Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund08020 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.0e-44 183.0 88 100.0
ClCG00G003160 Citrullus lanatus HOM05D002824 ORTHO05D007162 1.7e-15 85.9 78 57.7
CAN.G1595.2 Capsicum annuum HOM05D002824 ORTHO05D007162 1.4e-14 82.8 78 57.7
Solyc00g500031.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 1.4e-14 82.8 78 57.7
Solyc00g500076.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 1.4e-14 82.8 78 57.7
DCAR_032521 Daucus carota HOM05D002824 ORTHO05D007162 1.9e-14 82.4 78 56.4
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 2.5e-14 82.0 78 56.4
HanXRQChr00c0394g0574541 Helianthus annuus HOM05D002824 ORTHO05D007162 4.2e-14 81.3 78 55.1
HanXRQChr00c0925g0577901 Helianthus annuus HOM05D002824 ORTHO05D007162 4.2e-14 81.3 78 55.1
HanXRQChr01g0020211 Helianthus annuus HOM05D002824 ORTHO05D007162 4.2e-14 81.3 78 55.1
HanXRQChr10g0284391 Helianthus annuus HOM05D002824 ORTHO05D007162 4.2e-14 81.3 78 55.1
HanXRQChr10g0318051 Helianthus annuus HOM05D002824 ORTHO05D007162 4.2e-14 81.3 78 55.1
HanXRQChr11g0326971 Helianthus annuus HOM05D002824 ORTHO05D007162 4.2e-14 81.3 78 55.1
HanXRQChr12g0369861 Helianthus annuus HOM05D002824 ORTHO05D007162 4.2e-14 81.3 78 55.1
HanXRQCPg0580191 Helianthus annuus HOM05D002824 ORTHO05D007162 4.2e-14 81.3 78 55.1
PGR111G0083 Punica granatum HOM05D002824 ORTHO05D007162 5.5e-14 80.9 78 55.1
Cpa.g.sc0.196 Carica papaya HOM05D002824 ORTHO05D007162 7.2e-14 80.5 78 56.4
CAN.G327.20 Capsicum annuum HOM05D002824 ORTHO05D007162 1.2e-13 79.7 78 56.4
HanXRQChr17g0554561 Helianthus annuus HOM05D002824 ORTHO05D007162 1.2e-13 79.7 78 55.1
Eucgr.E03558 Eucalyptus grandis HOM05D002824 ORTHO05D007162 2.1e-13 79.0 78 53.8
Gohir.1Z050134 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.1e-13 79.0 76 55.3
Gohir.A12G024800 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.1e-13 79.0 76 55.3
Gorai.003G111500 Gossypium raimondii HOM05D002824 ORTHO05D007162 2.1e-13 79.0 76 55.3
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-13 78.2 80 56.2
RcHm_v2.0_CPg0501871 Rosa chinensis HOM05D002824 ORTHO05D007162 4.6e-13 77.8 76 55.3
Gohir.A05G396400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 6.1e-13 77.4 76 53.9
Nitab4.5_0011882g0040 Nicotiana tabacum HOM05D002824 ORTHO05D007162 7.9e-13 77.0 76 55.3
Gohir.D01G102138 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.0e-12 76.6 76 53.9
HanXRQChr11g0345281 Helianthus annuus HOM05D002824 ORTHO05D007162 1.8e-12 75.9 78 52.6
Gohir.A06G056900 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.3e-12 75.5 76 53.9
Gohir.D11G307000 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.9e-12 74.7 76 52.6
Gohir.D03G105400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 5.1e-12 74.3 76 52.6
Migut.D01328 Erythranthe guttata HOM05D002824 ORTHO05D007162 1.1e-11 73.2 78 51.3
Gorai.005G065900 Gossypium raimondii HOM05D002824 ORTHO05D007162 1.1e-11 73.2 76 53.9
Nn021s41522 Nelumbo nucifera HOM05D002824 ORTHO05D007162 1.5e-11 72.8 78 52.6
TAR375G0295 Trochodendron aralioides HOM05D002824 ORTHO05D007162 2.0e-11 72.4 78 52.6
Medtr4g059910 Medicago truncatula HOM05D002824 ORTHO05D007162 4.3e-11 71.2 75 53.3
AL2G20560 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 5.7e-11 70.9 76 53.9
AL2G21720 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 5.7e-11 70.9 76 53.9
Medtr4g034810 Medicago truncatula HOM05D002824 ORTHO05D007162 5.7e-11 70.9 74 54.1
PSO548G0051 Papaver somniferum HOM05D002824 ORTHO05D007162 5.7e-11 70.9 78 52.6
ATCG00770 Arabidopsis thaliana HOM05D002824 ORTHO05D007162 7.4e-11 70.5 76 53.9
BNapus_Darmor_BZH_scaffold_253p00350 Brassica napus HOM05D002824 ORTHO05D007162 7.4e-11 70.5 76 53.9
CARHR282250 Cardamine hirsuta HOM05D002824 ORTHO05D007162 7.4e-11 70.5 76 53.9
BNapus_Darmor_BZH_scaffold_287p00270 Brassica napus HOM05D002824 ORTHO05D007162 1.3e-10 69.7 76 51.3
BolSC29t60529H Brassica oleracea HOM05D002824 ORTHO05D007162 2.2e-10 68.9 76 52.6
BolSC29t60610H Brassica oleracea HOM05D002824 ORTHO05D007162 2.2e-10 68.9 76 52.6
BolSC35t60729H Brassica oleracea HOM05D002824 ORTHO05D007162 2.2e-10 68.9 76 52.6
BraA06t25384Z Brassica rapa HOM05D002824 ORTHO05D007162 2.2e-10 68.9 76 52.6
BraSC103t45445Z Brassica rapa HOM05D002824 ORTHO05D007162 2.2e-10 68.9 76 52.6
BraSC138t45553Z Brassica rapa HOM05D002824 ORTHO05D007162 2.2e-10 68.9 76 52.6
BraSC58t46441Z Brassica rapa HOM05D002824 ORTHO05D007162 2.2e-10 68.9 76 52.6
BolC9t57548H Brassica oleracea HOM05D002824 ORTHO05D007162 2.8e-10 68.6 76 52.6
LjContig00318g0002732 Lotus japonicus HOM05D002824 ORTHO05D007162 3.7e-10 68.2 74 51.4
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 3.7e-10 68.2 74 51.4
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 3.7e-10 68.2 74 51.4
Lalb_Chr03g0039321 Lupinus albus HOM05D002824 ORTHO05D007162 1.8e-09 65.9 74 50.0
Lalb_Chr25g0283371 Lupinus albus HOM05D002824 ORTHO05D007162 1.8e-09 65.9 74 50.0
C02p60170 Brassica napus HOM05D002824 ORTHO05D007162 2.4e-09 65.5 76 51.3
Gohir.A12G228400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.2e-08 63.2 61 52.5
EL10As15g24111 Beta vulgaris HOM05D002824 ORTHO05D007162 1.0e-07 60.1 35 74.3
BolC7t41708H Brassica oleracea HOM05D002824 ORTHO05D007162 3.8e-07 58.2 67 53.7
Lalb_Chr23g0274241 Lupinus albus HOM05D002824 ORTHO05D007162 5.0e-07 57.8 73 45.2
Hund30069 Selenicereus undatus HOM05D002824 ORTHO05D008771 5.0e-07 57.8 36 75.0
GSVIVG01014320001 Vitis vinifera HOM05D002824 ORTHO05D007162 8.5e-07 57.0 68 48.5


User provided reference genes

Program Settings