Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07491 Selenicereus undatus HOM05D006039 ORTHO05D006797 9.3e-99 363.6 193 100.0
Hund07487 Selenicereus undatus HOM05D000288 ORTHO05D006797 4.5e-77 291.6 162 98.1
EL10Ac4g10308 Beta vulgaris HOM05D006039 ORTHO05D006797 1.2e-37 160.6 163 59.5
Sc16g0011650 Simmondsia chinensis HOM05D006039 ORTHO05D006797 7.7e-37 157.9 163 58.3
AUR62019256 Chenopodium quinoa HOM05D006039 ORTHO05D006797 6.1e-34 148.3 170 55.9
AUR62043683 Chenopodium quinoa HOM05D006039 ORTHO05D006797 1.0e-33 147.5 172 54.7
AUR62005725 Chenopodium quinoa HOM05D006039 ORTHO05D006797 1.4e-33 147.1 172 56.4
Ah.06g193560 Amaranthus hybridus HOM05D006039 ORTHO05D006797 2.2e-31 139.8 164 54.9
Dinv36292 Davidia involucrata HOM05D006039 ORTHO05D006797 1.1e-30 137.5 147 59.2
Solyc11g056640.3 Solanum lycopersicum HOM05D006039 ORTHO05D006797 5.4e-30 135.2 146 56.2
COL.COLO4_24829 Corchorus olitorius HOM05D006039 ORTHO05D006797 1.3e-28 130.6 166 54.2
Nitab4.5_0000175g0040 Nicotiana tabacum HOM05D006039 ORTHO05D006797 6.6e-28 128.3 159 53.5
QL01p005703 Quercus lobata HOM05D006039 ORTHO05D006797 8.6e-28 127.9 160 53.8
Duzib168G2100 Durio zibethinus HOM05D006039 ORTHO05D006797 2.5e-27 126.3 169 53.3
Lj1C361T2 Lonicera japonica HOM05D006039 ORTHO05D006797 3.3e-27 125.9 146 55.5
Oeu014066.1 Olea europaea HOM05D006039 ORTHO05D006797 9.5e-27 124.4 165 54.5
Thecc.09G226300 Theobroma cacao HOM05D006039 ORTHO05D006797 3.6e-26 122.5 159 54.7
Nitab4.5_0002278g0050 Nicotiana tabacum HOM05D006039 ORTHO05D006797 6.1e-26 121.7 149 55.7
TAR623G0385 Trochodendron aralioides HOM05D006039 ORTHO05D006797 1.4e-25 120.6 168 49.4
Haze_23073 Corylus avellana HOM05D006039 ORTHO05D006797 1.8e-25 120.2 158 53.8
Gohir.A13G216000 Gossypium hirsutum HOM05D006039 ORTHO05D006797 3.1e-25 119.4 154 53.2
Atru.chr3.2554 Acer truncatum HOM05D006039 ORTHO05D006797 6.8e-25 118.2 167 52.7
Gohir.D13G219700 Gossypium hirsutum HOM05D006039 ORTHO05D006797 6.8e-25 118.2 154 52.6
Peaxi162Scf00839g00234 Petunia axillaris HOM05D006039 ORTHO05D006797 1.5e-24 117.1 145 53.1
Cc01_g04400 Coffea canephora HOM05D006039 ORTHO05D006797 2.6e-24 116.3 150 52.0
Duzib150G0354 Durio zibethinus HOM05D006039 ORTHO05D006797 2.6e-24 116.3 154 50.6
Actinidia06328 Actinidia chinensis HOM05D006039 ORTHO05D006797 4.4e-24 115.5 155 49.7
Lsat_1_v5_gn_1_67181 Lactuca sativa HOM05D006039 ORTHO05D006797 7.5e-24 114.8 147 53.1
Potri.003G207400 Populus trichocarpa HOM05D006039 ORTHO05D006797 7.5e-24 114.8 164 51.2
Aqoxy3G00443 Aquilegia oxysepala HOM05D006039 ORTHO05D006797 1.3e-23 114.0 150 52.0
