Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 6.6e-275 950.3 546 100.0
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 1.9e-157 560.1 360 79.7
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 2.5e-157 559.7 357 80.7
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 3.6e-156 555.8 369 78.3
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 7.8e-151 538.1 365 79.7
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 8.6e-150 534.6 366 76.5
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 1.6e-148 530.4 366 76.5
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 2.1e-148 530.0 366 77.0
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 2.1e-148 530.0 359 78.6
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 2.8e-148 529.6 367 73.3
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 8.1e-148 528.1 368 73.9
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.1e-147 526.2 363 76.6
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 4.0e-147 525.8 386 72.5
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 6.8e-147 525.0 383 72.8
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 6.8e-147 525.0 383 72.8
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 8.9e-147 524.6 380 74.2
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.6e-146 523.1 347 75.5
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 2.6e-146 523.1 365 72.1
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 3.4e-146 522.7 363 76.3
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.4e-146 522.7 363 76.3
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.4e-146 522.7 359 77.2
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 7.5e-146 521.5 366 75.1
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 9.9e-146 521.2 359 77.2
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 9.9e-146 521.2 381 75.1
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 1.7e-145 520.4 368 74.2
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 2.2e-145 520.0 376 74.2
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 1.1e-144 517.7 391 71.4
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.4e-144 517.3 377 72.4
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.4e-144 517.3 359 76.6
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 1.9e-144 516.9 363 73.6
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.9e-144 516.9 357 73.4
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 2.4e-144 516.5 361 75.3
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 3.2e-144 516.2 357 73.7
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 9.2e-144 514.6 362 76.8
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 9.2e-144 514.6 356 77.5
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.2e-143 514.2 368 75.3
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 1.2e-143 514.2 373 74.0
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.6e-143 513.8 361 77.0
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 2.1e-143 513.5 364 75.8
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 2.1e-143 513.5 367 74.1
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 3.5e-143 512.7 342 75.1
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 3.5e-143 512.7 366 75.1
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 6.0e-143 511.9 378 74.3
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 6.0e-143 511.9 378 74.3
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 6.0e-143 511.9 353 77.6
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.0e-142 511.1 357 76.5
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 1.3e-142 510.8 352 74.7
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 1.7e-142 510.4 359 74.9
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 2.3e-142 510.0 373 69.7
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 3.0e-142 509.6 371 72.2
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 3.0e-142 509.6 369 72.4
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 3.9e-142 509.2 357 75.6
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 5.1e-142 508.8 346 76.6
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 6.6e-142 508.4 368 74.5
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 1.1e-141 507.7 376 73.9
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 1.9e-141 506.9 355 73.2
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 1.9e-141 506.9 346 77.2
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.9e-141 506.9 355 75.5
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 1.9e-141 506.9 376 73.1
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.5e-141 506.5 355 75.5
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 2.5e-141 506.5 381 73.2
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 3.3e-141 506.1 363 75.2
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 3.3e-141 506.1 355 73.5
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 3.3e-141 506.1 363 75.5
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 3.3e-141 506.1 360 71.1
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 4.3e-141 505.8 381 73.5
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 4.3e-141 505.8 360 70.8
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 5.6e-141 505.4 399 69.4
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 7.3e-141 505.0 392 70.2
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 7.3e-141 505.0 366 70.2
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 9.5e-141 504.6 355 75.2
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 1.2e-140 504.2 376 74.5
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 1.6e-140 503.8 367 72.2
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 2.1e-140 503.4 362 69.6
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 4.7e-140 502.3 369 69.4
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 8.1e-140 501.5 380 70.3
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 1.1e-139 501.1 381 73.0
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 1.1e-139 501.1 361 74.8
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 1.8e-139 500.4 380 73.2
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 1.8e-139 500.4 359 75.8
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.8e-139 500.4 350 75.4
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 4.0e-139 499.2 361 69.0
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 6.8e-139 498.4 349 71.6
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 8.9e-139 498.0 347 72.6
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.2e-138 497.7 365 71.5
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 1.5e-138 497.3 333 74.8
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 1.5e-138 497.3 325 76.6
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 2.0e-138 496.9 354 70.6
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 2.0e-138 496.9 359 70.5
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 2.0e-138 496.9 379 71.2
