Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07777 Selenicereus undatus HOM05D006510 ORTHO05D008171 3.6e-39 164.5 84 100.0
GSVIVG01020726001 Vitis vinifera HOM05D006510 ORTHO05D008171 1.4e-19 99.4 66 71.2
FvH4_6g27600 Fragaria vesca HOM05D006510 ORTHO05D008171 7.1e-19 97.1 66 72.7
FAN14G1437 Fragaria x ananassa HOM05D006510 ORTHO05D008171 7.1e-19 97.1 66 72.7
TAR636G1540 Trochodendron aralioides HOM05D006510 ORTHO05D008171 7.1e-19 97.1 66 71.2
Nn8g40464 Nelumbo nucifera HOM05D006510 ORTHO05D008171 9.2e-19 96.7 67 70.1
FAN05G5099 Fragaria x ananassa HOM05D006510 ORTHO05D008171 1.6e-18 95.9 66 71.2
MD11G1004500 Malus domestica HOM05D006510 ORTHO05D008171 2.1e-18 95.5 66 66.7
FAN02G4134 Fragaria x ananassa HOM05D006510 ORTHO05D008171 2.7e-18 95.1 66 71.2
Potri.014G142900 Populus trichocarpa HOM05D006510 ORTHO05D008171 3.5e-18 94.7 67 68.7
Hma1.2p1_0178F.1_g078710 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 4.6e-18 94.4 65 70.8
RcHm_v2.0_Chr2g0130091 Rosa chinensis HOM05D006510 ORTHO05D008171 4.6e-18 94.4 66 68.2
Actinidia03942 Actinidia chinensis HOM05D006510 ORTHO05D008171 6.0e-18 94.0 66 71.2
CSS0034147 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 6.0e-18 94.0 66 69.7
CSS0039339 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 6.0e-18 94.0 66 69.7
Prupe.3G115700 Prunus persica HOM05D006510 ORTHO05D008171 6.0e-18 94.0 66 66.7
Dinv07685 Davidia involucrata HOM05D006510 ORTHO05D008171 7.8e-18 93.6 66 69.7
Lalb_Chr24g0400131 Lupinus albus HOM05D006510 ORTHO05D008171 1.7e-17 92.4 66 68.2
MBI16_g39629_MAGBIO Magnolia biondii HOM05D006510 ORTHO05D008171 1.7e-17 92.4 65 67.7
Rhsim04G0074900 Rhododendron simsii HOM05D006510 ORTHO05D008171 2.3e-17 92.0 66 68.2
Phvul.011G128400 Phaseolus vulgaris HOM05D006510 ORTHO05D008171 3.0e-17 91.7 66 66.7
VMungo1127G1894 Vigna mungo HOM05D006510 ORTHO05D008171 3.0e-17 91.7 71 63.4
Duzib147G0397 Durio zibethinus HOM05D006510 ORTHO05D008171 3.9e-17 91.3 66 65.2
COL.COLO4_33599 Corchorus olitorius HOM05D006510 ORTHO05D008171 5.1e-17 90.9 65 67.7
Cpa.g.c45723 Carica papaya HOM05D006510 ORTHO05D008171 1.1e-16 89.7 63 66.7
Sabra14G0108000 Salix brachista HOM05D006510 ORTHO05D008171 1.1e-16 89.7 67 65.7
CiPaw.03G194300 Carya illinoinensis HOM05D006510 ORTHO05D008171 1.9e-16 89.0 66 63.6
QL08p042146 Quercus lobata HOM05D006510 ORTHO05D008171 1.9e-16 89.0 66 65.2
TPR.G16532 Trifolium pratense HOM05D006510 ORTHO05D008171 2.5e-16 88.6 65 66.2
Glyma.06G276100 Glycine max HOM05D006510 ORTHO05D008171 3.3e-16 88.2 66 66.7
Lj3g0027149 Lotus japonicus HOM05D006510 ORTHO05D008171 3.3e-16 88.2 66 65.2
PSO478G4451 Papaver somniferum HOM05D006510 ORTHO05D008171 3.3e-16 88.2 66 62.1
Ca_18866_v3 Cicer arietinum L. HOM05D006510 ORTHO05D008171 4.3e-16 87.8 65 63.1
ClCG07G002720 Citrullus lanatus HOM05D006510 ORTHO05D008171 4.3e-16 87.8 66 60.6
