Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07929 Selenicereus undatus HOM05D001108 ORTHO05D005418 5.8e-158 560.8 283 100.0
EL10Ac9g20764 Beta vulgaris HOM05D001108 ORTHO05D005418 5.3e-111 404.8 278 74.5
EL10Ac4g08320 Beta vulgaris HOM05D001108 ORTHO05D005418 3.2e-108 395.6 275 71.6
Ah.01g015170 Amaranthus hybridus HOM05D001108 ORTHO05D005418 4.2e-108 395.2 284 73.2
AUR62019549 Chenopodium quinoa HOM05D001108 ORTHO05D005418 7.2e-108 394.4 256 75.8
AUR62036092 Chenopodium quinoa HOM05D001108 ORTHO05D005418 2.3e-106 389.4 277 72.2
Sc21g0002830 Simmondsia chinensis HOM05D001108 ORTHO05D005418 1.2e-105 387.1 280 72.9
Prupe.3G137500 Prunus persica HOM05D001108 ORTHO05D005418 7.5e-105 384.4 276 69.9
MD09G1247800 Malus domestica HOM05D001108 ORTHO05D005418 9.1e-103 377.5 254 73.6
TAR627G0387 Trochodendron aralioides HOM05D001108 ORTHO05D005418 2.7e-102 375.9 276 71.7
QL08p038694 Quercus lobata HOM05D001108 ORTHO05D005418 8.5e-101 370.9 259 72.6
Haze_21052 Corylus avellana HOM05D001108 ORTHO05D001619 1.6e-99 366.7 258 70.9
MD17G1240700 Malus domestica HOM05D001108 ORTHO05D005418 1.8e-98 363.2 253 71.1
Nn1g04079 Nelumbo nucifera HOM05D001108 ORTHO05D005418 1.8e-98 363.2 261 73.2
Ciclev10013903m.g Citrus clementina HOM05D001108 ORTHO05D005418 6.8e-98 361.3 280 67.1
CiPaw.04G125800 Carya illinoinensis HOM05D001108 ORTHO05D005418 2.6e-97 359.4 270 68.1
CSS0042510 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 4.4e-97 358.6 268 68.3
CSS0002926 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 5.7e-97 358.2 268 68.3
vmacro12300 Vaccinium macrocarpon HOM05D001108 ORTHO05D005418 5.7e-97 358.2 274 66.4
PSO478G1555 Papaver somniferum HOM05D001108 ORTHO05D005418 4.8e-96 355.1 262 69.8
PSO782G4551 Papaver somniferum HOM05D001108 ORTHO05D005418 1.4e-95 353.6 262 69.5
Solyc07g054190.4 Solanum lycopersicum HOM05D001108 ORTHO05D005418 1.4e-95 353.6 268 70.1
RcHm_v2.0_Chr7g0232111 Rosa chinensis HOM05D001108 ORTHO05D005418 1.8e-95 353.2 258 69.4
TWI75G0959 Tripterygium wilfordii HOM05D001108 ORTHO05D005418 4.1e-95 352.1 252 71.8
COL.COLO4_33977 Corchorus olitorius HOM05D001108 ORTHO05D005418 5.4e-95 351.7 250 74.0
HanXRQChr06g0171321 Helianthus annuus HOM05D001108 ORTHO05D005418 1.2e-94 350.5 248 71.8
Sopen07g028120 Solanum pennellii HOM05D001108 ORTHO05D005418 1.2e-94 350.5 268 69.8
Gohir.A09G128300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 2.0e-94 349.7 251 71.3
PSO541G4613 Papaver somniferum HOM05D001108 ORTHO05D005418 2.0e-94 349.7 280 65.7
PSO675G3815 Papaver somniferum HOM05D001108 ORTHO05D005418 2.0e-94 349.7 281 65.1
CSS0044059 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 2.7e-94 349.4 260 68.8
Atru.chr6.2997 Acer truncatum HOM05D001108 ORTHO05D005418 3.5e-94 349.0 266 69.9
