Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 1.1e-72 276.6 136 100.0
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 1.2e-52 209.9 139 73.4
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 8.1e-49 197.2 135 70.4
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 2.6e-47 192.2 142 66.9
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 5.8e-47 191.0 134 68.7
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 3.8e-46 188.3 134 67.2
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 6.4e-46 187.6 134 67.9
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 8.4e-46 187.2 134 69.4
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 5.4e-45 184.5 134 67.2
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 9.3e-45 183.7 138 67.4
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 1.2e-44 183.3 134 69.4
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 6.0e-44 181.0 135 66.7
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 1.3e-43 179.9 134 65.7
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 1.8e-43 179.5 134 67.9
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 6.7e-43 177.6 134 67.2
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 6.7e-43 177.6 135 66.7
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 6.7e-43 177.6 134 65.7
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 6.7e-43 177.6 128 68.0
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.5e-42 176.4 134 64.2
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 1.5e-42 176.4 135 66.7
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 2.5e-42 175.6 145 60.0
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 2.5e-42 175.6 135 66.7
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 4.3e-42 174.9 130 69.2
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 4.3e-42 174.9 136 64.0
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 7.4e-42 174.1 135 65.9
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 9.6e-42 173.7 134 66.4
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 9.6e-42 173.7 133 63.2
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 1.3e-41 173.3 139 63.3
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 1.3e-41 173.3 134 62.7
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 2.1e-41 172.6 134 63.4
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 2.1e-41 172.6 132 61.4
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 3.7e-41 171.8 134 65.7
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 6.2e-41 171.0 139 64.0
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 8.1e-41 170.6 135 64.4
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 8.1e-41 170.6 143 58.7
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 8.1e-41 170.6 129 65.1
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 1.1e-40 170.2 140 61.4
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 1.8e-40 169.5 139 60.4
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 2.4e-40 169.1 135 60.7
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 2.4e-40 169.1 129 64.3
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 5.3e-40 167.9 135 60.0
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 5.3e-40 167.9 139 61.2
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 5.3e-40 167.9 139 61.2
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 6.9e-40 167.5 136 58.8
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 6.9e-40 167.5 134 60.4
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 1.2e-39 166.8 134 58.2
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 1.2e-39 166.8 139 61.2
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 1.5e-39 166.4 134 62.7
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 1.5e-39 166.4 134 58.2
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 1.5e-39 166.4 139 59.7
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 2.0e-39 166.0 142 62.7
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 3.4e-39 165.2 135 60.0
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 4.5e-39 164.9 144 59.7
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 4.5e-39 164.9 137 62.0
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 9.9e-39 163.7 137 58.4
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 1.3e-38 163.3 136 59.6
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 1.3e-38 163.3 139 61.9
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 1.7e-38 162.9 135 62.2
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 2.2e-38 162.5 141 60.3
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 2.9e-38 162.2 137 59.1
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 2.9e-38 162.2 137 59.1
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 2.9e-38 162.2 137 59.1
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 4.9e-38 161.4 170 52.9
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 4.9e-38 161.4 134 56.7
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 8.4e-38 160.6 137 59.1
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 8.4e-38 160.6 137 59.1
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 8.4e-38 160.6 135 60.0
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 1.9e-37 159.5 140 57.1
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 1.9e-37 159.5 138 56.5
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 7.1e-37 157.5 140 59.3
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 7.1e-37 157.5 134 56.7
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 9.3e-37 157.1 139 60.4
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 1.6e-36 156.4 137 57.7
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 2.7e-36 155.6 156 55.1
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 6.0e-36 154.5 138 59.4
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 5.6e-34 147.9 133 57.1
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 8.2e-33 144.1 134 55.2
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 2.4e-32 142.5 134 54.5
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 3.1e-32 142.1 107 66.4
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 3.2e-29 132.1 99 64.6
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 1.2e-28 130.2 96 65.6
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 1.5e-26 123.2 136 48.5
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 1.5e-26 123.2 136 48.5
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.9e-26 122.9 100 60.0
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 3.1e-24 115.5 140 47.1
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 6.9e-24 114.4 101 57.4
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 6.9e-24 114.4 101 62.4
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 6.9e-24 114.4 120 52.5
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 1.0e-22 110.5 140 47.1
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 5.5e-21 104.8 123 48.8
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 7.2e-21 104.4 98 54.1
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 7.2e-21 104.4 82 61.0
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 9.4e-21 104.0 135 45.2
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 3.6e-20 102.1 93 52.7
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 1.8e-19 99.8 134 45.5
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 5.1e-19 98.2 106 47.2
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 7.4e-18 94.4 149 41.6
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 7.4e-18 94.4 83 62.7
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 4.8e-17 91.7 82 62.2
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 1.8e-16 89.7 93 54.8
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 1.7e-14 83.2 80 51.2
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 3.0e-11 72.4 95 44.2
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 9.7e-10 67.4 67 55.2
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 2.2e-09 66.2 90 47.8
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 1.4e-08 63.5 82 46.3
Potri.002G256001 Populus trichocarpa HOM05D007233 ORTHO05D009043 3.1e-08 62.4 132 36.4
Actinidia14340 Actinidia chinensis HOM05D007233 ORTHO05D009043 3.4e-07 58.9 57 57.9


User provided reference genes

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