Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund08629 Selenicereus undatus HOM05D005313 ORTHO05D006317 9.3e-173 610.1 316 100.0
AUR62017725 Chenopodium quinoa HOM05D005313 ORTHO05D006317 2.8e-153 545.4 311 89.4
EL10Ac7g15995 Beta vulgaris HOM05D005313 ORTHO05D006317 3.5e-151 538.5 311 88.7
Sc14g0007170 Simmondsia chinensis HOM05D005313 ORTHO05D006317 1.6e-148 529.6 311 86.2
AUR62032955 Chenopodium quinoa HOM05D005313 ORTHO05D006317 5.7e-146 521.2 353 78.8
TWI31G1405 Tripterygium wilfordii HOM05D005313 ORTHO05D006317 7.4e-146 520.8 311 83.6
QL01p001863 Quercus lobata HOM05D005313 ORTHO05D006317 1.7e-145 519.6 310 83.2
Potri.008G128900 Populus trichocarpa HOM05D005313 ORTHO05D006317 4.8e-145 518.1 311 84.2
Thecc.02G280500 Theobroma cacao HOM05D005313 ORTHO05D006317 1.4e-144 516.5 311 83.3
GSVIVG01011763001 Vitis vinifera HOM05D005313 ORTHO05D006317 3.1e-144 515.4 311 84.2
Gorai.002G179900 Gossypium raimondii HOM05D005313 ORTHO05D006317 9.1e-144 513.8 311 83.0
Ah.01g012630 Amaranthus hybridus HOM05D005313 ORTHO05D006317 1.2e-143 513.5 308 85.7
COL.COLO4_20475 Corchorus olitorius HOM05D005313 ORTHO05D006317 1.6e-143 513.1 315 82.5
Gohir.A01G152800 Gossypium hirsutum HOM05D005313 ORTHO05D006317 1.6e-143 513.1 311 83.3
Atru.chr9.122 Acer truncatum HOM05D005313 ORTHO05D006317 3.5e-143 511.9 311 82.0
Cfa008602 Carpinus fangiana HOM05D005313 ORTHO05D006317 4.5e-143 511.5 311 83.0
Lalb_Chr17g0338641 Lupinus albus HOM05D005313 ORTHO05D006317 1.7e-142 509.6 311 81.4
Gohir.D01G145600 Gossypium hirsutum HOM05D005313 ORTHO05D006317 3.8e-142 508.4 311 82.0
CSS0048776 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 8.5e-142 507.3 311 81.7
Prupe.1G323900 Prunus persica HOM05D005313 ORTHO05D006317 1.1e-141 506.9 315 81.3
MD16G1029000 Malus domestica HOM05D005313 ORTHO05D006317 1.9e-141 506.1 315 81.3
Phvul.003G023500 Phaseolus vulgaris HOM05D005313 ORTHO05D006317 1.9e-141 506.1 311 81.4
CANSAT01G3269 Cannabis sativa HOM05D005313 ORTHO05D006317 5.5e-141 504.6 311 80.7
Glyma.02G238100 Glycine max HOM05D005313 ORTHO05D006317 7.2e-141 504.2 311 80.7
PSO384G2037 Papaver somniferum HOM05D005313 ORTHO05D006317 7.2e-141 504.2 311 80.7
Glyma.09G118600 Glycine max HOM05D005313 ORTHO05D006317 9.4e-141 503.8 311 80.7
Eucgr.G02191 Eucalyptus grandis HOM05D005313 ORTHO05D006317 1.2e-140 503.4 311 80.7
Manes.17G006600 Manihot esculenta HOM05D005313 ORTHO05D006317 1.2e-140 503.4 311 79.7
PGR119G0894 Punica granatum HOM05D005313 ORTHO05D006317 1.2e-140 503.4 311 81.0
RcHm_v2.0_Chr4g0441121 Rosa chinensis HOM05D005313 ORTHO05D006317 1.2e-140 503.4 315 80.6
TAR623G0220 Trochodendron aralioides HOM05D005313 ORTHO05D006317 1.6e-140 503.1 311 80.1
FvH4_4g32330 Fragaria vesca HOM05D005313 ORTHO05D006317 2.1e-140 502.7 315 80.3
Psat6g042560 Pisum sativum HOM05D005313 ORTHO05D006317 2.1e-140 502.7 311 81.4
Lj6A747T68 Lonicera japonica HOM05D005313 ORTHO05D006317 3.6e-140 501.9 311 81.7
PSO339G3364 Papaver somniferum HOM05D005313 ORTHO05D006317 1.0e-139 500.4 311 80.7
