Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07892 Selenicereus undatus HOM05D006798 ORTHO05D002893 1.8e-90 335.9 170 100.0
Hund00977 Selenicereus undatus HOM05D006798 ORTHO05D380425 1.4e-26 123.6 66 89.4
Hund20109 Selenicereus undatus HOM05D006798 ORTHO05D381244 1.2e-25 120.6 71 84.5
Hund10110 Selenicereus undatus HOM05D006798 ORTHO05D009656 2.7e-25 119.4 71 83.1
Hund20107 Selenicereus undatus HOM05D006798 ORTHO05D382641 6.0e-25 118.2 66 84.8
Hund24516 Selenicereus undatus HOM05D006798 ORTHO05D382219 7.8e-25 117.9 68 83.8
Hund04104 Selenicereus undatus HOM05D006798 ORTHO05D009656 1.3e-24 117.1 66 84.8
Hund26555 Selenicereus undatus HOM05D006798 ORTHO05D009656 1.1e-23 114.0 67 79.1
Hund01073 Selenicereus undatus HOM05D006798 ORTHO05D009656 7.3e-23 111.3 85 69.4
Hund09936 Selenicereus undatus HOM05D006798 ORTHO05D382170 8.1e-22 107.8 71 74.6
Hund31255 Selenicereus undatus HOM05D006798 ORTHO05D009656 1.4e-21 107.1 71 78.9
Hund05540 Selenicereus undatus HOM05D006798 ORTHO05D383457 4.0e-21 105.5 71 77.5
Hund18111 Selenicereus undatus HOM05D006798 ORTHO05D381900 6.9e-21 104.8 73 74.0
Hund04358 Selenicereus undatus HOM05D006798 ORTHO05D009656 9.9e-20 100.9 71 73.2
Hund10953 Selenicereus undatus HOM05D006798 ORTHO05D382421 3.8e-19 99.0 64 76.6
Hund26297 Selenicereus undatus HOM05D006798 ORTHO05D382679 1.6e-17 93.6 57 82.5
Hund22441 Selenicereus undatus HOM05D006798 ORTHO05D382130 4.6e-17 92.0 70 71.4
Hund23902 Selenicereus undatus HOM05D006798 ORTHO05D382754 6.0e-17 91.7 64 76.6
Hund03486 Selenicereus undatus HOM05D006798 ORTHO05D009656 1.5e-15 87.0 55 80.0
Hund04484 Selenicereus undatus HOM05D006798 ORTHO05D382362 4.8e-14 82.0 55 76.4
Hund24780 Selenicereus undatus HOM05D006798 ORTHO05D009656 8.1e-14 81.3 39 94.9
Hund27954 Selenicereus undatus HOM05D006798 ORTHO05D009656 9.9e-12 74.3 36 91.7
Hund16120 Selenicereus undatus HOM05D000009 ORTHO05D000008 2.9e-11 72.8 51 70.6
Hund20472 Selenicereus undatus HOM05D006798 ORTHO05D380769 3.8e-11 72.4 66 60.6
Hund08948 Selenicereus undatus HOM05D006798 ORTHO05D009656 1.1e-10 70.9 68 63.2
Hund24572 Selenicereus undatus HOM05D006798 ORTHO05D009656 1.1e-10 70.9 46 78.3
TWI60G0325 Tripterygium wilfordii HOM05D002462 ORTHO05D002893 1.4e-10 70.5 53 71.7
Hund24878 Selenicereus undatus HOM05D006798 ORTHO05D009656 4.2e-10 68.9 32 96.9
Hund07875 Selenicereus undatus HOM05D006798 ORTHO05D380693 5.4e-10 68.6 32 93.8
Hund08949 Selenicereus undatus HOM05D006798 ORTHO05D009656 5.4e-10 68.6 56 60.7
Hund10265 Selenicereus undatus HOM05D006798 ORTHO05D009656 7.1e-10 68.2 64 59.4
Nitab4.5_0001707g0050 Nicotiana tabacum HOM05D002462 ORTHO05D002893 1.2e-09 67.4 93 52.7
Hund12159 Selenicereus undatus HOM05D006798 ORTHO05D009656 1.2e-09 67.4 34 91.2
Hund21109 Selenicereus undatus HOM05D006798 ORTHO05D009656 1.2e-09 67.4 61 59.0
Hund21112 Selenicereus undatus HOM05D006798 ORTHO05D009656 1.2e-09 67.4 61 59.0
Hund01933 Selenicereus undatus HOM05D006798 ORTHO05D009656 2.1e-09 66.6 33 87.9
Hund06752 Selenicereus undatus HOM05D006798 ORTHO05D379732 2.7e-09 66.2 32 90.6
Hund07489 Selenicereus undatus HOM05D006798 ORTHO05D009656 2.7e-09 66.2 52 65.4