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 2.6e-138 496.5 375 70.7
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 5.8e-138 495.4 365 68.2
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 1.3e-137 494.2 364 72.0
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 4.9e-137 492.3 347 76.4
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 6.4e-137 491.9 302 79.5
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 6.4e-137 491.9 359 71.6
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 8.4e-137 491.5 370 73.2
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 1.1e-136 491.1 378 65.9
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.4e-136 490.7 370 73.0
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.4e-136 490.7 360 70.3
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 1.9e-136 490.3 397 68.5
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 4.1e-136 489.2 314 76.8
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 7.1e-136 488.4 370 67.6
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 9.2e-136 488.0 338 76.0
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 9.2e-136 488.0 370 73.0
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 2.3e-134 483.4 453 59.6
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 3.9e-134 482.6 325 73.8
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 1.1e-133 481.1 338 72.8
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 1.5e-133 480.7 302 77.5
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 2.5e-133 479.9 347 70.3
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 5.6e-133 478.8 356 68.3
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 7.3e-133 478.4 352 69.0
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 4.7e-132 475.7 359 67.4
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 6.2e-132 475.3 339 70.5
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.1e-131 474.6 343 70.8
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 3.1e-131 473.0 374 70.1
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 9.0e-131 471.5 357 67.5
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 1.2e-130 471.1 321 73.2
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 2.2e-129 466.8 348 68.7
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 1.9e-128 463.8 307 72.6
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 2.4e-128 463.4 339 69.3
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 4.2e-128 462.6 297 77.1
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 2.7e-127 459.9 330 70.9
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 2.8e-124 449.9 309 72.5
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 3.1e-123 446.4 303 77.9
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 2.0e-122 443.7 367 63.8
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 7.6e-122 441.8 265 81.1
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 2.9e-121 439.9 365 65.8
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 5.4e-120 435.6 350 70.6
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 2.1e-119 433.7 271 78.2
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.6e-119 432.6 368 63.9
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 1.9e-117 427.2 294 76.9
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 6.2e-116 422.2 322 69.3
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 2.6e-114 416.8 378 63.5
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 2.2e-113 413.7 295 66.4
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.4e-112 410.2 337 68.0
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 7.1e-112 408.7 379 55.7
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 7.9e-111 405.2 356 64.3
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 6.7e-110 402.1 294 65.3
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 2.5e-109 400.2 381 57.7
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 4.3e-109 399.4 358 57.0
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.5e-106 391.0 378 54.5
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 3.4e-106 389.8 301 62.8
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 8.4e-105 385.2 328 58.8
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 5.5e-104 382.5 236 78.0
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 6.0e-103 379.0 339 61.7
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 6.9e-99 365.5 399 51.9
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 1.9e-96 357.5 221 80.5
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 2.2e-89 334.0 243 70.0
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 6.3e-84 315.8 294 54.8
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 8.2e-76 288.9 207 66.2
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 7.2e-72 275.8 252 61.9
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 4.7e-71 273.1 362 49.2
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 1.1e-56 225.3 150 74.0
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 4.7e-55 219.9 172 66.3
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 1.8e-54 218.0 144 71.5
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 1.2e-42 178.7 155 58.7
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 7.0e-35 152.9 96 78.1
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 4.4e-29 133.7 100 64.0
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 6.0e-26 123.2 305 29.2
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 2.8e-23 114.4 335 26.9
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.8e-22 111.7 238 35.7
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 2.4e-22 111.3 64 79.7
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 2.2e-20 104.8 289 27.7
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 1.9e-19 101.7 68 75.0
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 1.9e-19 101.7 68 75.0
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 7.1e-19 99.8 68 75.0
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 3.3e-16 90.9 71 64.8
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 9.6e-16 89.4 59 72.9
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 8.1e-15 86.3 383 23.5
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 1.3e-12 79.0 109 36.7
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 3.8e-12 77.4 90 65.6
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 1.1e-11 75.9 89 62.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 4.3e-08 63.9 35 80.0
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 4.3e-08 63.9 41 73.2
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 7.3e-08 63.2 41 70.7
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 9.6e-08 62.8 39 74.4
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 1.3e-07 62.4 32 81.2
HanXRQChr05g0141861 Helianthus annuus HOM05D000001 ORTHO05D009862 9.0e-06 56.2 50 58.0


User provided reference genes

Program Settings