PSO782G3259 Papaver somniferum HOM05D006510 ORTHO05D008171 5.6e-16 87.4 66 62.1
TPR.G13821 Trifolium pratense HOM05D006510 ORTHO05D008171 5.6e-16 87.4 65 66.2
Thecc.01G152700 Theobroma cacao HOM05D006510 ORTHO05D008171 7.3e-16 87.0 66 59.1
Cfa021921 Carpinus fangiana HOM05D006510 ORTHO05D008171 9.5e-16 86.7 66 63.6
Haze_13408 Corylus avellana HOM05D006510 ORTHO05D008171 9.5e-16 86.7 66 63.6
Glyma.12G129300 Glycine max HOM05D006510 ORTHO05D008171 9.5e-16 86.7 66 65.2
Psat7g163800 Pisum sativum HOM05D006510 ORTHO05D008171 9.5e-16 86.7 65 66.2
Ciclev10014241m.g Citrus clementina HOM05D006510 ORTHO05D008171 2.1e-15 85.5 66 60.6
Gohir.A09G003200 Gossypium hirsutum HOM05D006510 ORTHO05D008171 2.1e-15 85.5 65 61.5
Gohir.D09G003000 Gossypium hirsutum HOM05D006510 ORTHO05D008171 2.1e-15 85.5 65 61.5
Gorai.006G003700 Gossypium raimondii HOM05D006510 ORTHO05D008171 2.1e-15 85.5 65 61.5
Cc05_g08450 Coffea canephora HOM05D006510 ORTHO05D008171 2.8e-15 85.1 64 65.6
TWI38G0436 Tripterygium wilfordii HOM05D006510 ORTHO05D008171 2.8e-15 85.1 66 60.6
MELO3C002806.2 Cucumis melo HOM05D006510 ORTHO05D008171 3.6e-15 84.7 66 57.6
Sed0011358 Sechium edule HOM05D006510 ORTHO05D008171 3.6e-15 84.7 66 57.6
vmacro09212 Vaccinium macrocarpon HOM05D006510 ORTHO05D008171 4.7e-15 84.3 51 78.4
DCAR_013276 Daucus carota HOM05D006510 ORTHO05D008171 8.1e-15 83.6 65 64.6
arahy.Tifrunner.gnm1.ann1.J1H900 Arachis hypogaea HOM05D006510 ORTHO05D008171 1.1e-14 83.2 65 64.6
arahy.Tifrunner.gnm1.ann1.JGR80D Arachis hypogaea HOM05D006510 ORTHO05D008171 1.1e-14 83.2 65 64.6
CsaV3_1G037360 Cucumis sativus L. HOM05D006510 ORTHO05D008171 1.1e-14 83.2 66 56.1
unitig_46.g18272 Utricularia gibba HOM05D006510 ORTHO05D008171 1.1e-14 83.2 66 60.6
Migut.M00272 Erythranthe guttata HOM05D006510 ORTHO05D008171 1.8e-14 82.4 66 60.6
Aqoxy5G02856 Aquilegia oxysepala HOM05D006510 ORTHO05D008171 2.4e-14 82.0 66 56.1
Medtr4g080110 Medicago truncatula HOM05D006510 ORTHO05D008171 5.2e-14 80.9 65 61.5
Eucgr.K01140 Eucalyptus grandis HOM05D006510 ORTHO05D008171 6.8e-14 80.5 65 58.5
Lsat_1_v5_gn_4_64481 Lactuca sativa HOM05D006510 ORTHO05D008171 6.8e-14 80.5 66 60.6
EL10Ac9g20963 Beta vulgaris HOM05D006510 ORTHO05D008171 1.5e-13 79.3 49 71.4
CANSAT78G1126 Cannabis sativa HOM05D006510 ORTHO05D008171 1.5e-13 79.3 66 56.1
Solyc12g013950.2 Solanum lycopersicum HOM05D006510 ORTHO05D008171 1.5e-13 79.3 66 59.1
PGSC0003DMG400015368 Solanum tuberosum HOM05D006510 ORTHO05D008171 1.5e-13 79.3 66 57.6
SGA_v2.0_scaffold9G04837 Striga asiatica HOM05D006510 ORTHO05D008171 1.5e-13 79.3 67 58.2
ECA248G1772 Erigeron canadensis HOM05D006510 ORTHO05D008171 3.4e-13 78.2 67 58.2
PGR142G2695 Punica granatum HOM05D006510 ORTHO05D008171 3.4e-13 78.2 66 56.1
