Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund08219 Selenicereus undatus HOM05D005440 ORTHO05D007314 1.9e-46 188.7 89 100.0
EL10Ac9g22859 Beta vulgaris HOM05D005440 ORTHO05D007314 1.0e-39 166.4 86 89.5
AUR62017608 Chenopodium quinoa HOM05D005440 ORTHO05D007314 3.8e-39 164.5 86 86.0
AUR62015149 Chenopodium quinoa HOM05D005440 ORTHO05D007314 5.5e-38 160.6 86 84.9
Cc07_g20260 Coffea canephora HOM05D005440 ORTHO05D007314 1.2e-37 159.5 86 86.0
FAN02G0818 Fragaria x ananassa HOM05D005440 ORTHO05D007314 1.6e-37 159.1 86 84.9
Medtr3g081180 Medicago truncatula HOM05D005440 ORTHO05D007314 2.1e-37 158.7 86 84.9
Ah.01g013380 Amaranthus hybridus HOM05D005440 ORTHO05D007314 2.7e-37 158.3 86 83.7
Lalb_Chr24g0402811 Lupinus albus HOM05D005440 ORTHO05D007314 3.6e-37 157.9 86 84.9
FvH4_6g39770 Fragaria vesca HOM05D005440 ORTHO05D007314 4.7e-37 157.5 86 83.7
FAN14G2598 Fragaria x ananassa HOM05D005440 ORTHO05D007314 4.7e-37 157.5 86 83.7
PSO541G5910 Papaver somniferum HOM05D005440 ORTHO05D007314 8.0e-37 156.8 86 84.9
PSO675G6996 Papaver somniferum HOM05D005440 ORTHO05D007314 8.0e-37 156.8 86 84.9
Ciclev10011552m.g Citrus clementina HOM05D005440 ORTHO05D007314 1.0e-36 156.4 86 83.7
Sc15g0002420 Simmondsia chinensis HOM05D005440 ORTHO05D007314 1.0e-36 156.4 86 82.6
CANSAT64G0070 Cannabis sativa HOM05D005440 ORTHO05D007314 1.4e-36 156.0 86 84.9
Ca_16308_v3 Cicer arietinum L. HOM05D005440 ORTHO05D007314 1.4e-36 156.0 86 82.6
Potri.006G023400 Populus trichocarpa HOM05D005440 ORTHO05D007314 1.8e-36 155.6 87 85.1
Haze_13637 Corylus avellana HOM05D005440 ORTHO05D007314 2.3e-36 155.2 87 81.6
TPR.G33572 Trifolium pratense HOM05D005440 ORTHO05D007314 2.3e-36 155.2 86 83.7
HanXRQChr15g0468881 Helianthus annuus HOM05D005440 ORTHO05D007314 3.0e-36 154.8 87 82.8
Lalb_Chr22g0360841 Lupinus albus HOM05D005440 ORTHO05D007314 3.9e-36 154.5 86 83.7
MD09G1136900 Malus domestica HOM05D005440 ORTHO05D007314 3.9e-36 154.5 86 82.6
MD17G1127100 Malus domestica HOM05D005440 ORTHO05D007314 3.9e-36 154.5 86 81.4
Prupe.3G188100 Prunus persica HOM05D005440 ORTHO05D007314 3.9e-36 154.5 86 82.6
PGR004G2684 Punica granatum HOM05D005440 ORTHO05D007314 3.9e-36 154.5 86 81.4
Atru.chr5.954 Acer truncatum HOM05D005440 ORTHO05D007314 5.2e-36 154.1 86 82.6
CAN.G1156.52 Capsicum annuum HOM05D005440 ORTHO05D007314 8.8e-36 153.3 86 82.6
ECA233G3205 Erigeron canadensis HOM05D005440 ORTHO05D007314 8.8e-36 153.3 87 82.8
Solyc05g056520.4 Solanum lycopersicum HOM05D005440 ORTHO05D007314 8.8e-36 153.3 86 82.6
Sopen05g034920 Solanum pennellii HOM05D005440 ORTHO05D007314 8.8e-36 153.3 86 82.6
Psat5g108080 Pisum sativum HOM05D005440 ORTHO05D007314 1.1e-35 152.9 86 81.4
