Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07613 Selenicereus undatus HOM05D008208 ORTHO05D010143 0.0e+00 1472.2 802 100.0
EL10Ac9g21199 Beta vulgaris HOM05D008208 ORTHO05D010143 4.5e-38 164.1 439 36.0
QL05p019674 Quercus lobata HOM05D008208 ORTHO05D010143 3.6e-27 127.9 772 26.8
TAR639G0001 Trochodendron aralioides HOM05D008208 ORTHO05D010143 5.1e-26 124.0 757 28.0
GSVIVG01016967001 Vitis vinifera HOM05D000585 ORTHO05D001841 1.5e-25 122.5 771 27.1
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 6.3e-24 117.1 757 28.4
Actinidia09010 Actinidia chinensis HOM05D008208 ORTHO05D010143 3.1e-23 114.8 716 27.7
Actinidia39131 Actinidia chinensis HOM05D008208 ORTHO05D010143 2.9e-21 108.2 732 27.5
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 2.9e-21 108.2 252 36.1
Duzib192G1063 Durio zibethinus HOM05D008208 ORTHO05D010143 8.5e-21 106.7 344 33.1
Nitab4.5_0004969g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 7.2e-20 103.6 741 27.4
Lj5A52T19 Lonicera japonica HOM05D008208 ORTHO05D010143 6.1e-19 100.5 734 26.0
TAR624G0194 Trochodendron aralioides HOM05D008208 ORTHO05D010143 1.0e-18 99.8 737 26.3
CSS0036998 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 2.0e-17 95.5 739 27.1
vmacro17009 Vaccinium macrocarpon HOM05D008208 ORTHO05D010143 4.4e-17 94.4 765 25.2
CSS0033280 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 1.7e-16 92.4 712 27.7
Nitab4.5_0006022g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 1.1e-15 89.7 725 26.5
Oeu002526.1 Olea europaea HOM05D008208 ORTHO05D010143 1.4e-15 89.4 750 26.3
Manes.11G032600 Manihot esculenta HOM05D008208 ORTHO05D010143 4.1e-15 87.8 335 30.4
Lj9A514T51 Lonicera japonica HOM05D008208 ORTHO05D010143 3.5e-14 84.7 745 24.8
Nn8g39048 Nelumbo nucifera HOM05D008208 ORTHO05D010143 5.9e-14 84.0 767 24.3
PGSC0003DMG400002607 Solanum tuberosum HOM05D008208 ORTHO05D010143 5.9e-14 84.0 723 24.1
Sabra01G0150900 Salix brachista HOM05D008208 ORTHO05D010143 7.7e-14 83.6 239 34.7
Nn6g35343 Nelumbo nucifera HOM05D008208 ORTHO05D010143 1.3e-13 82.8 284 31.3
ClCG07G013360 Citrullus lanatus HOM05D026900 ORTHO05D010143 3.8e-13 81.3 712 26.5
Cc04_g02470 Coffea canephora HOM05D008208 ORTHO05D010143 1.1e-12 79.7 269 34.2
Sc10g0007610 Simmondsia chinensis HOM05D008208 ORTHO05D010143 1.1e-12 79.7 739 25.3
HanXRQChr09g0275691 Helianthus annuus HOM05D008208 ORTHO05D010143 1.5e-12 79.3 323 31.0
Peaxi162Scf00038g01129 Petunia axillaris HOM05D008208 ORTHO05D010143 4.2e-12 77.8 740 25.9
Ciclev10025127m.g Citrus clementina HOM05D008208 ORTHO05D010143 5.5e-12 77.4 742 25.1
MELO3C013005.2 Cucumis melo HOM05D026900 ORTHO05D010143 5.5e-12 77.4 640 25.0
Oeu024259.1 Olea europaea HOM05D008208 ORTHO05D010143 5.5e-12 77.4 336 29.2
MD17G1181700 Malus domestica HOM05D008208 ORTHO05D010143 9.4e-12 76.6 771 26.2
Sopen03g039910 Solanum pennellii HOM05D008208 ORTHO05D010143 9.4e-12 76.6 721 26.9
PSO210G2837 Papaver somniferum HOM05D029104 ORTHO05D010143 4.7e-11 74.3 138 39.9
Solyc03g121080.3 Solanum lycopersicum HOM05D008208 ORTHO05D010143 8.0e-11 73.6 741 24.8
COL.COLO4_30526 Corchorus olitorius HOM05D008208 ORTHO05D010143 1.0e-10 73.2 339 27.4
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 1.0e-10 73.2 751 24.9
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 1.8e-10 72.4 739 27.3
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 1.8e-10 72.4 349 29.2
MD09G1201800 Malus domestica HOM05D008208 ORTHO05D010143 5.2e-10 70.9 805 25.2
RcHm_v2.0_Chr2g0140801 Rosa chinensis HOM05D008208 ORTHO05D010143 2.0e-09 68.9 135 37.0
Gohir.D10G066500 Gossypium hirsutum HOM05D008208 ORTHO05D010143 2.6e-09 68.6 745 27.1
Gorai.011G070600 Gossypium raimondii HOM05D008208 ORTHO05D010143 4.4e-09 67.8 747 26.5
Oeu037295.1 Olea europaea HOM05D004628 ORTHO05D005166 5.7e-09 67.4 166 37.3
Sed0025504 Sechium edule HOM05D026900 ORTHO05D010143 5.7e-09 67.4 756 25.3
Aqoxy1G02129 Aquilegia oxysepala HOM05D057169 ORTHO05D010143 9.8e-09 66.6 353 28.3
Potri.001G190601 Populus trichocarpa HOM05D008208 ORTHO05D010143 9.8e-09 66.6 233 31.3
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 4.8e-08 64.3 132 36.4
CsaV3_3G023500 Cucumis sativus L. HOM05D026900 ORTHO05D010143 6.3e-08 63.9 198 30.8
Migut.I00959 Erythranthe guttata HOM05D008208 ORTHO05D010143 1.1e-07 63.2 135 33.3
CDE02G2770 Ceratophyllum demersum HOM05D046919 ORTHO05D043903 1.8e-07 62.4 124 39.5
Thecc.06G101100 Theobroma cacao HOM05D008208 ORTHO05D010143 1.8e-07 62.4 330 24.8
CiPaw.02G145300 Carya illinoinensis HOM05D008208 ORTHO05D010143 2.4e-07 62.0 188 28.2
MSTRG.11020 Avicennia marina HOM05D008208 ORTHO05D010143 1.2e-06 59.7 392 25.8
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 3.5e-06 58.2 158 36.1


User provided reference genes

Program Settings