CSS0039738 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 7.7e-94 347.8 242 71.5
CANSAT80G2367 Cannabis sativa HOM05D001108 ORTHO05D005418 7.7e-94 347.8 281 66.5
Nitab4.5_0000512g0050 Nicotiana tabacum HOM05D001108 ORTHO05D005418 1.3e-93 347.1 232 75.0
Lsat_1_v5_gn_3_37280 Lactuca sativa HOM05D001108 ORTHO05D005418 2.9e-93 345.9 258 70.2
Lalb_Chr03g0029441 Lupinus albus HOM05D001108 ORTHO05D005418 2.9e-93 345.9 278 65.8
Thecc.05G172000 Theobroma cacao HOM05D001108 ORTHO05D005418 2.9e-93 345.9 280 65.4
CsaV3_6G013000 Cucumis sativus L. HOM05D001108 ORTHO05D005418 3.8e-93 345.5 270 67.0
Migut.C01348 Erythranthe guttata HOM05D001108 ORTHO05D005418 3.8e-93 345.5 270 68.9
AUR62002952 Chenopodium quinoa HOM05D001108 ORTHO05D005418 6.5e-93 344.7 234 76.1
Nitab4.5_0004071g0020 Nicotiana tabacum HOM05D001108 ORTHO05D005418 8.6e-93 344.4 232 74.1
CAN.G248.33 Capsicum annuum HOM05D001108 ORTHO05D005418 1.1e-92 344.0 273 66.7
ClCG02G017630 Citrullus lanatus HOM05D001108 ORTHO05D005418 1.9e-92 343.2 271 66.4
Gohir.D09G124300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 1.9e-92 343.2 245 71.0
Lj3g0011439 Lotus japonicus HOM05D001108 ORTHO05D005418 3.3e-92 342.4 268 69.0
CsaV3_6G012940 Cucumis sativus L. HOM05D001108 ORTHO05D005418 1.2e-91 340.5 270 65.9
Gorai.006G143100 Gossypium raimondii HOM05D001108 ORTHO05D005418 1.2e-91 340.5 245 70.6
FAN04G2154 Fragaria x ananassa HOM05D001108 ORTHO05D005418 2.8e-91 339.3 274 65.3
HanXRQChr06g0171311 Helianthus annuus HOM05D001108 ORTHO05D005418 2.8e-91 339.3 245 69.8
Sed0006413 Sechium edule HOM05D001108 ORTHO05D005418 3.6e-91 339.0 265 66.0
Duzib093G1006 Durio zibethinus HOM05D001108 ORTHO05D005418 4.7e-91 338.6 233 73.8
Ca_20056_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 6.1e-91 338.2 257 67.7
Rhsim06G0142500 Rhododendron simsii HOM05D001108 ORTHO05D005418 6.1e-91 338.2 276 64.9
Manes.13G146800 Manihot esculenta HOM05D001108 ORTHO05D005418 3.0e-90 335.9 242 71.5
VMungo1127G1775 Vigna mungo HOM05D001108 ORTHO05D005418 4.0e-90 335.5 275 64.4
Cpa.g.sc34.160 Carica papaya HOM05D001108 ORTHO05D005418 5.2e-90 335.1 271 66.4
Lsat_1_v5_gn_4_70021 Lactuca sativa HOM05D001108 ORTHO05D005418 5.2e-90 335.1 233 70.8
Peaxi162Scf00132g00233 Petunia axillaris HOM05D001229 ORTHO05D005418 5.2e-90 335.1 225 74.2
SalBow1G0161 Salvia bowleyana HOM05D001108 ORTHO05D005418 2.0e-89 333.2 232 73.7
FvH4_5g33380 Fragaria vesca HOM05D001108 ORTHO05D005418 2.6e-89 332.8 244 70.1
FAN18G0425 Fragaria x ananassa HOM05D001108 ORTHO05D005418 3.4e-89 332.4 244 70.1
CAN.G248.11 Capsicum annuum HOM05D001108 ORTHO05D005418 7.5e-89 331.3 207 77.3
unitig_60.g25406 Utricularia gibba HOM05D001108 ORTHO05D005418 7.5e-89 331.3 256 65.2