Potri.016G021900 Populus trichocarpa HOM05D005440 ORTHO05D007314 1.1e-35 152.9 87 82.8
Manes.09G077000 Manihot esculenta HOM05D005440 ORTHO05D007314 1.5e-35 152.5 86 82.6
Os05g0511300 Oryza sativa ssp. japonica HOM05D005440 ORTHO05D007314 1.5e-35 152.5 86 82.6
arahy.Tifrunner.gnm1.ann1.TU4NXX Arachis hypogaea HOM05D005440 ORTHO05D007314 2.0e-35 152.1 86 82.6
MELO3C026396.2 Cucumis melo HOM05D005440 ORTHO05D007314 2.0e-35 152.1 86 82.6
Glyma.13G003900 Glycine max HOM05D005440 ORTHO05D007314 2.0e-35 152.1 86 82.6
Thecc.01G171200 Theobroma cacao HOM05D005440 ORTHO05D007314 2.0e-35 152.1 86 81.4
Hma1.2p1_1803F.1_g302990 Hydrangea macrophylla HOM05D005440 ORTHO05D007314 2.6e-35 151.8 86 81.4
Sed0022130 Sechium edule HOM05D005440 ORTHO05D007314 2.6e-35 151.8 86 82.6
Dinv02983 Davidia involucrata HOM05D005440 ORTHO05D007314 3.3e-35 151.4 86 81.4
Peaxi162Scf00525g00411 Petunia axillaris HOM05D005440 ORTHO05D007314 3.3e-35 151.4 86 81.4
Potri.016G021400 Populus trichocarpa HOM05D005440 ORTHO05D007314 3.3e-35 151.4 87 81.6
RcHm_v2.0_Chr2g0153881 Rosa chinensis HOM05D005440 ORTHO05D007314 3.3e-35 151.4 86 81.4
HPP92_001868 Vanilla planifolia HOM05D005440 ORTHO05D007314 3.3e-35 151.4 87 81.6
Cfa023527 Carpinus fangiana HOM05D005440 ORTHO05D007314 4.4e-35 151.0 87 79.3
Migut.L00575 Erythranthe guttata HOM05D005440 ORTHO05D007314 4.4e-35 151.0 86 80.2
CsaV3_4G032220 Cucumis sativus L. HOM05D005440 ORTHO05D007314 5.7e-35 150.6 86 81.4
Phvul.006G001800 Phaseolus vulgaris HOM05D005440 ORTHO05D007314 5.7e-35 150.6 86 81.4
Sabra16G0024900 Salix brachista HOM05D005440 ORTHO05D007314 5.7e-35 150.6 87 80.5
Sabra16G0027400 Salix brachista HOM05D005440 ORTHO05D007314 5.7e-35 150.6 87 80.5
SalBow5G0813 Salvia bowleyana HOM05D005440 ORTHO05D007314 5.7e-35 150.6 86 80.2
TWI60G0164 Tripterygium wilfordii HOM05D005440 ORTHO05D007314 5.7e-35 150.6 86 82.6
Actinidia12520 Actinidia chinensis HOM05D005440 ORTHO05D007314 7.4e-35 150.2 86 82.6
Cpa.g.sc8.301 Carica papaya HOM05D005440 ORTHO05D007314 7.4e-35 150.2 86 81.4
CiPaw.04G136100 Carya illinoinensis HOM05D005440 ORTHO05D007314 7.4e-35 150.2 86 77.9
Sabra16G0025200 Salix brachista HOM05D005440 ORTHO05D007314 7.4e-35 150.2 87 79.3
GSVIVG01026115001 Vitis vinifera HOM05D005440 ORTHO05D007314 7.4e-35 150.2 86 81.4
Gohir.A07G081000 Gossypium hirsutum HOM05D005440 ORTHO05D007314 9.7e-35 149.8 86 81.4
Gohir.D07G086600 Gossypium hirsutum HOM05D005440 ORTHO05D007314 9.7e-35 149.8 86 81.4
Gorai.001G092600 Gossypium raimondii HOM05D005440 ORTHO05D007314 9.7e-35 149.8 86 81.4
CSS0043590 Camellia sinensis var. sinensis HOM05D005440 ORTHO05D007314 1.3e-34 149.4 87 81.6