TWI32G0154 Tripterygium wilfordii HOM05D006039 ORTHO05D006797 1.3e-23 114.0 175 47.4
Sabra01G0012000 Salix brachista HOM05D006039 ORTHO05D006797 3.7e-23 112.5 162 50.6
arahy.Tifrunner.gnm1.ann1.CQR7QS Arachis hypogaea HOM05D006039 ORTHO05D006797 6.4e-23 111.7 162 50.6
vmacro12713 Vaccinium macrocarpon HOM05D006039 ORTHO05D006797 8.3e-23 111.3 147 50.3
MBI01_g36435_MAGBIO Magnolia biondii HOM05D006039 ORTHO05D006797 1.9e-22 110.2 178 44.9
Potri.001G017100 Populus trichocarpa HOM05D006039 ORTHO05D006797 4.1e-22 109.0 163 51.5
CSS0020882 Camellia sinensis var. sinensis HOM05D006039 ORTHO05D006797 5.4e-22 108.6 166 50.0
Nn2g15509 Nelumbo nucifera HOM05D006039 ORTHO05D006797 5.4e-22 108.6 160 47.5
Prupe.6G022100 Prunus persica HOM05D006039 ORTHO05D006797 7.0e-22 108.2 159 47.2
Cpa.g.sc84.90 Carica papaya HOM05D006039 ORTHO05D006797 1.6e-21 107.1 168 50.6
ClCG02G023440 Citrullus lanatus HOM05D006039 ORTHO05D006797 2.7e-21 106.3 165 46.7
Manes.06G167800 Manihot esculenta HOM05D006039 ORTHO05D006797 2.7e-21 106.3 162 48.1
CSS0048119 Camellia sinensis var. sinensis HOM05D006039 ORTHO05D006797 3.5e-21 105.9 166 49.4
CANSAT54G2219 Cannabis sativa HOM05D006039 ORTHO05D006797 4.6e-21 105.5 170 47.6
MELO3C014616.2 Cucumis melo HOM05D006039 ORTHO05D006797 6.0e-21 105.1 193 43.0
arahy.Tifrunner.gnm1.ann1.IJ2E5N Arachis hypogaea HOM05D006039 ORTHO05D006797 1.0e-20 104.4 160 49.4
Manes.14G013400 Manihot esculenta HOM05D006039 ORTHO05D006797 1.0e-20 104.4 158 48.1
Eucgr.B03667 Eucalyptus grandis HOM05D006039 ORTHO05D006797 1.3e-20 104.0 161 49.7
RcHm_v2.0_Chr5g0077351 Rosa chinensis HOM05D006039 ORTHO05D006797 2.3e-20 103.2 157 48.4
Haze_23701 Corylus avellana HOM05D006039 ORTHO05D006797 3.0e-20 102.8 171 47.4
Lalb_Chr22g0352291 Lupinus albus HOM05D006039 ORTHO05D006797 3.9e-20 102.4 143 49.7
TAR636G1066 Trochodendron aralioides HOM05D004785 ORTHO05D005704 3.9e-20 102.4 147 48.3
GSVIVG01025314001 Vitis vinifera HOM05D006039 ORTHO05D006797 6.6e-20 101.7 129 52.7
Glyma.15G032500 Glycine max HOM05D006039 ORTHO05D006797 8.6e-20 101.3 155 52.3
CsaV3_4G024070 Cucumis sativus L. HOM05D006039 ORTHO05D006797 1.5e-19 100.5 160 47.5
Lj3g0020392 Lotus japonicus HOM05D006039 ORTHO05D006797 1.9e-19 100.1 156 46.8
MSTRG.17577 Avicennia marina HOM05D006039 ORTHO05D006797 2.5e-19 99.8 149 48.3
CiPaw.14G122300 Carya illinoinensis HOM05D006039 ORTHO05D006797 3.3e-19 99.4 137 52.6
Haze_23655 Corylus avellana HOM05D006039 ORTHO05D006797 3.3e-19 99.4 163 48.5