VMungo1215G0481 Vigna mungo HOM05D005313 ORTHO05D006317 1.0e-139 500.4 311 80.4
Rhsim02G0199800 Rhododendron simsii HOM05D005313 ORTHO05D006317 1.4e-139 500.0 311 80.7
Thhalv10000908m.g Eutrema salsugineum HOM05D005313 ORTHO05D006317 2.3e-139 499.2 311 80.4
vmacro10642 Vaccinium macrocarpon HOM05D005313 ORTHO05D006317 2.3e-139 499.2 311 82.0
Lj2g0003652 Lotus japonicus HOM05D005313 ORTHO05D006317 4.0e-139 498.4 311 80.4
MELO3C018332.2 Cucumis melo HOM05D005313 ORTHO05D006317 6.8e-139 497.7 311 80.7
Sopen05g004020 Solanum pennellii HOM05D005313 ORTHO05D006317 6.8e-139 497.7 311 81.4
CsaV3_5G013570 Cucumis sativus L. HOM05D005313 ORTHO05D006317 8.8e-139 497.3 311 80.7
HanXRQChr15g0488661 Helianthus annuus HOM05D005313 ORTHO05D006317 8.8e-139 497.3 311 80.7
Medtr1g030750 Medicago truncatula HOM05D005313 ORTHO05D006317 8.8e-139 497.3 311 80.7
Sed0021241 Sechium edule HOM05D005313 ORTHO05D006317 2.0e-138 496.1 311 80.7
FAN17G2517 Fragaria x ananassa HOM05D005313 ORTHO05D006317 2.6e-138 495.7 322 78.6
Lsat_1_v5_gn_3_54641 Lactuca sativa HOM05D005313 ORTHO05D006317 2.6e-138 495.7 311 81.0
Cc11_g08770 Coffea canephora HOM05D005313 ORTHO05D006317 3.4e-138 495.4 311 79.4
ECA246G2448 Erigeron canadensis HOM05D005313 ORTHO05D006317 3.4e-138 495.4 311 79.7
Solyc05g008180.3 Solanum lycopersicum HOM05D005313 ORTHO05D006317 3.4e-138 495.4 311 81.0
SalBow4G0219 Salvia bowleyana HOM05D005313 ORTHO05D006317 1.3e-137 493.4 311 80.7
FAN22G0311 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.7e-137 493.0 322 78.0
BcaB07g30404 Brassica carinata HOM05D005313 ORTHO05D006317 2.8e-137 492.3 311 79.4
PGSC0003DMG400030501 Solanum tuberosum HOM05D005313 ORTHO05D006317 2.8e-137 492.3 311 80.7
Peaxi162Scf00159g00112 Petunia axillaris HOM05D005313 ORTHO05D006317 3.7e-137 491.9 316 80.1
THA.LOC104805057 Tarenaya hassleriana HOM05D005313 ORTHO05D006317 3.7e-137 491.9 311 79.1
Oeu024584.1 Olea europaea HOM05D005313 ORTHO05D006317 6.3e-137 491.1 329 76.9
Sp2g12800 Schrenkiella parvula HOM05D005313 ORTHO05D006317 8.3e-137 490.7 311 79.1
AT2G01350 Arabidopsis thaliana HOM05D005313 ORTHO05D006317 1.1e-136 490.3 311 79.4
CARHR143870 Cardamine hirsuta HOM05D005313 ORTHO05D006317 1.1e-136 490.3 311 78.8
Nitab4.5_0000742g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 3.1e-136 488.8 311 79.4
Peaxi162Scf00450g00614 Petunia axillaris HOM05D005313 ORTHO05D006317 3.1e-136 488.8 316 79.4
Carub.0005s0033 Capsella rubella HOM05D005313 ORTHO05D006317 5.3e-136 488.0 311 79.4
CDE05G1915 Ceratophyllum demersum HOM05D005313 ORTHO05D006317 5.3e-136 488.0 311 77.5
AL5G10310 Arabidopsis lyrata HOM05D005313 ORTHO05D006317 7.0e-136 487.6 311 78.5
Sabra08G0097700 Salix brachista HOM05D005313 ORTHO05D006317 7.0e-136 487.6 372 70.4
MSTRG.895 Avicennia marina HOM05D005313 ORTHO05D006317 9.1e-136 487.3 311 79.1
Aqoxy1G00025 Aquilegia oxysepala HOM05D005313 ORTHO05D006317 2.0e-135 486.1 314 78.7
C02p49400 Brassica napus HOM05D005313 ORTHO05D006317 2.0e-135 486.1 311 78.8
HPP92_025383 Vanilla planifolia HOM05D005313 ORTHO05D006317 2.7e-135 485.7 311 77.2
