Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 2.7e-202 708.4 341 100.0
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 1.5e-136 490.0 342 71.9
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 7.6e-120 434.5 332 67.2
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 2.2e-119 433.0 332 66.9
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 2.4e-110 402.9 347 60.8
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 2.7e-109 399.4 336 62.8
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 3.9e-108 395.6 257 75.1
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 1.3e-106 390.6 292 67.5
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.6e-106 390.2 256 74.2
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 6.2e-106 388.3 257 73.5
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 6.2e-106 388.3 322 64.0
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 6.2e-106 388.3 208 85.6
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 6.2e-106 388.3 205 86.8
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 8.1e-106 387.9 208 85.1
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 1.4e-105 387.1 361 57.1
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 2.4e-105 386.3 255 72.9
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 3.1e-105 386.0 257 72.4
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 5.3e-105 385.2 218 82.6
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 1.2e-104 384.0 256 72.7
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 3.4e-104 382.5 308 63.3
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 4.5e-104 382.1 256 73.4
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 4.5e-104 382.1 261 71.3
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 4.5e-104 382.1 224 79.0
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 7.6e-104 381.3 336 59.8
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 1.3e-103 380.6 245 73.5
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 1.3e-103 380.6 326 62.3
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 1.7e-103 380.2 248 72.6
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 2.2e-103 379.8 337 60.5
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 3.8e-103 379.0 311 62.1
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 1.4e-102 377.1 314 60.8
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 1.9e-102 376.7 245 71.0
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 3.2e-102 375.9 261 71.6
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 4.2e-102 375.6 274 68.2
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 1.6e-101 373.6 205 82.0
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.6e-101 373.6 205 82.0
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.6e-101 373.6 205 82.0
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 1.6e-101 373.6 349 57.9
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 3.5e-101 372.5 205 82.0
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 3.5e-101 372.5 232 76.7
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 6.0e-101 371.7 219 79.5
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 7.9e-101 371.3 326 60.4
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 7.9e-101 371.3 219 79.0
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.0e-100 370.9 259 69.1
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 1.3e-100 370.5 204 83.8
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 1.8e-100 370.2 293 63.8
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 5.1e-100 368.6 299 61.5
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 6.7e-100 368.2 261 69.7
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 6.7e-100 368.2 228 75.9
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 6.7e-100 368.2 259 68.3
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 1.5e-99 367.1 337 56.7
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 1.5e-99 367.1 254 71.3
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 1.9e-99 366.7 308 61.0
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 3.3e-99 365.9 207 82.1
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 4.3e-99 365.5 338 59.5
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 7.4e-99 364.8 318 61.0
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 9.6e-99 364.4 206 81.1
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 1.3e-98 364.0 327 59.3
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 1.3e-98 364.0 246 70.3
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 1.3e-98 364.0 222 76.6
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 1.6e-98 363.6 338 58.3
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 2.1e-98 363.2 290 62.4
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 2.1e-98 363.2 310 62.3
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 2.8e-98 362.8 315 58.7
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 2.8e-98 362.8 292 62.3
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 3.7e-98 362.5 207 82.1
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 3.7e-98 362.5 231 72.3
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 3.7e-98 362.5 231 72.3
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 4.8e-98 362.1 231 72.3
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 4.8e-98 362.1 300 61.0
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 8.1e-98 361.3 312 62.5
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.1e-97 360.9 300 61.3
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 1.4e-97 360.5 285 61.8
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 2.4e-97 359.8 265 66.8
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 2.4e-97 359.8 322 59.0
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 4.0e-97 359.0 206 79.6
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 5.3e-97 358.6 320 57.8
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 6.9e-97 358.2 207 80.7
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.5e-96 357.1 234 71.8
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 1.5e-96 357.1 207 80.2
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 2.0e-96 356.7 203 78.8
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 2.0e-96 356.7 318 59.1
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 2.6e-96 356.3 311 58.5
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 2.6e-96 356.3 205 81.5
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 3.4e-96 355.9 321 58.6
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 5.8e-96 355.1 206 78.6
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 1.0e-95 354.4 205 77.1
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 1.7e-95 353.6 257 66.9
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 1.7e-95 353.6 257 66.9
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 1.7e-95 353.6 204 79.9
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 2.2e-95 353.2 207 80.7
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 2.9e-95 352.8 313 60.4
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 3.8e-95 352.4 259 66.4
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 3.8e-95 352.4 206 78.2
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 1.1e-94 350.9 285 59.3
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 1.4e-94 350.5 314 58.9
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 1.4e-94 350.5 314 58.9
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 3.2e-94 349.4 319 58.0
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 4.2e-94 349.0 203 77.8
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 5.5e-94 348.6 242 70.2
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 1.2e-93 347.4 254 66.5
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 1.2e-93 347.4 205 78.0
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 1.2e-93 347.4 192 83.3
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 1.2e-93 347.4 286 59.4
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 1.6e-93 347.1 205 79.0
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 2.7e-93 346.3 203 78.3
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 1.3e-92 344.0 205 75.6
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 2.5e-91 339.7 203 76.8
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 2.8e-90 336.3 314 57.6
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 6.3e-90 335.1 202 74.3
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.5e-88 330.5 207 71.0
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 2.6e-88 329.7 217 71.0
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 4.5e-88 328.9 210 69.5
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 1.7e-87 327.0 200 75.0
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 8.5e-87 324.7 199 75.4
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.9e-86 323.6 199 75.4
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 8.7e-84 314.7 308 55.5
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 8.2e-82 308.1 199 69.3
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.8e-76 290.4 198 64.1
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 3.3e-75 286.2 201 61.7
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 2.6e-72 276.6 229 55.0
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 1.7e-71 273.9 160 73.8
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 3.8e-71 272.7 161 74.5
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 2.5e-70 270.0 161 75.8
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 1.2e-69 267.7 267 56.2
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 2.7e-69 266.5 192 70.3
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 2.0e-67 260.4 150 77.3
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 5.7e-67 258.8 138 86.2
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 1.6e-64 250.8 144 78.5
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 1.1e-57 228.0 202 55.4
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 2.0e-56 223.8 154 68.8
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 1.0e-52 211.5 121 75.2
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 3.6e-45 186.4 156 58.3
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 9.8e-43 178.3 172 48.3
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 1.0e-31 141.7 125 52.0
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 6.6e-23 112.5 83 55.4
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 2.3e-20 104.0 167 41.3
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 4.0e-20 103.2 82 67.1
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 1.5e-19 101.3 120 50.8
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 9.2e-17 92.0 110 50.9
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 1.3e-15 88.2 59 76.3
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 6.6e-15 85.9 148 41.9
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 2.5e-14 84.0 49 83.7
EL10Ac8g18949 Beta vulgaris HOM05D005195 ORTHO05D006088 2.8e-13 80.5 91 49.5
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 2.2e-10 70.9 43 76.7
Zm00001eb382840 Zea mays HOM05D003596 ORTHO05D004256 4.3e-06 56.6 37 67.6


User provided reference genes

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