Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07780 Selenicereus undatus HOM05D004206 ORTHO05D003325 8.6e-207 723.4 360 100.0
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 2.8e-48 196.8 265 47.5
EL10Ac9g20956 Beta vulgaris HOM05D004206 ORTHO05D003325 1.5e-46 191.0 252 48.4
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 5.5e-44 182.6 273 46.5
AUR62041741 Chenopodium quinoa HOM05D004206 ORTHO05D003325 2.7e-43 180.3 253 46.2
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 2.0e-25 120.9 274 37.6
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 1.4e-23 114.8 198 42.4
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 1.6e-22 111.3 202 39.1
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 4.2e-20 103.2 152 46.1
CSS0004803 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 3.6e-19 100.1 154 44.2
Actinidia26442 Actinidia chinensis HOM05D004206 ORTHO05D003325 4.7e-19 99.8 273 33.0
Lj3C971T5 Lonicera japonica HOM05D004206 ORTHO05D003325 1.3e-16 91.7 166 40.4
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 2.2e-16 90.9 145 46.2
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 3.7e-16 90.1 154 38.3
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 1.1e-15 88.6 153 38.6
Cc06_g02970 Coffea canephora HOM05D004206 ORTHO05D003325 1.4e-15 88.2 154 40.3
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 1.8e-15 87.8 205 35.1
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 1.8e-15 87.8 183 37.7
Aqoxy2G02033 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 2.4e-15 87.4 155 39.4
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.4e-15 87.4 168 36.9
vmacro20128 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 7.0e-15 85.9 168 40.5
SalBow3G3817 Salvia bowleyana HOM05D004206 ORTHO05D003325 9.1e-15 85.5 154 44.8
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 2.0e-14 84.3 154 40.3
PGSC0003DMG400008929 Solanum tuberosum HOM05D004206 ORTHO05D003325 2.7e-14 84.0 162 37.7
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 4.5e-14 83.2 154 40.3
Rhsim05G0188200 Rhododendron simsii HOM05D004206 ORTHO05D003325 4.5e-14 83.2 154 38.3
Nitab4.5_0002077g0110 Nicotiana tabacum HOM05D004206 ORTHO05D003325 5.9e-14 82.8 251 33.5
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 1.0e-13 82.0 161 38.5
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 2.2e-13 80.9 166 36.1
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.9e-13 80.5 168 35.7
Nitab4.5_0000349g0070 Nicotiana tabacum HOM05D004206 ORTHO05D003325 2.9e-13 80.5 153 38.6
SalBow4G2008 Salvia bowleyana HOM05D004206 ORTHO05D003325 2.9e-13 80.5 196 35.7
Oeu036176.1 Olea europaea HOM05D004206 ORTHO05D003325 3.8e-13 80.1 169 34.9
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 5.0e-13 79.7 226 32.3
Sopen09g005150 Solanum pennellii HOM05D004206 ORTHO05D003325 5.0e-13 79.7 224 32.1
Peaxi162Scf00039g01222 Petunia axillaris HOM05D004206 ORTHO05D003325 6.5e-13 79.3 218 35.3
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 1.1e-12 78.6 168 35.1
Oeu026485.2 Olea europaea HOM05D004206 ORTHO05D003325 1.1e-12 78.6 169 36.1
Hma1.2p1_1707F.1_g298550 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 2.5e-12 77.4 274 31.4
Aqoxy4G02996 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 4.2e-12 76.6 180 35.6
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 4.2e-12 76.6 146 43.2
Solyc09g010410.3 Solanum lycopersicum HOM05D004206 ORTHO05D003325 5.5e-12 76.3 223 31.4
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 7.2e-12 75.9 156 37.8
Nitab4.5_0000527g0130 Nicotiana tabacum HOM05D004206 ORTHO05D003325 7.2e-12 75.9 153 38.6
Nitab4.5_0009149g0020 Nicotiana tabacum HOM05D004206 ORTHO05D003325 7.2e-12 75.9 164 37.2
