 ORTHO05D005743 5.6e-21 105.1 130 47.7
MBI16_g31788_MAGBIO Magnolia biondii HOM05D004757 ORTHO05D005743 7.3e-21 104.8 151 42.4
Rhsim01G0003200 Rhododendron simsii HOM05D004757 ORTHO05D005743 7.3e-21 104.8 124 52.4
SalBow6G1691 Salvia bowleyana HOM05D004757 ORTHO05D005743 7.3e-21 104.8 122 49.2
BraA06t26238Z Brassica rapa HOM05D004757 ORTHO05D005743 9.5e-21 104.4 115 47.8
Hma1.2p1_1303F.1_g274440 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 9.5e-21 104.4 141 44.7
Sp3g32380 Schrenkiella parvula HOM05D004757 ORTHO05D005743 9.5e-21 104.4 127 44.9
Gohir.D08G030000 Gossypium hirsutum HOM05D004757 ORTHO05D005743 1.2e-20 104.0 149 45.0
Gorai.004G027500 Gossypium raimondii HOM05D004757 ORTHO05D005743 1.2e-20 104.0 149 45.0
HPP92_015369 Vanilla planifolia HOM05D004757 ORTHO05D005743 1.2e-20 104.0 149 45.0
Cc06_g12990 Coffea canephora HOM05D004757 ORTHO05D005743 1.6e-20 103.6 150 46.7
MD13G1249500 Malus domestica HOM05D004757 ORTHO05D005743 1.6e-20 103.6 141 43.3
Nn8g40409 Nelumbo nucifera HOM05D004757 ORTHO05D005743 1.6e-20 103.6 157 42.7
Ciclev10009829m.g Citrus clementina HOM05D004757 ORTHO05D005743 2.8e-20 102.8 120 46.7
FAN17G1906 Fragaria x ananassa HOM05D004757 ORTHO05D005743 3.6e-20 102.4 126 47.6
Gohir.A08G019400 Gossypium hirsutum HOM05D004757 ORTHO05D005743 3.6e-20 102.4 144 44.4
TAR383G0800 Trochodendron aralioides HOM05D004757 ORTHO05D005743 3.6e-20 102.4 130 50.0
ATR0580G064 Amborella trichopoda HOM05D004757 ORTHO05D005743 4.7e-20 102.1 127 48.8
Thhalv10022848m.g Eutrema salsugineum HOM05D004757 ORTHO05D005743 6.2e-20 101.7 132 44.7
PGR044G0017 Punica granatum HOM05D004757 ORTHO05D005743 8.1e-20 101.3 120 46.7
HanXRQChr10g0308501 Helianthus annuus HOM05D004757 ORTHO05D005743 1.8e-19 100.1 124 46.8
Eucgr.L02640 Eucalyptus grandis HOM05D004757 ORTHO05D005743 2.3e-19 99.8 124 48.4
Aqoxy7G02958 Aquilegia oxysepala HOM05D004757 ORTHO05D005743 4.0e-19 99.0 132 46.2
FvH4_4g07900 Fragaria vesca HOM05D004757 ORTHO05D005743 1.2e-18 97.4 137 44.5
TAR636G1688 Trochodendron aralioides HOM05D004757 ORTHO05D005743 1.5e-18 97.1 124 49.2
RcHm_v2.0_Chr4g0401201 Rosa chinensis HOM05D004757 ORTHO05D005743 2.0e-18 96.7 131 45.0
CSS0012735 Camellia sinensis var. sinensis HOM05D004757 ORTHO05D005743 1.7e-17 93.6 133 47.4
CANSAT11G1025 Cannabis sativa HOM05D004757 ORTHO05D005743 1.7e-17 93.6 142 40.1
Eucgr.C00145 Eucalyptus grandis HOM05D004757 ORTHO05D005743 2.2e-17 93.2 116 48.3
CSS0015413 Camellia sinensis var. sinensis HOM05D004757 ORTHO05D005743 1.9e-16 90.1 125 44.0
PGR142G2781 Punica granatum HOM05D004757 ORTHO05D005743 1.9e-16 90.1 139 43.9
Sabra06G0128000 Salix brachista HOM05D004757 ORTHO05D005743 4.1e-16 89.0 157 37.6
MSTRG.6239 Avicennia marina HOM05D004757 ORTHO05D005743 4.6e-15 85.5 124 42.7
FAN07G0988 Fragaria x ananassa HOM05D004757 ORTHO05D005743 6.0e-15 85.1 163 38.0
FAN22G2108 Fragaria x ananassa HOM05D004757 ORTHO05D005743 6.0e-15 85.1 163 38.0
FAN12G2780 Fragaria x ananassa HOM05D004757 ORTHO05D005743 1.0e-14 84.3 160 38.1
Zm00001eb236700 Zea mays HOM05D004757 ORTHO05D005743 1.7e-14 83.6 172 34.9
vmacro13132 Vaccinium macrocarpon HOM05D004757 ORTHO05D005743 2.3e-14 83.2 142 39.4
Os02g0461900 Oryza sativa ssp. japonica HOM05D004757 ORTHO05D005743 5.1e-14 82.0 183 35.5
Peaxi162Scf00200g00183 Petunia axillaris HOM05D004757 ORTHO05D005743 8.6e-14 81.3 94 47.9
AUR62021312 Chenopodium quinoa HOM05D004757 ORTHO05D005743 1.5e-13 80.5 89 52.8
Sabra18G0078100 Salix brachista HOM05D004757 ORTHO05D005743 1.5e-13 80.5 153 35.9
Peaxi162Scf00200g01819 Petunia axillaris HOM05D004757 ORTHO05D005743 4.3e-13 79.0 89 49.4
Zm00001eb180540 Zea mays HOM05D004757 ORTHO05D005743 7.3e-13 78.2 150 38.0
AUR62033229 Chenopodium quinoa HOM05D004757 ORTHO05D005743 8.1e-12 74.7 89 50.6
Zm00001eb420280 Zea mays HOM05D004757 ORTHO05D005743 2.6e-10 69.7 147 35.4
Zm00001eb087060 Zea mays HOM05D004757 ORTHO05D005743 1.6e-07 60.5 66 45.5
Dinv41223 Davidia involucrata HOM05D004757 ORTHO05D005743 3.5e-07 59.3 99 43.4
Peaxi162Scf00627g00011 Petunia axillaris HOM05D004757 ORTHO05D005743 3.5e-07 59.3 91 42.9
Peaxi162Scf00200g00182 Petunia axillaris HOM05D004757 ORTHO05D005743 6.0e-07 58.5 106 40.6


User provided reference genes

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