Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 3.7e-238 827.8 406 100.0
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 8.3e-182 640.6 417 74.8
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 4.5e-180 634.8 411 75.7
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 1.1e-157 560.5 408 68.4
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 1.1e-157 560.5 407 67.1
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 2.4e-157 559.3 406 68.7
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 2.4e-157 559.3 405 68.1
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 3.2e-157 558.9 406 69.0
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 5.4e-157 558.1 406 69.0
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 1.6e-156 556.6 407 67.3
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 4.6e-156 555.1 407 67.8
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 6.0e-156 554.7 407 66.6
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 7.8e-156 554.3 407 66.1
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 1.0e-155 553.9 408 67.4
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 1.7e-155 553.1 407 68.1
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 6.6e-155 551.2 406 67.2
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 8.6e-155 550.8 407 67.1
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 2.5e-154 549.3 409 65.5
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 2.5e-154 549.3 408 66.2
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 4.3e-154 548.5 408 67.9
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 5.6e-154 548.1 407 67.6
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 7.3e-154 547.7 407 65.6
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 7.3e-154 547.7 406 66.3
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 9.5e-154 547.4 407 66.6
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 9.5e-154 547.4 409 66.3
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.6e-153 546.6 407 67.3
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 1.6e-153 546.6 408 66.2
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 2.1e-153 546.2 412 66.5
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 2.1e-153 546.2 412 66.3
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 6.2e-153 544.7 409 66.3
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 1.1e-152 543.9 407 65.4
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 2.4e-152 542.7 407 66.3
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 3.1e-152 542.3 408 65.9
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 5.2e-152 541.6 407 65.6
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 6.8e-152 541.2 408 65.7
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 1.5e-151 540.0 407 65.8
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 2.0e-151 539.7 412 65.5
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 2.9e-150 535.8 408 65.7
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 3.8e-150 535.4 407 65.4
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 8.4e-150 534.3 407 65.4
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 1.1e-149 533.9 409 65.0
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 1.4e-149 533.5 409 65.3
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 1.9e-149 533.1 407 65.6
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 4.1e-149 531.9 409 65.3
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 4.1e-149 531.9 407 65.1
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 5.4e-149 531.6 414 64.0
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 9.2e-149 530.8 414 65.5
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 4.6e-148 528.5 406 65.5
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 6.0e-148 528.1 421 64.8
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 6.0e-148 528.1 407 63.6
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 1.7e-147 526.6 407 63.6
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 1.7e-147 526.6 407 64.9
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 2.3e-147 526.2 406 64.3
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 3.0e-147 525.8 409 64.3
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 6.6e-147 524.6 401 64.8
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 6.6e-147 524.6 407 64.4
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 8.7e-147 524.2 408 63.2
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 8.7e-147 524.2 408 63.2
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.5e-146 523.5 410 63.4
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 1.5e-146 523.5 407 64.6
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 1.9e-146 523.1 407 63.9
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 1.9e-146 523.1 407 63.6
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 1.9e-146 523.1 408 64.5
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 3.3e-146 522.3 408 64.2
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 3.3e-146 522.3 401 64.1
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 7.3e-146 521.2 452 59.7
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 9.6e-146 520.8 408 63.5
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 9.6e-146 520.8 408 63.5
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.6e-145 520.0 406 63.5
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 4.7e-145 518.5 409 63.3
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 4.7e-145 518.5 412 63.1
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 1.4e-144 516.9 408 63.2
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 2.4e-144 516.2 398 65.1
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 5.2e-144 515.0 409 62.8
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 9.0e-144 514.2 413 61.5
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 1.3e-142 510.4 408 60.5
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 2.9e-142 509.2 430 60.2
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 1.1e-141 507.3 407 62.7
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 4.6e-140 501.9 408 61.8
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 6.0e-140 501.5 451 57.6
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 3.3e-138 495.7 428 59.6
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 2.0e-135 486.5 404 62.1
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 4.5e-135 485.3 483 54.9
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 8.4e-134 481.1 439 57.6
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 8.4e-134 481.1 439 57.6
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 1.0e-131 474.2 369 64.5
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 3.0e-131 472.6 366 64.8