PGR031G0384 Punica granatum HOM05D002462 ORTHO05D002893 3.5e-09 65.9 40 87.5
MBI04_g11449_MAGBIO Magnolia biondii HOM05D002462 ORTHO05D002893 4.6e-09 65.5 51 74.5
Hund00883 Selenicereus undatus HOM05D006798 ORTHO05D009656 1.0e-08 64.3 38 81.6
Hund01046 Selenicereus undatus HOM05D006798 ORTHO05D009656 1.0e-08 64.3 40 75.0
PGSC0003DMG400012485 Solanum tuberosum HOM05D002462 ORTHO05D002893 1.3e-08 63.9 76 55.3
Hund18638 Selenicereus undatus HOM05D006798 ORTHO05D009656 1.8e-08 63.5 34 88.2
PGSC0003DMG400012480 Solanum tuberosum HOM05D002462 ORTHO05D002893 2.3e-08 63.2 94 47.9
Hund06606 Selenicereus undatus HOM05D006798 ORTHO05D009656 3.0e-08 62.8 35 82.9
Hund10303 Selenicereus undatus HOM05D006798 ORTHO05D009656 3.0e-08 62.8 34 85.3
Hund11044 Selenicereus undatus HOM05D006798 ORTHO05D009656 3.0e-08 62.8 34 85.3
Hund12426 Selenicereus undatus HOM05D006798 ORTHO05D009656 3.0e-08 62.8 34 85.3
Hund13376 Selenicereus undatus HOM05D006798 ORTHO05D009656 3.0e-08 62.8 34 85.3
Sabra01G0092300 Salix brachista HOM05D002462 ORTHO05D002893 3.9e-08 62.4 50 66.0
Hund14540 Selenicereus undatus HOM05D006798 ORTHO05D009656 3.9e-08 62.4 34 85.3
Duzib084G0510 Durio zibethinus HOM05D002462 ORTHO05D002893 5.1e-08 62.0 44 75.0
Hund00885 Selenicereus undatus HOM05D006798 ORTHO05D383218 5.1e-08 62.0 32 84.4
Hund17811 Selenicereus undatus HOM05D006798 ORTHO05D009656 5.1e-08 62.0 34 82.4
Hund22163 Selenicereus undatus HOM05D006798 ORTHO05D009656 5.1e-08 62.0 34 82.4
Hund00581 Selenicereus undatus HOM05D006798 ORTHO05D009656 6.7e-08 61.6 32 84.4
Hund22937 Selenicereus undatus HOM05D006798 ORTHO05D009656 6.7e-08 61.6 33 81.8
Glyma.01G211200 Glycine max HOM05D002462 ORTHO05D002893 8.7e-08 61.2 46 71.7
Zm00001eb186100 Zea mays HOM05D002462 ORTHO05D002893 1.1e-07 60.8 55 61.8
Cpa.g.sc29.105 Carica papaya HOM05D002462 ORTHO05D002893 1.5e-07 60.5 44 70.5
COL.COLO4_37230 Corchorus olitorius HOM05D002462 ORTHO05D002893 1.9e-07 60.1 32 90.6
Eucgr.D02024 Eucalyptus grandis HOM05D002462 ORTHO05D002893 2.5e-07 59.7 37 83.8
FAN13G1222 Fragaria x ananassa HOM05D002462 ORTHO05D002893 2.5e-07 59.7 40 75.0
SEGI_18907 Sequoiadendron giganteum HOM05D002462 ORTHO05D002893 2.5e-07 59.7 59 61.0
TAR374G0023 Trochodendron aralioides HOM05D002462 ORTHO05D002893 2.5e-07 59.7 37 83.8
Duzib068G0944 Durio zibethinus HOM05D002462 ORTHO05D002893 3.3e-07 59.3 31 93.5
Glyma.11G030500 Glycine max HOM05D002462 ORTHO05D002893 3.3e-07 59.3 46 69.6
Hund04416 Selenicereus undatus HOM05D006798 ORTHO05D382785 3.3e-07 59.3 39 74.4
Hund04419 Selenicereus undatus HOM05D006798 ORTHO05D382333 3.3e-07 59.3 31 87.1
Hund12451 Selenicereus undatus HOM05D006798 ORTHO05D380265 3.3e-07 59.3 40 70.0
Hund14611 Selenicereus undatus HOM05D002462 ORTHO05D002893 3.3e-07 59.3 34 88.2
Nitab4.5_0004059g0030 Nicotiana tabacum HOM05D002462 ORTHO05D002893 4.3e-07 58.9 92 51.1
Phvul.002G060800 Phaseolus vulgaris HOM05D002462 ORTHO05D002893 4.3e-07 58.9 40 75.0
Lj8A256T45 Lonicera japonica HOM05D002462 ORTHO05D002893 5.6e-07 58.5 40 77.5
SalBow6G5274 Salvia bowleyana HOM05D002462 ORTHO05D002893 7.4e-07 58.2 55 61.8