A02p31910 Brassica napus HOM05D005313 ORTHO05D006317 3.5e-135 485.3 311 78.5
BraA02t08201Z Brassica rapa HOM05D005313 ORTHO05D006317 3.5e-135 485.3 311 78.5
Aa31LG2G8560 Aethionema arabicum HOM05D005313 ORTHO05D006317 7.7e-135 484.2 321 76.9
BolC2t11026H Brassica oleracea HOM05D005313 ORTHO05D006317 1.0e-134 483.8 311 78.5
FAN07G2253 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.7e-134 483.0 340 73.5
BcaC03g17029 Brassica carinata HOM05D005313 ORTHO05D006317 2.9e-134 482.3 311 78.1
Ca_25713_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 2.9e-134 482.3 345 72.5
Os09g0553600 Oryza sativa ssp. japonica HOM05D005313 ORTHO05D006317 3.8e-134 481.9 315 75.2
Zm00001eb104420 Zea mays HOM05D005313 ORTHO05D006317 1.1e-133 480.3 314 75.5
CAN.G1334.2 Capsicum annuum HOM05D005313 ORTHO05D006317 1.6e-127 459.9 287 81.9
Haze_11011 Corylus avellana HOM05D005313 ORTHO05D006317 5.9e-127 458.0 278 81.7
Dinv17424 Davidia involucrata HOM05D005313 ORTHO05D006317 1.3e-126 456.8 278 82.4
Duzib248G1582 Durio zibethinus HOM05D005313 ORTHO05D006317 2.5e-125 452.6 311 74.9
Pp3c8_18030 Physcomitrium patens HOM05D005313 ORTHO05D006317 1.4e-123 446.8 312 70.8
SGA_v2.0_scaffold50G18517 Striga asiatica HOM05D005313 ORTHO05D006317 4.4e-122 441.8 311 74.6
Cpa.g.sc65.129 Carica papaya HOM05D005313 ORTHO05D006317 5.7e-122 441.4 311 73.6
BcaC03g17031 Brassica carinata HOM05D005313 ORTHO05D006317 4.9e-121 438.3 311 74.0
SalBow4G0808 Salvia bowleyana HOM05D005313 ORTHO05D006317 4.9e-121 438.3 278 79.5
Ciclev10018157m.g Citrus clementina HOM05D005313 ORTHO05D006317 1.0e-118 430.6 264 81.1
FAN12G1743 Fragaria x ananassa HOM05D005313 ORTHO05D006317 7.3e-117 424.5 369 63.1
unitig_0.g2330 Utricularia gibba HOM05D005313 ORTHO05D006317 3.6e-116 422.2 319 69.9
Duzib248G1474 Durio zibethinus HOM05D005313 ORTHO05D006317 2.3e-115 419.5 258 80.6
CiPaw.06G012200 Carya illinoinensis HOM05D005313 ORTHO05D006317 1.2e-114 417.2 256 80.1
SMO164G0169 Selaginella moellendorffii HOM05D005313 ORTHO05D006317 4.9e-113 411.8 312 66.7
Nn2g15695 Nelumbo nucifera HOM05D005313 ORTHO05D006317 2.3e-110 402.9 311 70.1
Mapoly0011s0070 Marchantia polymorpha HOM05D005313 ORTHO05D006317 3.3e-109 399.1 297 66.7
Migut.L00987 Erythranthe guttata HOM05D005313 ORTHO05D006317 7.3e-109 397.9 256 77.0
CBR_g30917 Chara braunii HOM05D005313 ORTHO05D006317 8.9e-107 391.0 313 64.5
Nitab4.5_0004816g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 1.5e-106 390.2 242 81.8
arahy.Tifrunner.gnm1.ann1.Y1EHRK Arachis hypogaea HOM05D005313 ORTHO05D006317 9.2e-104 380.9 311 64.6
arahy.Tifrunner.gnm1.ann1.G5QWBZ Arachis hypogaea HOM05D005313 ORTHO05D006317 3.9e-102 375.6 320 63.1
SEGI_23840 Sequoiadendron giganteum HOM05D005313 ORTHO05D006317 2.5e-101 372.9 255 72.2
DCAR_023608 Daucus carota HOM05D005313 ORTHO05D006317 2.3e-94 349.7 221 80.5
MCO15G382 Micromonas commoda HOM05D005313 ORTHO05D006317 6.4e-89 331.6 301 56.8
Ca_12605_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 1.3e-84 317.4 198 78.8