Phvul.011G114100 Phaseolus vulgaris HOM05D001108 ORTHO05D005418 9.8e-89 330.9 241 70.1
MSTRG.5628 Avicennia marina HOM05D001108 ORTHO05D005418 1.3e-88 330.5 232 72.4
Haze_13157 Corylus avellana HOM05D001108 ORTHO05D005418 6.3e-88 328.2 199 79.9
Nn1g06569 Nelumbo nucifera HOM05D001108 ORTHO05D005418 1.8e-87 326.6 241 68.9
CARHR111330 Cardamine hirsuta HOM05D001108 ORTHO05D005418 3.1e-87 325.9 237 71.7
Medtr0004s0220 Medicago truncatula HOM05D001108 ORTHO05D005418 3.1e-87 325.9 244 69.7
Medtr1g066930 Medicago truncatula HOM05D001108 ORTHO05D005418 3.1e-87 325.9 234 70.5
Potri.019G100500 Populus trichocarpa HOM05D001108 ORTHO05D005418 4.1e-87 325.5 237 71.3
Ah.04g164360 Amaranthus hybridus HOM05D001108 ORTHO05D005418 5.4e-87 325.1 263 66.2
AUR62007757 Chenopodium quinoa HOM05D001108 ORTHO05D005418 5.4e-87 325.1 226 73.9
AT2G20690 Arabidopsis thaliana HOM05D001108 ORTHO05D005418 7.0e-87 324.7 262 66.4
Eucgr.K01017 Eucalyptus grandis HOM05D001108 ORTHO05D005418 7.0e-87 324.7 218 74.8
PGSC0003DMG400018350 Solanum tuberosum HOM05D001108 ORTHO05D005418 2.0e-86 323.2 199 79.9
Glyma.12G112900 Glycine max HOM05D001108 ORTHO05D005418 2.7e-86 322.8 206 77.7
Cfa017142 Carpinus fangiana HOM05D001108 ORTHO05D005418 3.5e-86 322.4 199 78.4
Cc05_g07130 Coffea canephora HOM05D001108 ORTHO05D005418 3.5e-86 322.4 199 78.4
PGR142G4253 Punica granatum HOM05D001108 ORTHO05D005418 3.5e-86 322.4 265 66.0
Sabra19G0110800 Salix brachista HOM05D001108 ORTHO05D005418 3.5e-86 322.4 237 70.9
Sabra19G0112200 Salix brachista HOM05D001108 ORTHO05D005418 3.5e-86 322.4 237 70.9
AL3G53780 Arabidopsis lyrata HOM05D001108 ORTHO05D005418 4.5e-86 322.0 240 71.2
BcaB03g16863 Brassica carinata HOM05D001108 ORTHO05D005418 1.7e-85 320.1 209 77.0
C07p00210 Brassica napus HOM05D001108 ORTHO05D005418 5.0e-85 318.5 214 76.2
BcaC06g36761 Brassica carinata HOM05D001108 ORTHO05D005418 6.6e-85 318.2 215 75.8
BolC7t40471H Brassica oleracea HOM05D001108 ORTHO05D005418 6.6e-85 318.2 215 75.8
Carub.0003s3520 Capsella rubella HOM05D001108 ORTHO05D005418 8.6e-85 317.8 236 71.6
MELO3C000760.2 Cucumis melo HOM05D001108 ORTHO05D005418 8.6e-85 317.8 233 68.7
Thhalv10002078m.g Eutrema salsugineum HOM05D001108 ORTHO05D005418 1.2e-83 313.9 212 74.5
THA.LOC104824701 Tarenaya hassleriana HOM05D001108 ORTHO05D005418 1.6e-83 313.5 204 77.9
A07p00070 Brassica napus HOM05D001108 ORTHO05D005418 3.6e-83 312.4 218 74.8
Aqoxy1G02437 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 6.1e-83 311.6 272 60.7
ECA246G0340 Erigeron canadensis HOM05D001108 ORTHO05D005418 1.8e-82 310.1 200 76.0
HPP92_003131 Vanilla planifolia HOM05D001108 ORTHO05D005418 1.8e-82 310.1 207 72.0
BraA07t27798Z Brassica rapa HOM05D001108 ORTHO05D005418 2.3e-82 309.7 218 74.3
