Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 8.9e-87 323.6 161 100.0
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 7.6e-62 240.7 157 73.9
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 7.6e-62 240.7 157 73.9
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 1.6e-56 223.0 188 59.6
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 3.6e-56 221.9 157 68.2
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 2.4e-55 219.2 157 68.2
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 4.0e-55 218.4 154 67.5
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 3.4e-54 215.3 163 66.9
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 3.4e-54 215.3 158 67.7
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 3.2e-52 208.8 161 64.0
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 9.3e-52 207.2 156 65.4
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 1.6e-51 206.5 162 64.8
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 2.1e-51 206.1 156 66.0
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 2.1e-51 206.1 166 62.7
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 2.7e-51 205.7 157 62.4
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 1.0e-50 203.8 158 62.7
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 1.3e-50 203.4 156 63.5
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 1.3e-50 203.4 157 62.4
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 1.8e-50 203.0 162 61.1
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 3.0e-50 202.2 171 62.0
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 3.9e-50 201.8 158 65.2
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 6.7e-50 201.1 162 63.6
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 6.7e-50 201.1 155 60.0
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 8.7e-50 200.7 157 61.1
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.1e-49 200.3 175 60.6
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 1.5e-49 199.9 166 62.7
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 1.9e-49 199.5 158 62.7
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 3.3e-49 198.7 159 62.3
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 5.6e-49 198.0 162 63.6
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 9.6e-49 197.2 155 63.9
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 2.8e-48 195.7 156 61.5
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 3.7e-48 195.3 169 62.1
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 6.2e-48 194.5 162 60.5
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 2.4e-47 192.6 171 55.6
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 3.1e-47 192.2 146 63.0
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 5.3e-47 191.4 167 59.3
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 1.2e-46 190.3 166 59.6
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.0e-46 189.5 166 60.8
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 4.5e-46 188.3 162 59.3
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 4.9e-45 184.9 156 60.3
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 1.9e-44 183.0 156 59.0
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 2.4e-44 182.6 154 60.4
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 7.1e-44 181.0 164 56.7
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 2.1e-43 179.5 155 60.0
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 6.0e-43 177.9 201 51.2
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 2.3e-42 176.0 155 56.8
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 2.3e-42 176.0 160 55.6
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 3.0e-42 175.6 165 55.2
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 3.9e-42 175.3 169 53.3
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 6.7e-42 174.5 153 56.2
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 6.7e-42 174.5 173 53.8
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.1e-41 173.7 167 54.5
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 2.5e-41 172.6 165 57.6
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 2.1e-40 169.5 148 56.8
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 3.7e-40 168.7 157 56.7
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 3.7e-40 168.7 168 54.2
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 8.2e-40 167.5 156 51.9
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 4.0e-39 165.2 171 51.5
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 4.0e-39 165.2 144 55.6
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 5.3e-39 164.9 156 50.6
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 1.2e-38 163.7 126 61.9
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 5.8e-38 161.4 155 51.6
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 1.0e-37 160.6 161 52.8
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 1.0e-37 160.6 154 52.6
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 3.8e-37 158.7 159 52.8
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 6.5e-37 157.9 148 52.7
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 1.1e-36 157.1 156 50.6
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 3.2e-36 155.6 175 49.1
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 9.3e-36 154.1 159 48.4
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 9.3e-36 154.1 159 48.4
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 9.3e-36 154.1 159 48.4
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 1.6e-35 153.3 156 49.4
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 1.6e-35 153.3 156 48.7
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 2.1e-35 152.9 159 48.4
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 2.1e-35 152.9 159 48.4
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 2.1e-35 152.9 159 48.4
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 2.7e-35 152.5 156 50.6
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 3.5e-35 152.1 156 48.7
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 4.6e-35 151.8 157 47.8
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 1.0e-34 150.6 157 48.4
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 2.3e-34 149.4 164 46.3
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 3.9e-34 148.7 168 45.8
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.6e-32 143.3 153 46.4
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 1.8e-31 139.8 153 45.8
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.8e-31 139.8 160 46.2
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 1.5e-30 136.7 137 51.1
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 4.5e-30 135.2 133 50.4
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 5.9e-30 134.8 153 44.4
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 2.9e-29 132.5 96 64.6
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 3.8e-29 132.1 152 46.1
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 6.1e-27 124.8 117 59.0
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 2.5e-25 119.4 151 45.0
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 2.2e-21 106.3 163 40.5
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 3.2e-20 102.4 80 63.8
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 9.4e-20 100.9 130 40.0
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 9.4e-20 100.9 105 47.6
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 3.3e-17 92.4 117 47.0
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 5.7e-17 91.7 66 63.6
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 3.7e-16 89.0 86 53.5
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 5.9e-14 81.6 96 43.8
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 3.0e-10 69.3 44 70.5
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 1.3e-08 63.9 46 58.7


User provided reference genes

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