Cre02.g141200 Chlamydomonas reinhardtii HOM05D005313 ORTHO05D006317 5.3e-83 312.0 312 55.4
PRCOL_00006420 Prasinoderma coloniale HOM05D005313 ORTHO05D006317 9.0e-83 311.2 302 54.0
ATR0807G196 Amborella trichopoda HOM05D005313 ORTHO05D006317 1.5e-82 310.5 192 80.7
AagrBONN_evm.TU.Sc2ySwM_117.3802 Anthoceros agrestis HOM05D005313 ORTHO05D006317 2.4e-80 303.1 230 63.9
ClCG07G006260 Citrullus lanatus HOM05D005313 ORTHO05D006317 6.0e-79 298.5 187 79.1
Zm00001eb320780 Zea mays HOM05D005313 ORTHO05D006317 5.3e-75 285.4 220 65.9
Dinv05167 Davidia involucrata HOM05D005313 ORTHO05D006317 7.4e-69 265.0 167 81.4
Potri.010G113500 Populus trichocarpa HOM05D005313 ORTHO05D006317 4.6e-63 245.7 188 65.4
Migut.L00982 Erythranthe guttata HOM05D005313 ORTHO05D006317 4.2e-56 222.6 311 45.3
CsaV3_UNG236450 Cucumis sativus L. HOM05D005313 ORTHO05D006317 5.5e-56 222.2 273 49.5
Actinidia26811 Actinidia chinensis HOM05D005313 ORTHO05D006317 3.3e-53 213.0 151 68.9
SHI04677 Sapria himalayana HOM05D005313 ORTHO05D006317 2.2e-52 210.3 160 65.6
A06p44480 Brassica napus HOM05D005313 ORTHO05D006317 4.8e-44 182.6 242 48.3
SHI04675 Sapria himalayana HOM05D005313 ORTHO05D006317 1.1e-40 171.4 118 71.2
Ca_31307_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 5.1e-38 162.5 280 35.4
AagrBONN_evm.TU.Sc2ySwM_368.1836 Anthoceros agrestis HOM05D005313 ORTHO05D006317 4.4e-37 159.5 123 63.4
Sabra10G0083500 Salix brachista HOM05D005313 ORTHO05D006317 1.1e-35 154.8 260 39.2
RcHm_v2.0_Chr2g0157601 Rosa chinensis HOM05D005313 ORTHO05D006317 1.0e-33 148.3 97 75.3
Actinidia14964 Actinidia chinensis HOM05D005313 ORTHO05D006317 3.8e-33 146.4 255 38.4
ClCG07G006250 Citrullus lanatus HOM05D005313 ORTHO05D006317 1.5e-32 144.4 91 75.8
Oeu045874.1 Olea europaea HOM05D005313 ORTHO05D006317 4.7e-31 139.4 140 57.9
TPR.G36891 Trifolium pratense HOM05D005313 ORTHO05D006317 2.3e-30 137.1 101 73.3
COL.COLO4_10085 Corchorus olitorius HOM05D005313 ORTHO05D006317 1.1e-29 134.8 85 75.3
Glyma.07G165500 Glycine max HOM05D005313 ORTHO05D006317 1.0e-25 121.7 81 72.8
CAN.G1020.2 Capsicum annuum HOM05D005313 ORTHO05D006317 4.1e-19 99.8 113 48.7
CSS0042289 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 2.7e-18 97.1 109 49.5
CsaV3_UNG236470 Cucumis sativus L. HOM05D005313 ORTHO05D006317 2.7e-18 97.1 60 78.3
MBI06_g07791_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.9e-18 95.9 59 83.1
Aa31LG11G8270 Aethionema arabicum HOM05D005313 ORTHO05D006317 8.5e-17 92.0 88 59.1
COL.COLO4_10084 Corchorus olitorius HOM05D005313 ORTHO05D006317 2.1e-15 87.4 54 74.1
TPR.G36912 Trifolium pratense HOM05D005313 ORTHO05D006317 1.0e-14 85.1 50 80.0
Aa31LG11G8280 Aethionema arabicum HOM05D005313 ORTHO05D006317 6.8e-14 82.4 62 64.5
BcaC06g31315 Brassica carinata HOM05D005313 ORTHO05D006317 7.5e-13 79.0 55 63.6
Actinidia01955 Actinidia chinensis HOM05D005313 ORTHO05D006317 1.7e-09 67.8 43 69.8
AagrBONN_evm.TU.Sc2ySwM_117.3801 Anthoceros agrestis HOM05D005313 ORTHO05D006317 8.0e-07 58.9 49 59.2


User provided reference genes

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