Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 3.4e-220 768.1 402 100.0
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 4.4e-119 432.2 267 86.1
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.4e-109 399.8 267 80.5
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 1.3e-102 377.5 266 75.9
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 1.8e-99 367.1 266 75.2
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 2.3e-99 366.7 266 74.8
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 3.9e-99 365.9 266 73.7
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 1.5e-98 364.0 266 73.3
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 3.6e-97 359.4 266 73.7
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 4.8e-97 359.0 268 72.8
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 1.1e-96 357.8 266 72.9
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 5.3e-96 355.5 269 73.6
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 1.2e-95 354.4 246 77.6
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 2.6e-95 353.2 268 72.8
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 9.9e-95 351.3 269 72.5
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 1.4e-93 347.4 267 71.2
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.4e-93 347.4 278 70.5
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 1.9e-93 347.1 273 72.5
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 2.4e-93 346.7 286 67.1
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 3.2e-93 346.3 286 67.1
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 1.2e-92 344.4 279 68.8
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 2.1e-92 343.6 267 72.3
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 3.5e-92 342.8 270 71.1
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 3.0e-91 339.7 274 71.2
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 3.9e-91 339.3 279 67.4
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 8.7e-91 338.2 275 69.8
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 1.1e-90 337.8 301 66.1
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 1.5e-90 337.4 280 68.6
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 4.3e-90 335.9 398 53.3
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 4.3e-90 335.9 269 70.6
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 1.6e-89 334.0 249 73.9
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 2.1e-89 333.6 250 73.6
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 2.8e-89 333.2 268 68.7
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 4.8e-89 332.4 250 73.2
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 6.2e-89 332.0 249 73.5
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 8.1e-89 331.6 249 72.7
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 1.4e-88 330.9 292 64.4
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 1.4e-88 330.9 278 66.2
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 1.8e-88 330.5 278 67.6
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 3.1e-88 329.7 278 66.5
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 1.2e-87 327.8 244 73.0
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 4.5e-87 325.9 267 70.8
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 5.8e-87 325.5 274 68.6
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 5.8e-87 325.5 280 67.1
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 2.2e-86 323.6 268 67.9
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 2.2e-86 323.6 283 66.8
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 4.9e-86 322.4 282 63.8
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 4.9e-86 322.4 298 60.7
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 8.4e-86 321.6 280 66.1
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 2.5e-85 320.1 271 67.2
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 7.1e-85 318.5 289 64.4
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 7.1e-85 318.5 280 65.4
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 1.6e-84 317.4 272 65.8
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 1.6e-84 317.4 272 65.8
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 3.5e-84 316.2 272 66.5
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 4.6e-84 315.8 285 62.1
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 6.0e-84 315.5 276 67.0
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 6.0e-84 315.5 272 65.4
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 6.0e-84 315.5 279 63.4
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 7.9e-84 315.1 285 61.1
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 1.3e-83 314.3 278 65.8
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 1.3e-83 314.3 276 65.6
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 1.8e-83 313.9 243 71.2
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.8e-83 313.9 282 65.6
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 2.3e-83 313.5 243 71.2
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 3.9e-83 312.8 246 69.5
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 3.9e-83 312.8 285 61.8
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 6.7e-83 312.0 286 61.9
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 1.1e-82 311.2 299 59.9
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 1.5e-82 310.8 210 77.6
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 1.9e-82 310.5 252 70.2
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 5.7e-82 308.9 297 59.9
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 1.6e-81 307.4 299 58.9
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 1.6e-81 307.4 274 64.6
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.6e-81 307.4 274 64.6
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 3.7e-81 306.2 302 59.6
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 3.7e-81 306.2 268 63.8
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 1.8e-80 303.9 307 59.0
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 5.3e-80 302.4 272 64.3
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 5.3e-80 302.4 271 61.6
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 3.4e-79 299.7 298 59.4
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 7.6e-79 298.5 291 60.8
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 6.5e-78 295.4 276 63.0
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 6.5e-78 295.4 276 63.0
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 2.7e-76 290.0 283 59.7
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 2.7e-76 290.0 321 53.9
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 4.6e-76 289.3 275 62.5
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 4.6e-76 289.3 212 71.2
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 6.1e-76 288.9 301 58.1
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 6.1e-76 288.9 275 63.6
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 1.0e-75 288.1 281 59.8
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 1.1e-74 284.6 259 62.9
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 1.3e-73 281.2 306 58.8
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 2.8e-73 280.0 276 60.1
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 2.0e-71 273.9 275 58.5
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 1.0e-70 271.6 180 76.7
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.4e-69 267.7 272 58.8
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 9.7e-66 255.0 274 58.4
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 2.2e-65 253.8 173 76.3
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 2.4e-64 250.4 272 57.7
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 6.9e-64 248.8 173 75.1
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 2.2e-62 243.8 280 56.4
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 7.0e-48 195.7 244 48.0
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 7.0e-48 195.7 135 78.5
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 2.7e-47 193.7 133 76.7
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 8.5e-46 188.7 159 69.8
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 5.5e-45 186.0 141 70.9
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 4.1e-40 169.9 134 70.9
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 9.5e-37 158.7 181 54.1
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 4.7e-36 156.4 126 69.0
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 1.7e-33 147.9 161 56.5
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 2.1e-28 131.0 116 65.5
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 9.8e-26 122.1 77 79.2
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 8.3e-25 119.0 95 70.5
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 9.5e-21 105.5 209 39.2
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 1.2e-20 105.1 110 61.8
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.8e-19 101.3 106 62.3
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 1.1e-08 65.5 97 46.4
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 1.9e-08 64.7 42 69.0
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 5.4e-08 63.2 72 55.6
Cre10.g423350 Chlamydomonas reinhardtii HOM05D006579 ORTHO05D007783 3.0e-06 57.4 187 31.0


User provided reference genes

Program Settings