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 7.2e-12 75.9 165 35.8
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 1.2e-11 75.1 154 35.7
Hma1.2p1_1065F.1_g253750 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 1.2e-11 75.1 154 35.7
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 1.2e-11 75.1 154 40.3
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 2.7e-11 73.9 157 38.9
Peaxi162Scf00407g00067 Petunia axillaris HOM05D004206 ORTHO05D003325 3.6e-11 73.6 145 37.9
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 4.7e-11 73.2 157 38.2
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 4.7e-11 73.2 157 38.2
Actinidia13126 Actinidia chinensis HOM05D004206 ORTHO05D003325 6.1e-11 72.8 193 33.2
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 6.1e-11 72.8 156 38.5
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 6.1e-11 72.8 147 40.1
Prupe.6G250300 Prunus persica HOM05D004206 ORTHO05D003325 8.0e-11 72.4 160 40.0
Lalb_Chr21g0314341 Lupinus albus HOM05D004206 ORTHO05D003325 1.0e-10 72.0 181 36.5
TWI77G0356 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 1.4e-10 71.6 157 37.6
Eucgr.K03159 Eucalyptus grandis HOM05D004206 ORTHO05D003325 1.8e-10 71.2 251 28.7
Gohir.A11G326100 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.8e-10 71.2 152 34.2
CAN.G97.20 Capsicum annuum HOM05D004206 ORTHO05D003325 2.3e-10 70.9 242 31.0
Ca_08787_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 3.0e-10 70.5 154 37.0
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 3.0e-10 70.5 156 35.9
Lsat_1_v5_gn_1_55680 Lactuca sativa HOM05D004206 ORTHO05D003325 3.0e-10 70.5 96 47.9
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 4.0e-10 70.1 154 37.0
PGR004G1990 Punica granatum HOM05D004206 ORTHO05D003325 4.0e-10 70.1 137 38.0
Haze_20742 Corylus avellana HOM05D004206 ORTHO05D003325 6.8e-10 69.3 153 37.9
SGA_v2.0_scaffold126G33821 Striga asiatica HOM05D004206 ORTHO05D003325 6.8e-10 69.3 157 37.6
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 8.8e-10 68.9 205 36.6
CiPaw.10G143300 Carya illinoinensis HOM05D004206 ORTHO05D003325 8.8e-10 68.9 153 35.3
Potri.006G082100 Populus trichocarpa HOM05D004206 ORTHO05D003325 1.2e-09 68.6 117 41.9
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 1.5e-09 68.2 210 32.9
CSS0042901 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 2.0e-09 67.8 156 35.3
vmacro08670 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 2.0e-09 67.8 150 35.3
PGSC0003DMG401019213 Solanum tuberosum HOM05D004206 ORTHO05D003325 2.6e-09 67.4 160 35.6
Migut.J00362 Erythranthe guttata HOM05D004206 ORTHO05D003325 3.4e-09 67.0 203 31.5
CiPaw.09G188800 Carya illinoinensis HOM05D004206 ORTHO05D003325 4.4e-09 66.6 153 35.9
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 4.4e-09 66.6 164 32.9
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 4.4e-09 66.6 164 33.5
CSS0043919 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 5.7e-09 66.2 160 38.1
HanXRQChr14g0453751 Helianthus annuus HOM05D004206 ORTHO05D003325 7.5e-09 65.9 148 38.5
MSTRG.26756 Avicennia marina HOM05D004206 ORTHO05D003325 9.8e-09 65.5 144 34.0
Lsat_1_v5_gn_2_110540 Lactuca sativa HOM05D004206 ORTHO05D003325 9.8e-09 65.5 210 33.3
arahy.Tifrunner.gnm1.ann1.72TEPU Arachis hypogaea HOM05D004206 ORTHO05D003325 1.3e-08 65.1 174 34.5
Lalb_Chr06g0171041 Lupinus albus HOM05D004206 ORTHO05D003325 1.3e-08 65.1 153 38.6
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 1.3e-08 65.1 160 38.8
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 2.2e-08 64.3 87 51.7
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 2.2e-08 64.3 89 47.2
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 2.8e-08 63.9 153 35.3
Actinidia05297 Actinidia chinensis HOM05D004206 ORTHO05D003325 3.7e-08 63.5 44 65.9