Sc01g0009300 Simmondsia chinensis HOM05D002462 ORTHO05D002893 7.4e-07 58.2 40 75.0
VMungo1215G1797 Vigna mungo HOM05D002462 ORTHO05D002893 7.4e-07 58.2 40 75.0
CSS0008771 Camellia sinensis var. sinensis HOM05D002462 ORTHO05D002893 9.6e-07 57.8 40 77.5
CSS0022686 Camellia sinensis var. sinensis HOM05D002462 ORTHO05D002893 9.6e-07 57.8 40 77.5
Prupe.5G076500 Prunus persica HOM05D002462 ORTHO05D002893 9.6e-07 57.8 33 84.8
Thecc.03G258100 Theobroma cacao HOM05D002462 ORTHO05D002893 9.6e-07 57.8 31 90.3
TWI81G0229 Tripterygium wilfordii HOM05D002462 ORTHO05D002893 9.6e-07 57.8 39 76.9
Potri.001G119500 Populus trichocarpa HOM05D002462 ORTHO05D002893 1.3e-06 57.4 50 62.0
RcHm_v2.0_Chr7g0202131 Rosa chinensis HOM05D002462 ORTHO05D002893 1.3e-06 57.4 31 87.1
SGA_v2.0_scaffold120G32841 Striga asiatica HOM05D002462 ORTHO05D002893 1.3e-06 57.4 58 53.4
Atru.chr9.1394 Acer truncatum HOM05D002462 ORTHO05D002893 1.6e-06 57.0 40 72.5
Gohir.D09G189700 Gossypium hirsutum HOM05D002462 ORTHO05D002893 1.6e-06 57.0 31 87.1
Gorai.006G212300 Gossypium raimondii HOM05D002462 ORTHO05D002893 1.6e-06 57.0 31 87.1
Os02g0644100 Oryza sativa ssp. japonica HOM05D002462 ORTHO05D002893 1.6e-06 57.0 31 90.3
Hund20081 Selenicereus undatus HOM05D006798 ORTHO05D009656 1.6e-06 57.0 62 54.8
Actinidia14451 Actinidia chinensis HOM05D002462 ORTHO05D002893 2.1e-06 56.6 58 58.6
BcaC04g22747 Brassica carinata HOM05D002462 ORTHO05D002893 2.1e-06 56.6 50 60.0
C09p15710 Brassica napus HOM05D002462 ORTHO05D002893 2.1e-06 56.6 50 60.0
BolC9t54477H Brassica oleracea HOM05D002462 ORTHO05D002893 2.1e-06 56.6 50 60.0
Duzib205G1879 Durio zibethinus HOM05D002462 ORTHO05D002893 2.1e-06 56.6 31 87.1
Manes.02G035100 Manihot esculenta HOM05D002462 ORTHO05D002893 2.1e-06 56.6 40 72.5
Hund27502 Selenicereus undatus HOM05D006798 ORTHO05D009656 2.1e-06 56.6 32 81.2
MSTRG.25540 Avicennia marina HOM05D002462 ORTHO05D002893 2.8e-06 56.2 38 73.7
Aa31LG1G2450 Aethionema arabicum HOM05D002462 ORTHO05D002893 3.7e-06 55.8 44 65.9
FvH4_5g00400 Fragaria vesca HOM05D002462 ORTHO05D002893 3.7e-06 55.8 31 83.9
FAN08G1841 Fragaria x ananassa HOM05D002462 ORTHO05D002893 3.7e-06 55.8 31 83.9
FAN18G0067 Fragaria x ananassa HOM05D002462 ORTHO05D002893 3.7e-06 55.8 31 83.9
Hma1.2p1_0367F.1_g136990 Hydrangea macrophylla HOM05D002462 ORTHO05D002893 3.7e-06 55.8 40 72.5
Hund10547 Selenicereus undatus HOM05D006798 ORTHO05D009656 3.7e-06 55.8 40 70.0
Ah.02g117010 Amaranthus hybridus HOM05D002462 ORTHO05D002893 4.8e-06 55.5 40 72.5
Gohir.D11G019500 Gossypium hirsutum HOM05D002462 ORTHO05D002893 4.8e-06 55.5 31 87.1
Gorai.007G020800 Gossypium raimondii HOM05D002462 ORTHO05D002893 4.8e-06 55.5 31 87.1
Hma1.2p1_1868F.1_g306000 Hydrangea macrophylla HOM05D002462 ORTHO05D002893 4.8e-06 55.5 37 75.7
Sabra03G0078600 Salix brachista HOM05D002462 ORTHO05D002893 4.8e-06 55.5 50 62.0
Gohir.A09G195100 Gossypium hirsutum HOM05D002462 ORTHO05D002893 8.1e-06 54.7 31 83.9
Gohir.A11G019800 Gossypium hirsutum HOM05D002462 ORTHO05D002893 8.1e-06 54.7 31 87.1


User provided reference genes

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