Glyma.20G065600 Glycine max HOM05D005440 ORTHO05D007314 1.3e-34 149.4 86 80.2
Lj6g0026846 Lotus japonicus HOM05D005440 ORTHO05D007314 1.3e-34 149.4 86 79.1
Zm00001eb292540 Zea mays HOM05D005440 ORTHO05D007314 1.3e-34 149.4 86 77.9
ATR0763G213 Amborella trichopoda HOM05D005440 ORTHO05D007314 1.7e-34 149.1 86 80.2
AL4G27520 Arabidopsis lyrata HOM05D005440 ORTHO05D007314 1.7e-34 149.1 87 82.8
MSTRG.15262 Avicennia marina HOM05D005440 ORTHO05D007314 1.7e-34 149.1 86 77.9
DCAR_019996 Daucus carota HOM05D005440 ORTHO05D007314 2.2e-34 148.7 87 80.5
MBI18_g10015_MAGBIO Magnolia biondii HOM05D005440 ORTHO05D007314 2.2e-34 148.7 86 80.2
Sp4g14550 Schrenkiella parvula HOM05D005440 ORTHO05D007314 2.2e-34 148.7 87 80.5
Duzib138G1709 Durio zibethinus HOM05D005440 ORTHO05D007314 2.8e-34 148.3 86 80.2
Aqoxy1G01485 Aquilegia oxysepala HOM05D005440 ORTHO05D007314 3.7e-34 147.9 87 79.3
Thhalv10017571m.g Eutrema salsugineum HOM05D005440 ORTHO05D007314 3.7e-34 147.9 87 81.6
Rhsim12G0014000 Rhododendron simsii HOM05D005440 ORTHO05D007314 4.8e-34 147.5 86 80.2
vmacro08748 Vaccinium macrocarpon HOM05D005440 ORTHO05D007314 4.8e-34 147.5 86 80.2
Oeu053137.1 Olea europaea HOM05D005440 ORTHO05D007314 6.3e-34 147.1 87 78.2
AT2G32170 Arabidopsis thaliana HOM05D005440 ORTHO05D007314 8.2e-34 146.7 87 81.6
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 8.2e-34 146.7 86 79.1
THA.LOC104826162 Tarenaya hassleriana HOM05D005440 ORTHO05D007314 8.2e-34 146.7 87 80.5
TAR627G1033 Trochodendron aralioides HOM05D005440 ORTHO05D007314 8.2e-34 146.7 86 81.4
CARHR125950 Cardamine hirsuta HOM05D005440 ORTHO05D007314 1.1e-33 146.4 86 77.9
Nn5g27478 Nelumbo nucifera HOM05D005440 ORTHO05D007314 1.4e-33 146.0 86 76.7
SEGI_34757 Sequoiadendron giganteum HOM05D005440 ORTHO05D007314 1.4e-33 146.0 86 77.9
Carub.0004s1349 Capsella rubella HOM05D005440 ORTHO05D007314 1.8e-33 145.6 87 80.5
CARHR125970 Cardamine hirsuta HOM05D005440 ORTHO05D007314 2.4e-33 145.2 87 80.5
Duzib133G0846 Durio zibethinus HOM05D005440 ORTHO05D007314 2.4e-33 145.2 86 79.1
BcaB06g28584 Brassica carinata HOM05D005440 ORTHO05D007314 4.1e-33 144.4 87 79.3
BcaC02g07946 Brassica carinata HOM05D005440 ORTHO05D007314 4.1e-33 144.4 87 79.3
C04p61670 Brassica napus HOM05D005440 ORTHO05D007314 4.1e-33 144.4 87 79.3
BolC4t27650H Brassica oleracea HOM05D005440 ORTHO05D007314 4.1e-33 144.4 87 79.3
arahy.Tifrunner.gnm1.ann1.Z94T11 Arachis hypogaea HOM05D005440 ORTHO05D007314 5.3e-33 144.1 81 82.7
A04p24740 Brassica napus HOM05D005440 ORTHO05D007314 5.3e-33 144.1 87 78.2
Eucgr.K01335 Eucalyptus grandis HOM05D005440 ORTHO05D007314 1.2e-32 142.9 86 80.2