PSO384G3161 Papaver somniferum HOM05D006039 ORTHO05D006797 5.6e-19 98.6 147 48.3
Cfa009719 Carpinus fangiana HOM05D006039 ORTHO05D006797 7.3e-19 98.2 161 48.4
TPR.G6898 Trifolium pratense HOM05D006039 ORTHO05D006797 7.3e-19 98.2 154 48.7
Haze_23656 Corylus avellana HOM05D006039 ORTHO05D006797 9.5e-19 97.8 163 48.5
PSO339G2813 Papaver somniferum HOM05D006039 ORTHO05D006797 1.2e-18 97.4 147 47.6
THA.LOC104804971 Tarenaya hassleriana HOM05D006039 ORTHO05D006797 1.6e-18 97.1 164 43.9
MD11G1028000 Malus domestica HOM05D006039 ORTHO05D006797 4.7e-18 95.5 150 46.0
CDE06G0903 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 1.1e-17 94.4 122 51.6
Lalb_Chr24g0396971 Lupinus albus HOM05D006039 ORTHO05D006797 1.4e-17 94.0 144 44.4
PGR102G2927 Punica granatum HOM05D006039 ORTHO05D006797 1.4e-17 94.0 160 44.4
Glyma.13G341800 Glycine max HOM05D006039 ORTHO05D006797 1.8e-17 93.6 154 45.5
Ca_01279_v3 Cicer arietinum L. HOM05D006039 ORTHO05D006797 3.1e-17 92.8 164 42.1
Lsat_1_v5_gn_1_67161 Lactuca sativa HOM05D006039 ORTHO05D006797 3.1e-17 92.8 79 64.6
ECA233G1597 Erigeron canadensis HOM05D006039 ORTHO05D006797 4.0e-17 92.4 153 45.8
Medtr2g098330 Medicago truncatula HOM05D006039 ORTHO05D006797 4.0e-17 92.4 160 45.6
HanXRQChr13g0403991 Helianthus annuus HOM05D006039 ORTHO05D006797 8.9e-17 91.3 152 43.4
VMungo1080G1590 Vigna mungo HOM05D006039 ORTHO05D006797 4.4e-16 89.0 162 43.2
Ciclev10014934m.g Citrus clementina HOM05D006039 ORTHO05D006797 5.8e-16 88.6 200 40.0
SGA_v2.0_scaffold247G44833 Striga asiatica HOM05D006039 ORTHO05D006797 7.5e-16 88.2 148 44.6
Thhalv10013519m.g Eutrema salsugineum HOM05D006039 ORTHO05D006797 1.3e-15 87.4 126 44.4
Migut.D00567 Erythranthe guttata HOM05D006039 ORTHO05D006797 2.9e-15 86.3 121 52.1
Sed0010144 Sechium edule HOM05D006039 ORTHO05D006797 2.9e-15 86.3 150 46.0
C02p05800 Brassica napus HOM05D006039 ORTHO05D006797 3.7e-15 85.9 139 43.9
MSTRG.12478 Avicennia marina HOM05D006039 ORTHO05D006797 6.4e-15 85.1 153 43.1
Rhsim01G0190000 Rhododendron simsii HOM05D006039 ORTHO05D006797 1.4e-14 84.0 150 44.7
Haze_23654 Corylus avellana HOM05D006039 ORTHO05D006797 1.9e-14 83.6 94 59.6
Psat5g288280 Pisum sativum HOM05D006039 ORTHO05D006797 1.9e-14 83.6 160 41.9
A02p01580 Brassica napus HOM05D006039 ORTHO05D006797 2.4e-14 83.2 139 44.6
Phvul.L011043 Phaseolus vulgaris HOM05D006039 ORTHO05D006797 3.2e-14 82.8 156 42.3
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 5.4e-14 82.0 159 42.8
BraA02t05138Z Brassica rapa HOM05D006039 ORTHO05D006797 5.4e-14 82.0 125 44.0
FvH4_3g43290 Fragaria vesca HOM05D006039 ORTHO05D006797 5.4e-14 82.0 156 42.3