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 5.1e-131 471.9 393 61.8
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 6.7e-131 471.5 405 61.0
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 3.3e-130 469.2 408 57.8
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 9.6e-130 467.6 409 59.9
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 1.6e-129 466.8 401 59.6
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 8.1e-129 464.5 401 58.9
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 3.4e-127 459.1 408 56.4
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 7.6e-127 458.0 400 61.0
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 4.9e-126 455.3 401 58.4
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 2.4e-125 453.0 406 56.7
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 2.4e-125 453.0 400 59.2
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 2.1e-124 449.9 401 56.6
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 2.7e-124 449.5 401 60.1
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 7.9e-124 448.0 401 57.4
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 6.7e-123 444.9 410 58.3
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 1.9e-122 443.4 403 58.6
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 2.5e-122 443.0 347 62.8
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 7.4e-122 441.4 383 57.2
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 3.1e-120 436.0 401 56.9
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 9.0e-120 434.5 407 56.8
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 1.5e-119 433.7 335 63.6
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 2.1e-116 423.3 366 57.9
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 3.5e-116 422.5 400 55.0
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 4.6e-116 422.2 328 61.0
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.0e-115 421.0 403 54.8
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 1.3e-115 420.6 400 54.8
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 9.7e-114 414.5 319 62.4
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 3.7e-113 412.5 403 53.6
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 4.8e-113 412.1 403 53.8
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 6.3e-113 411.8 403 53.8
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 1.2e-111 407.5 392 55.9
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 1.5e-111 407.1 364 57.7
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 5.0e-110 402.1 406 52.5
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 8.5e-110 401.4 388 53.4
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 7.9e-108 394.8 321 58.6
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 2.0e-106 390.2 404 52.0
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 3.3e-106 389.4 404 51.5
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 1.2e-103 380.9 404 51.0
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 8.5e-102 374.8 399 50.6
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 5.5e-101 372.1 408 51.7
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 1.2e-100 370.9 253 69.2
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 1.8e-99 367.1 360 52.8
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 1.8e-99 367.1 360 52.8
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 3.0e-99 366.3 390 49.5
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 3.9e-99 365.9 360 52.5
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 3.1e-96 356.3 262 69.1
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 1.4e-93 347.4 361 51.8
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 3.0e-91 339.7 398 46.2
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 5.2e-91 339.0 341 52.8
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 2.0e-90 337.0 272 61.4
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.7e-89 334.0 265 60.4
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 7.7e-87 325.1 404 44.8
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.1e-85 321.2 277 57.0
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 4.2e-85 319.3 413 42.9
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 1.2e-84 317.8 339 49.9
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 4.7e-84 315.8 401 43.1
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 1.4e-83 314.3 253 60.5
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 5.2e-83 312.4 232 64.2
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 6.3e-81 305.4 258 57.4
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 3.5e-79 299.7 266 57.9
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 3.3e-69 266.5 283 51.6
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 1.6e-68 264.2 366 43.7
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 2.8e-65 253.4 193 62.7
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 1.0e-59 235.0 461 33.4
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.0e-59 235.0 160 66.2
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 9.5e-45 185.3 132 73.5
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 3.1e-43 180.3 151 64.9
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 4.9e-41 172.9 366 33.1
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 1.9e-40 171.0 450 28.2
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 1.3e-38 164.9 137 65.7
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 3.1e-35 153.7 112 67.0
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 2.6e-34 150.6 136 58.1
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 1.2e-31 141.7 325 28.6
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 2.1e-28 131.0 227 35.2
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 4.0e-27 126.7 387 30.0
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 1.5e-26 124.8 227 35.2
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 2.3e-22 110.9 68 70.6
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 2.6e-18 97.4 113 46.0
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 4.5e-18 96.7 68 70.6
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 3.8e-17 93.6 95 54.7
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.3e-12 78.6 54 68.5
Psat7g177720 Pisum sativum HOM05D003933 ORTHO05D004746 1.1e-11 75.5 44 86.4
PGSC0003DMG401019957 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.2e-09 67.8 64 54.7
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 1.8e-06 58.2 42 69.0
BcaC03g13212 Brassica carinata HOM05D003933 ORTHO05D004746 2.3e-06 57.8 136 33.1
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 3.0e-06 57.4 37 67.6


User provided reference genes

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