Sopen12g005700 Solanum pennellii HOM05D006510 ORTHO05D008171 3.4e-13 78.2 66 56.1
AUR62029599 Chenopodium quinoa HOM05D006510 ORTHO05D008171 4.4e-13 77.8 49 73.5
Lj8C100T15 Lonicera japonica HOM05D006510 ORTHO05D008171 4.4e-13 77.8 53 69.8
AT2G42700 Arabidopsis thaliana HOM05D006510 ORTHO05D008171 5.8e-13 77.4 65 56.9
THA.LOC104823853 Tarenaya hassleriana HOM05D006510 ORTHO05D008171 5.8e-13 77.4 65 56.9
Carub.0004s2514 Capsella rubella HOM05D006510 ORTHO05D008171 7.6e-13 77.0 65 56.9
Manes.07G057100 Manihot esculenta HOM05D006510 ORTHO05D008171 7.6e-13 77.0 67 52.2
unitig_46.g18270 Utricularia gibba HOM05D006510 ORTHO05D008171 7.6e-13 77.0 65 56.9
CAN.G1716.4 Capsicum annuum HOM05D006510 ORTHO05D008171 9.9e-13 76.6 66 54.5
AUR62041733 Chenopodium quinoa HOM05D006510 ORTHO05D008171 1.7e-12 75.9 54 64.8
AL4G41260 Arabidopsis lyrata HOM05D006510 ORTHO05D008171 2.2e-12 75.5 65 55.4
Ah.01g004980 Amaranthus hybridus HOM05D006510 ORTHO05D008171 2.9e-12 75.1 49 71.4
Thhalv10016247m.g Eutrema salsugineum HOM05D006510 ORTHO05D008171 2.9e-12 75.1 63 57.1
CARHR137800 Cardamine hirsuta HOM05D006510 ORTHO05D008171 4.9e-12 74.3 65 55.4
Aa31LG1G24480 Aethionema arabicum HOM05D006510 ORTHO05D008171 1.1e-11 73.2 65 52.3
CDE04G2642 Ceratophyllum demersum HOM05D006510 ORTHO05D008171 1.9e-11 72.4 65 52.3
Sp4g24850 Schrenkiella parvula HOM05D006510 ORTHO05D008171 1.9e-11 72.4 65 52.3
A05p03350 Brassica napus HOM05D006510 ORTHO05D008171 2.4e-11 72.0 65 52.3
C04p03920 Brassica napus HOM05D006510 ORTHO05D008171 2.4e-11 72.0 65 52.3
BolC4t22028H Brassica oleracea HOM05D006510 ORTHO05D008171 2.4e-11 72.0 65 52.3
BraA05t19323Z Brassica rapa HOM05D006510 ORTHO05D008171 2.4e-11 72.0 65 52.3
Os11g0169100 Oryza sativa ssp. japonica HOM05D006510 ORTHO05D008171 7.1e-11 70.5 63 55.6
HPP92_014652 Vanilla planifolia HOM05D006510 ORTHO05D008171 1.6e-10 69.3 63 49.2
Peaxi162Scf00229g01116 Petunia axillaris HOM05D006510 ORTHO05D008171 5.1e-09 64.3 50 62.0
ATR0796G261 Amborella trichopoda HOM05D006510 ORTHO05D008171 3.3e-08 61.6 57 52.6
Nitab4.5_0002027g0190 Nicotiana tabacum HOM05D006510 ORTHO05D008171 9.6e-08 60.1 50 58.0
Nitab4.5_0006142g0020 Nicotiana tabacum HOM05D006510 ORTHO05D008171 9.6e-08 60.1 50 58.0
Lsat_1_v5_gn_4_67501 Lactuca sativa HOM05D001373 ORTHO05D001330 2.8e-07 58.5 44 63.6
Pp3c9_21860 Physcomitrium patens HOM05D006510 ORTHO05D008171 3.6e-07 58.2 64 34.4
Mapoly0047s0091 Marchantia polymorpha HOM05D006510 ORTHO05D008171 8.1e-07 57.0 64 42.2
SEGI_32298 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 1.1e-06 56.6 47 51.1
arahy.Tifrunner.gnm1.ann1.JPYC3C Arachis hypogaea HOM05D006510 ORTHO05D008171 1.4e-06 56.2 42 64.3
SMO164G0050 Selaginella moellendorffii HOM05D006510 ORTHO05D008171 9.0e-06 53.5 52 51.9


User provided reference genes

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