FAN11G0272 Fragaria x ananassa HOM05D006039 ORTHO05D006797 5.4e-14 82.0 156 42.3
FAN16G1487 Fragaria x ananassa HOM05D006039 ORTHO05D006797 5.4e-14 82.0 156 42.3
FAN21G1726 Fragaria x ananassa HOM05D006039 ORTHO05D006797 5.4e-14 82.0 156 42.3
FAN25G3739 Fragaria x ananassa HOM05D006039 ORTHO05D006797 5.4e-14 82.0 156 42.3
AL6G23500 Arabidopsis lyrata HOM05D006039 ORTHO05D006797 9.2e-14 81.3 143 43.4
Haze_23653 Corylus avellana HOM05D006039 ORTHO05D006797 1.6e-13 80.5 94 59.6
Sp6g31030 Schrenkiella parvula HOM05D006039 ORTHO05D006797 1.6e-13 80.5 125 43.2
CARHR200520 Cardamine hirsuta HOM05D006039 ORTHO05D006797 2.7e-13 79.7 153 41.2
SalBow4G0075 Salvia bowleyana HOM05D006039 ORTHO05D006797 2.7e-13 79.7 155 43.9
SalBow4G2759 Salvia bowleyana HOM05D006039 ORTHO05D006797 2.7e-13 79.7 155 43.9
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 3.5e-13 79.3 156 41.7
ATR0815G050 Amborella trichopoda HOM05D006039 ORTHO05D006797 4.6e-13 79.0 74 66.2
BcaNung01186 Brassica carinata HOM05D006039 ORTHO05D006797 4.6e-13 79.0 155 39.4
BolC2t06525H Brassica oleracea HOM05D006039 ORTHO05D006797 4.6e-13 79.0 155 39.4
THA.LOC104799094 Tarenaya hassleriana HOM05D006039 ORTHO05D006797 4.6e-13 79.0 153 40.5
DCAR_002046 Daucus carota HOM05D006039 ORTHO05D006797 7.8e-13 78.2 179 39.7
AT5G12930 Arabidopsis thaliana HOM05D006039 ORTHO05D006797 2.3e-12 76.6 125 44.8
Os09g0488600 Oryza sativa ssp. japonica HOM05D006039 ORTHO05D006797 6.6e-12 75.1 145 39.3
A03p05700 Brassica napus HOM05D006039 ORTHO05D006797 1.2e-10 70.9 143 40.6
Nn7g36093 Nelumbo nucifera HOM05D006039 ORTHO05D006797 1.2e-10 70.9 159 35.2
BraA03t09909Z Brassica rapa HOM05D006039 ORTHO05D006797 1.6e-10 70.5 143 40.6
Carub.0006s1111 Capsella rubella HOM05D006039 ORTHO05D006797 2.8e-10 69.7 143 39.9
BcaNung03603 Brassica carinata HOM05D006039 ORTHO05D006797 3.6e-10 69.3 157 36.3
Migut.N02301 Erythranthe guttata HOM05D006039 ORTHO05D006797 4.7e-10 68.9 145 43.4
BcaB01g05389 Brassica carinata HOM05D006039 ORTHO05D006797 4.0e-09 65.9 125 43.2
C03p06660 Brassica napus HOM05D006039 ORTHO05D006797 4.0e-09 65.9 125 43.2
BolC3t13172H Brassica oleracea HOM05D006039 ORTHO05D006797 4.0e-09 65.9 155 38.7
HPP92_015767 Vanilla planifolia HOM05D006039 ORTHO05D006797 8.9e-09 64.7 161 37.3
Sabra03G0153000 Salix brachista HOM05D006039 ORTHO05D006797 9.9e-08 61.2 163 35.0
Potri.003G207500 Populus trichocarpa HOM05D006039 ORTHO05D006797 2.9e-07 59.7 153 33.3


User provided reference genes

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