Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 1.5e-78 296.2 158 100.0
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 8.8e-47 190.7 151 69.5
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 3.4e-46 188.7 155 68.4
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 4.4e-46 188.3 162 68.5
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 1.6e-32 143.3 156 56.4
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 3.6e-32 142.1 147 59.2
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.0e-31 140.6 151 56.3
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 4.0e-31 138.7 103 72.8
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 6.8e-31 137.9 156 59.6
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 8.9e-31 137.5 154 57.1
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 8.9e-31 137.5 156 54.5
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 8.9e-31 137.5 156 56.4
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 2.0e-30 136.3 156 57.7
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 2.0e-30 136.3 159 57.2
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 3.4e-30 135.6 152 59.2
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 3.4e-30 135.6 113 68.1
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 7.5e-30 134.4 156 55.1
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 7.5e-30 134.4 157 54.8
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 7.5e-30 134.4 156 55.1
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 9.8e-30 134.0 157 54.1
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 9.8e-30 134.0 127 65.4
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 9.8e-30 134.0 103 70.9
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 1.3e-29 133.7 112 71.4
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 1.3e-29 133.7 113 69.0
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 1.7e-29 133.3 157 57.3
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 1.7e-29 133.3 156 56.4
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 2.2e-29 132.9 106 72.6
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 2.9e-29 132.5 101 74.3
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 3.7e-29 132.1 155 56.1
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 4.9e-29 131.7 133 64.7
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 4.9e-29 131.7 155 56.1
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 6.4e-29 131.3 157 57.3
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 6.4e-29 131.3 157 57.3
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 6.4e-29 131.3 161 54.0
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 6.4e-29 131.3 156 53.8
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 6.4e-29 131.3 159 56.6
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 8.3e-29 131.0 103 73.8
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 8.3e-29 131.0 150 54.7
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 1.1e-28 130.6 157 58.6
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 1.4e-28 130.2 101 73.3
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 1.4e-28 130.2 101 73.3
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 1.4e-28 130.2 144 59.7
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 1.8e-28 129.8 156 53.8
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 1.8e-28 129.8 157 55.4
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 1.8e-28 129.8 156 55.8
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 2.4e-28 129.4 158 57.0
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 3.2e-28 129.0 224 42.9
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 3.2e-28 129.0 99 70.7
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 3.2e-28 129.0 115 63.5
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 4.1e-28 128.6 156 53.8
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 4.1e-28 128.6 79 86.1
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 5.4e-28 128.3 157 56.7
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 5.4e-28 128.3 159 57.9
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 5.4e-28 128.3 157 56.7
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 9.2e-28 127.5 152 55.3
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 9.2e-28 127.5 89 77.5
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 9.2e-28 127.5 79 86.1
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 9.2e-28 127.5 79 86.1
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 9.2e-28 127.5 159 54.7
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 9.2e-28 127.5 82 81.7
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 1.2e-27 127.1 162 53.1
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 1.2e-27 127.1 126 61.9
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.6e-27 126.7 156 52.6
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 2.7e-27 125.9 153 57.5
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 2.7e-27 125.9 157 53.5
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 5.9e-27 124.8 157 54.8
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 5.9e-27 124.8 81 81.5
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 7.8e-27 124.4 161 54.0
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 7.8e-27 124.4 121 64.5
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.0e-26 124.0 160 49.4
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.0e-26 124.0 83 79.5
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.0e-26 124.0 83 79.5
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 1.3e-26 123.6 80 78.8
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 1.3e-26 123.6 160 51.9
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 1.7e-26 123.2 82 79.3
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 1.7e-26 123.2 82 79.3
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.9e-26 122.1 80 78.8
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 3.9e-26 122.1 154 53.2
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 3.9e-26 122.1 87 74.7
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 5.0e-26 121.7 158 55.1
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 5.0e-26 121.7 125 60.8
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 5.0e-26 121.7 79 81.0
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 6.6e-26 121.3 157 54.1
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 6.6e-26 121.3 157 54.1
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 6.6e-26 121.3 80 76.2
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 6.6e-26 121.3 159 50.9
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 1.1e-25 120.6 157 53.5
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 1.1e-25 120.6 151 50.3
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 1.5e-25 120.2 152 53.9
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.5e-25 120.2 157 53.5
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 1.9e-25 119.8 127 59.8
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 2.5e-25 119.4 152 53.9
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 9.5e-25 117.5 84 78.6
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.6e-24 116.7 155 49.0
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 1.6e-24 116.7 159 52.2
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 1.6e-24 116.7 100 64.0
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 2.1e-24 116.3 155 49.0
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 2.8e-24 115.9 156 50.0
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 3.6e-24 115.5 153 52.9
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 6.2e-24 114.8 140 53.6
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 1.4e-23 113.6 155 47.7
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 1.8e-23 113.2 155 47.1
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 3.1e-23 112.5 81 76.5
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 6.8e-23 111.3 70 82.9
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 2.0e-22 109.8 70 81.4
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 2.6e-22 109.4 164 47.0
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 4.9e-21 105.1 117 53.8
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 7.8e-19 97.8 136 50.0
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 3.9e-18 95.5 90 57.8
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 1.9e-17 93.2 103 58.3
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 5.6e-17 91.7 151 44.4
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 5.6e-17 91.7 73 68.5
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 7.3e-17 91.3 147 43.5
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 1.2e-16 90.5 58 84.5
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 3.6e-16 89.0 68 64.7
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 3.1e-15 85.9 136 47.8
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 1.5e-14 83.6 131 48.9
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 7.1e-12 74.7 47 85.1
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.6e-11 73.6 62 62.9
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 2.7e-11 72.8 92 48.9
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 7.3e-09 64.7 114 42.1
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 8.1e-08 61.2 48 70.8
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 4.0e-07 58.9 61 50.8
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 3.4e-06 55.8 74 43.2
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 7.6e-06 54.7 48 72.9


User provided reference genes

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