Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 4.2e-90 334.7 176 100.0
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 1.3e-59 233.4 181 69.1
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 4.3e-58 228.4 181 69.1
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 9.5e-58 227.3 181 69.1
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 1.4e-56 223.4 180 66.1
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 1.3e-46 190.3 187 60.4
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 1.9e-45 186.4 176 61.4
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 2.4e-45 186.0 176 59.1
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 2.4e-45 186.0 186 60.2
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 5.0e-43 178.3 182 58.2
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 6.6e-43 177.9 183 60.1
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 8.6e-43 177.6 183 60.1
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 8.6e-43 177.6 173 59.0
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 1.1e-42 177.2 182 56.0
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.5e-42 176.8 184 56.5
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 1.5e-42 176.8 181 59.1
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 4.3e-42 175.3 184 58.2
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 5.6e-42 174.9 189 52.9
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 1.2e-41 173.7 176 57.4
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 1.6e-41 173.3 169 58.6
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 2.8e-41 172.6 189 54.0
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 3.6e-41 172.2 148 65.5
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 3.6e-41 172.2 184 57.1
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 8.1e-41 171.0 183 57.4
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 1.1e-40 170.6 192 54.7
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.4e-40 170.2 183 56.8
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.8e-40 169.9 184 56.5
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 2.3e-40 169.5 178 55.6
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 4.0e-40 168.7 193 55.4
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 5.2e-40 168.3 191 54.5
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 6.8e-40 167.9 181 56.4
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 8.9e-40 167.5 182 54.4
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 8.9e-40 167.5 178 55.1
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 1.2e-39 167.2 170 56.5
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 1.5e-39 166.8 211 50.2
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 1.5e-39 166.8 178 54.5
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 2.0e-39 166.4 199 54.8
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 2.6e-39 166.0 184 51.1
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 3.4e-39 165.6 183 55.7
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 3.4e-39 165.6 183 55.7
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 3.4e-39 165.6 180 55.0
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 4.4e-39 165.2 187 53.5
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 9.9e-39 164.1 172 52.9
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 1.3e-38 163.7 181 53.0
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.7e-38 163.3 195 52.8
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 1.7e-38 163.3 197 51.8
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 2.2e-38 162.9 188 55.3
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 2.9e-38 162.5 178 55.6
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 2.9e-38 162.5 188 53.7
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 2.9e-38 162.5 195 52.3
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 3.7e-38 162.2 205 51.7
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 3.7e-38 162.2 174 55.2
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 4.9e-38 161.8 195 52.8
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 6.4e-38 161.4 177 54.8
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 1.1e-37 160.6 178 55.6
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 1.9e-37 159.8 178 53.9
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 2.4e-37 159.5 181 56.9
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 4.1e-37 158.7 208 50.5
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 4.1e-37 158.7 166 56.0
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 4.1e-37 158.7 197 51.8
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 5.4e-37 158.3 173 56.1
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 5.4e-37 158.3 173 56.1
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 9.2e-37 157.5 173 56.1
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 9.2e-37 157.5 173 56.1
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 9.2e-37 157.5 174 54.6
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 1.2e-36 157.1 177 52.5
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.2e-36 157.1 191 50.8
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.6e-36 156.8 165 54.5
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 1.6e-36 156.8 165 55.2
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 2.1e-36 156.4 197 49.7
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 2.7e-36 156.0 175 54.3
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 4.6e-36 155.2 200 49.5
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 4.6e-36 155.2 196 50.0
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 6.0e-36 154.8 176 53.4
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 6.0e-36 154.8 186 53.8
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 1.7e-35 153.3 182 52.7
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 1.7e-35 153.3 209 48.8
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 2.3e-35 152.9 197 47.2
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 3.0e-35 152.5 183 53.6
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 3.9e-35 152.1 198 49.5
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 1.1e-34 150.6 186 49.5
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 2.5e-34 149.4 173 53.2
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 4.3e-34 148.7 178 52.2
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 4.3e-34 148.7 180 52.2
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 7.3e-34 147.9 172 50.0
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 9.5e-34 147.5 198 48.5
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 1.2e-33 147.1 170 53.5
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 1.2e-33 147.1 172 52.9
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 1.6e-33 146.7 198 47.0
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 4.7e-33 145.2 177 49.7
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 4.7e-33 145.2 178 51.7
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 8.1e-33 144.4 176 51.1
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 1.4e-32 143.7 174 50.0
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 6.8e-32 141.4 220 43.2
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 6.8e-32 141.4 163 51.5
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 8.9e-32 141.0 194 48.5
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 1.2e-31 140.6 240 40.0
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 1.2e-31 140.6 194 47.4
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 2.0e-31 139.8 176 48.9
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 2.6e-31 139.4 177 46.9
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 4.4e-31 138.7 175 49.1
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 4.4e-31 138.7 191 47.6
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 5.8e-31 138.3 191 46.6
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 7.6e-31 137.9 159 50.3
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 7.6e-31 137.9 159 50.3
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 3.8e-30 135.6 188 48.4
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 4.9e-30 135.2 184 47.3
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 8.4e-30 134.4 192 45.3
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 7.1e-29 131.3 136 60.3
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 1.6e-28 130.2 174 46.6
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 1.3e-27 127.1 145 55.2
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 3.6e-25 119.0 226 38.9
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 3.6e-25 119.0 226 38.9
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 3.1e-24 115.9 117 58.1
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 4.0e-24 115.5 173 45.7
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 6.9e-24 114.8 177 41.2
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 9.0e-24 114.4 141 48.9
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 2.2e-22 109.8 134 51.5
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 1.3e-19 100.5 171 42.7
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 1.7e-19 100.1 123 52.8
DCAR_021623 Daucus carota HOM05D005391 ORTHO05D006694 3.9e-19 99.0 165 38.2
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 1.9e-18 96.7 169 39.1
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 9.6e-18 94.4 180 35.6
FAN23G0903 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.6e-17 93.6 164 42.1
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 4.8e-17 92.0 117 47.9
Hund13632 Selenicereus undatus HOM05D005391 ORTHO05D006694 4.0e-16 89.0 164 42.1
SMO364G0653 Selaginella moellendorffii HOM05D005391 ORTHO05D006694 9.0e-16 87.8 162 35.2
Os04g0388601 Oryza sativa ssp. japonica HOM05D005391 ORTHO05D006694 9.9e-15 84.3 161 37.9
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis HOM05D005391 ORTHO05D006694 2.9e-14 82.8 175 34.9
Gohir.1Z049409 Gossypium hirsutum HOM05D005391 ORTHO05D006694 2.4e-13 79.7 110 51.8
CSS0049043 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.3e-11 73.9 56 66.1
SEGI_13536 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 1.5e-10 70.5 107 43.9
Zm00001eb085410 Zea mays HOM05D005391 ORTHO05D006694 9.6e-10 67.8 120 38.3


User provided reference genes

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