Potri.013G131800 Populus trichocarpa HOM05D001108 ORTHO05D005418 2.3e-82 309.7 273 63.4
SEGI_26411 Sequoiadendron giganteum HOM05D001108 ORTHO05D005418 3.0e-82 309.3 233 69.1
SGA_v2.0_scaffold92G28314 Striga asiatica HOM05D001108 ORTHO05D005418 3.0e-82 309.3 238 67.2
DCAR_013007 Daucus carota HOM05D001108 ORTHO05D005418 5.2e-82 308.5 200 76.5
Aqoxy1G02436 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 6.8e-82 308.1 182 84.1
arahy.Tifrunner.gnm1.ann1.SGC5R3 Arachis hypogaea HOM05D001108 ORTHO05D005418 1.2e-81 307.4 262 64.9
Sp3g33940 Schrenkiella parvula HOM05D001108 ORTHO05D005418 3.4e-81 305.8 193 78.8
Cpa.g.sc34.159 Carica papaya HOM05D001108 ORTHO05D005418 7.5e-81 304.7 271 58.7
arahy.Tifrunner.gnm1.ann1.85LIYI Arachis hypogaea HOM05D001108 ORTHO05D005418 1.7e-80 303.5 268 63.4
arahy.Tifrunner.gnm1.ann1.PPEG78 Arachis hypogaea HOM05D001108 ORTHO05D005418 8.3e-80 301.2 265 63.8
Sabra13G0111300 Salix brachista HOM05D001108 ORTHO05D005418 8.3e-80 301.2 254 63.8
CDE02G0464 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 1.4e-79 300.4 197 74.1
arahy.Tifrunner.gnm1.ann1.S0UG05 Arachis hypogaea HOM05D001108 ORTHO05D005418 3.2e-79 299.3 250 66.0
Mapoly0026s0114 Marchantia polymorpha HOM05D001108 ORTHO05D005418 2.3e-77 293.1 214 69.6
Dinv26419 Davidia involucrata HOM05D001108 ORTHO05D005418 3.0e-77 292.7 177 77.4
AagrBONN_evm.TU.Sc2ySwM_228.5414 Anthoceros agrestis HOM05D001108 ORTHO05D005418 8.6e-77 291.2 200 73.0
Pp3c2_19260 Physcomitrium patens HOM05D001108 ORTHO05D005418 2.1e-75 286.6 198 73.7
Lj1P722T15 Lonicera japonica HOM05D001108 ORTHO05D005418 2.8e-75 286.2 183 77.6
Dinv23643 Davidia involucrata HOM05D001108 ORTHO05D005418 4.7e-75 285.4 177 76.8
SMO137G0361 Selaginella moellendorffii HOM05D001108 ORTHO05D005418 4.0e-74 282.3 198 69.7
CBR_g36747 Chara braunii HOM05D001108 ORTHO05D005418 5.2e-74 282.0 226 65.9
ATR1096G056 Amborella trichopoda HOM05D001108 ORTHO05D005418 4.9e-72 275.4 266 57.5
Duzib128G0360 Durio zibethinus HOM05D001108 ORTHO05D005418 6.4e-72 275.0 221 65.6
CDE09G0563 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 1.9e-71 273.5 179 73.7
Actinidia11036 Actinidia chinensis HOM05D001108 ORTHO05D005418 8.9e-66 254.6 184 69.6
Zm00001eb410410 Zea mays HOM05D001108 ORTHO05D005418 8.3e-64 248.1 230 57.4
Zm00001eb410210 Zea mays HOM05D001108 ORTHO05D005418 1.6e-62 243.8 231 55.8
CAN.G248.16 Capsicum annuum HOM05D001108 ORTHO05D005418 7.8e-62 241.5 165 70.9
CAN.G851.1 Capsicum annuum HOM05D001108 ORTHO05D005418 7.8e-62 241.5 165 70.9
BcaC04g22783 Brassica carinata HOM05D001108 ORTHO05D005418 5.1e-61 238.8 171 72.5
Sabra19G0110900 Salix brachista HOM05D001108 ORTHO05D005418 1.1e-60 237.7 240 57.1
HanXRQChr06g0169711 Helianthus annuus HOM05D001108 ORTHO05D005418 3.3e-60 236.1 246 55.7