Mapoly0014s0077 Marchantia polymorpha HOM05D005440 ORTHO05D007314 1.2e-32 142.9 86 76.7
CDE06G0633 Ceratophyllum demersum HOM05D005440 ORTHO05D007314 2.6e-32 141.7 87 79.3
Pp3c17_14810 Physcomitrium patens HOM05D005440 ORTHO05D007314 3.5e-32 141.4 88 75.0
THA.LOC104800970 Tarenaya hassleriana HOM05D005440 ORTHO05D007314 1.3e-31 139.4 87 78.2
Nitab4.5_0000496g0020 Nicotiana tabacum HOM05D005440 ORTHO05D007314 8.5e-31 136.7 92 75.0
SMO358G0560 Selaginella moellendorffii HOM05D005440 ORTHO05D007314 1.1e-30 136.3 86 72.1
BraA04t17992Z Brassica rapa HOM05D005440 ORTHO05D007314 1.5e-30 136.0 103 65.0
Carub.0004s1348 Capsella rubella HOM05D005440 ORTHO05D007314 1.9e-30 135.6 87 74.7
AagrBONN_evm.TU.Sc2ySwM_368.3314 Anthoceros agrestis HOM05D005440 ORTHO05D007314 9.4e-30 133.3 86 72.1
AT2G32160 Arabidopsis thaliana HOM05D005440 ORTHO05D007314 4.7e-29 131.0 87 73.6
TWI60G0012 Tripterygium wilfordii HOM05D005440 ORTHO05D007314 2.3e-28 128.6 85 71.8
Pp3c1_31970 Physcomitrium patens HOM05D005440 ORTHO05D007314 4.0e-28 127.9 88 67.0
CBR_g29536 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-27 126.3 87 67.8
DCAR_009586 Daucus carota HOM05D005440 ORTHO05D007314 3.7e-26 121.3 72 79.2
Lj4C830T18 Lonicera japonica HOM05D005440 ORTHO05D007314 8.3e-26 120.2 72 77.8
unitig_32.g10657 Utricularia gibba HOM05D005440 ORTHO05D007314 2.4e-25 118.6 72 75.0
FAN05G0095 Fragaria x ananassa HOM05D005440 ORTHO05D007314 1.3e-23 112.8 62 83.9
Sabra16G0027100 Salix brachista HOM05D005440 ORTHO05D007314 1.7e-23 112.5 71 74.6
ClCG11G016720 Citrullus lanatus HOM05D005440 ORTHO05D007314 2.5e-22 108.6 95 57.9
PRCOL_00002828 Prasinoderma coloniale HOM05D005440 ORTHO05D007314 5.7e-19 97.4 105 47.6
Sabra06G0017100 Salix brachista HOM05D005440 ORTHO05D007314 9.8e-19 96.7 96 55.2
Cre03.g188950 Chlamydomonas reinhardtii HOM05D005440 ORTHO05D007314 1.1e-17 93.2 87 51.7
MCO05G304 Micromonas commoda HOM05D005440 ORTHO05D007314 5.4e-17 90.9 89 48.3
Cfa026418 Carpinus fangiana HOM05D005440 ORTHO05D007314 1.3e-15 86.3 87 44.8
Lsat_1_v5_gn_5_68301 Lactuca sativa HOM05D005440 ORTHO05D007314 8.6e-15 83.6 51 72.5
Atru.ctg1434.11 Acer truncatum HOM05D005440 ORTHO05D007314 1.1e-14 83.2 83 49.4
Nitab4.5_0002704g0030 Nicotiana tabacum HOM05D005440 ORTHO05D007314 1.0e-12 76.6 97 49.5
FAN09G4325 Fragaria x ananassa HOM05D005440 ORTHO05D007314 1.8e-12 75.9 43 79.1
Aa31LG5G4880 Aethionema arabicum HOM05D005440 ORTHO05D007314 3.4e-11 71.6 50 70.0
Aqoxy1G03388 Aquilegia oxysepala HOM05D005440 ORTHO05D007314 2.0e-08 62.4 36 75.0


User provided reference genes

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