Gohir.D11G345000 Gossypium hirsutum HOM05D004206 ORTHO05D003325 3.7e-08 63.5 154 34.4
HanXRQChr07g0196151 Helianthus annuus HOM05D004206 ORTHO05D003325 3.7e-08 63.5 167 35.3
PSO339G0439 Papaver somniferum HOM05D004206 ORTHO05D003325 3.7e-08 63.5 162 37.0
Cfa017429 Carpinus fangiana HOM05D004206 ORTHO05D003325 4.8e-08 63.2 95 45.3
Lalb_Chr20g0113171 Lupinus albus HOM05D004206 ORTHO05D003325 4.8e-08 63.2 157 33.1
PGR004G0289 Punica granatum HOM05D004206 ORTHO05D003325 4.8e-08 63.2 140 36.4
Sabra06G0062000 Salix brachista HOM05D004206 ORTHO05D003325 4.8e-08 63.2 146 37.0
CARHR132120 Cardamine hirsuta HOM05D008508 ORTHO05D003325 6.3e-08 62.8 105 41.0
Cpa.g.sc11.170 Carica papaya HOM05D004206 ORTHO05D003325 6.3e-08 62.8 43 65.1
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 6.3e-08 62.8 81 55.6
Eucgr.A01242 Eucalyptus grandis HOM05D004206 ORTHO05D003325 6.3e-08 62.8 77 49.4
Gorai.007G375400 Gossypium raimondii HOM05D004206 ORTHO05D003325 6.3e-08 62.8 155 34.8
PSO206G0053 Papaver somniferum HOM05D004206 ORTHO05D003325 8.3e-08 62.4 147 38.8
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 1.1e-07 62.0 176 30.7
Gohir.D04G119400 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.8e-07 61.2 154 33.8
Gorai.012G101500 Gossypium raimondii HOM05D004206 ORTHO05D003325 1.8e-07 61.2 154 33.8
Solyc10g086360.2 Solanum lycopersicum HOM05D004206 ORTHO05D003325 1.8e-07 61.2 158 31.6
TWI53G0070 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 1.8e-07 61.2 239 31.8
Aa31LG10G9300 Aethionema arabicum HOM05D008508 ORTHO05D003325 2.4e-07 60.8 66 51.5
Zm00001eb149900 Zea mays HOM05D033995 ORTHO05D003325 2.4e-07 60.8 148 35.8
MSTRG.19101 Avicennia marina HOM05D004206 ORTHO05D003325 3.1e-07 60.5 69 52.2
QL05p010542 Quercus lobata HOM05D004206 ORTHO05D003325 3.1e-07 60.5 189 33.9
QL07p047329 Quercus lobata HOM05D004206 ORTHO05D003325 3.1e-07 60.5 189 33.9
SGA_v2.0_scaffold75G24932 Striga asiatica HOM05D004206 ORTHO05D003325 3.1e-07 60.5 72 54.2
ECA233G2126 Erigeron canadensis HOM05D004206 ORTHO05D003325 4.1e-07 60.1 138 39.9
Manes.09G086700 Manihot esculenta HOM05D004206 ORTHO05D003325 4.1e-07 60.1 146 35.6
vmacro03102 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 4.1e-07 60.1 84 47.6
PGR004G2702 Punica granatum HOM05D004206 ORTHO05D003325 5.4e-07 59.7 165 33.9
Sopen10g035740 Solanum pennellii HOM05D004206 ORTHO05D003325 5.4e-07 59.7 158 31.0
Actinidia07050 Actinidia chinensis HOM05D004206 ORTHO05D003325 7.0e-07 59.3 68 51.5
Aa31LG5G22930 Aethionema arabicum HOM05D008508 ORTHO05D003325 7.0e-07 59.3 65 47.7
MBI05_g10357_MAGBIO Magnolia biondii HOM05D004206 ORTHO05D003325 7.0e-07 59.3 156 34.0
THA.LOC104805432 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 7.0e-07 59.3 97 41.2
VMungo0720G2610 Vigna mungo HOM05D004206 ORTHO05D003325 7.0e-07 59.3 226 32.7
Lj2A99T58 Lonicera japonica HOM05D004206 ORTHO05D003325 9.1e-07 58.9 45 64.4
CsaV3_3G035080 Cucumis sativus L. HOM05D004206 ORTHO05D003325 1.2e-06 58.5 63 52.4
unitig_578.g15702 Utricularia gibba HOM05D004206 ORTHO05D003325 2.0e-06 57.8 74 50.0
Glyma.13G132002 Glycine max HOM05D004206 ORTHO05D003325 2.7e-06 57.4 137 38.0
ATR0559G289 Amborella trichopoda HOM05D004206 ORTHO05D003325 3.5e-06 57.0 204 31.9
Duzib128G2059 Durio zibethinus HOM05D004206 ORTHO05D003325 3.5e-06 57.0 142 33.8
MELO3C009278.2 Cucumis melo HOM05D004206 ORTHO05D003325 4.5e-06 56.6 158 30.4
SEGI_05191 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 4.5e-06 56.6 133 33.8
AL4G33940 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 5.9e-06 56.2 58 53.4
Os01g0814400 Oryza sativa ssp. japonica HOM05D033995 ORTHO05D003325 7.7e-06 55.8 164 37.2


User provided reference genes

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