MD09G1265300 Malus domestica HOM05D001108 ORTHO05D005418 1.1e-58 231.1 183 64.5
Os12g0541000 Oryza sativa ssp. japonica HOM05D001108 ORTHO05D005418 6.8e-58 228.4 230 53.0
Psat4g001880 Pisum sativum HOM05D001108 ORTHO05D005418 1.2e-57 227.6 258 53.1
C09p15330 Brassica napus HOM05D001108 ORTHO05D005418 5.1e-53 212.2 192 60.9
CANSAT80G2295 Cannabis sativa HOM05D001108 ORTHO05D005418 3.1e-50 203.0 130 76.2
unitig_88.g27586 Utricularia gibba HOM05D001108 ORTHO05D005418 2.7e-46 189.9 115 79.1
Lsat_1_v5_gn_4_42240 Lactuca sativa HOM05D001108 ORTHO05D005418 7.3e-44 181.8 112 78.6
Pp3s30_1010 Physcomitrium patens HOM05D000723 ORTHO05D004839 1.8e-42 177.2 198 48.5
Cfa026241 Carpinus fangiana HOM05D001108 ORTHO05D005418 5.3e-42 175.6 184 50.5
HanXRQChr06g0169731 Helianthus annuus HOM05D001108 ORTHO05D005418 3.4e-41 172.9 94 88.3
CAN.G362.18 Capsicum annuum HOM05D001108 ORTHO05D005418 3.3e-36 156.4 217 47.0
Cfa014613 Carpinus fangiana HOM05D001108 ORTHO05D005418 5.3e-34 149.1 201 44.8
FAN08G2132 Fragaria x ananassa HOM05D001108 ORTHO05D005418 2.0e-33 147.1 88 80.7
MCO11G757 Micromonas commoda HOM05D001108 ORTHO05D005418 8.2e-27 125.2 209 39.7
PRCOL_00001102 Prasinoderma coloniale HOM05D001108 ORTHO05D005418 5.3e-26 122.5 206 37.4
unitig_88.g27587 Utricularia gibba HOM05D001108 ORTHO05D005418 6.9e-26 122.1 121 51.2
Psat5g098840 Pisum sativum HOM05D001108 ORTHO05D005418 1.3e-24 117.9 126 52.4
Cre06.g296600 Chlamydomonas reinhardtii HOM05D001108 ORTHO05D005418 3.8e-24 116.3 211 35.5
CAN.G248.14 Capsicum annuum HOM05D001108 ORTHO05D005418 2.1e-22 110.5 70 75.7
Ca_28725_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 6.7e-21 105.5 205 33.7
Psat5g097760 Pisum sativum HOM05D002292 ORTHO05D005418 1.3e-19 101.3 117 48.7
AagrBONN_evm.TU.Sc2ySwM_228.459 Anthoceros agrestis HOM05D001108 ORTHO05D005418 2.4e-18 97.1 201 34.8
Medtr4g063470 Medicago truncatula HOM05D001108 ORTHO05D005418 5.5e-15 85.9 66 63.6
Lsat_1_v5_gn_8_150060 Lactuca sativa HOM05D001108 ORTHO05D005418 3.9e-13 79.7 65 58.5
RcHm_v2.0_Chr2g0153941 Rosa chinensis HOM05D001108 ORTHO05D005418 5.1e-13 79.3 113 45.1
MBI06_g06479_MAGBIO Magnolia biondii HOM05D001108 ORTHO05D005418 2.0e-09 67.4 67 61.2
BolC9t54441H Brassica oleracea HOM05D001108 ORTHO05D005418 4.5e-09 66.2 38 81.6
Psat0s773g0040 Pisum sativum HOM05D001108 ORTHO05D005418 3.8e-08 63.2 152 33.6
C09p34920 Brassica napus HOM05D001108 ORTHO05D005418 6.5e-08 62.4 54 59.3
BolC9t56339H Brassica oleracea HOM05D001108 ORTHO05D005418 6.5e-08 62.4 54 59.3
C09p34930 Brassica napus HOM05D001108 ORTHO05D005418 1.9e-07 60.8 50 62.0
CAN.G10322.1 Capsicum annuum HOM05D001108 ORTHO05D115629 2.7e-06 57.0 45 62.2


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