Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07310 Selenicereus undatus HOM05D006337 ORTHO05D008050 0.0e+00 1180.6 608 100.0
Ah.03g134550 Amaranthus hybridus HOM05D006337 ORTHO05D008050 3.7e-202 708.8 594 66.3
AUR62000385 Chenopodium quinoa HOM05D006337 ORTHO05D008050 1.2e-197 693.7 594 66.0
AUR62006741 Chenopodium quinoa HOM05D006337 ORTHO05D008050 2.8e-197 692.6 595 66.4
EL10Ac4g09464 Beta vulgaris HOM05D006337 ORTHO05D008050 2.0e-195 686.4 637 62.0
Sc09g0002620 Simmondsia chinensis HOM05D006337 ORTHO05D008050 3.2e-185 652.5 596 62.6
TAR362G0469 Trochodendron aralioides HOM05D006337 ORTHO05D008050 2.1e-181 639.8 560 63.2
Lj5C328G3 Lonicera japonica HOM05D006337 ORTHO05D008050 4.9e-178 628.6 578 61.2
Dinv30899 Davidia involucrata HOM05D006337 ORTHO05D008050 3.9e-175 619.0 581 60.1
Hma1.2p1_0008F-1.1_g005550 Hydrangea macrophylla HOM05D006337 ORTHO05D008050 3.3e-174 615.9 567 60.8
CSS0010424 Camellia sinensis var. sinensis HOM05D006337 ORTHO05D008050 1.1e-172 610.9 588 59.4
Ciclev10000649m.g Citrus clementina HOM05D006337 ORTHO05D008050 3.4e-171 605.9 564 59.9
Cpa.g.sc48.168 Carica papaya HOM05D006337 ORTHO05D008050 1.7e-170 603.6 531 61.8
CANSAT54G1309 Cannabis sativa HOM05D006337 ORTHO05D008050 6.4e-170 601.7 590 58.0
GSVIVG01031249001 Vitis vinifera HOM05D006337 ORTHO05D008050 1.1e-169 600.9 552 61.2
Prupe.6G312300 Prunus persica HOM05D006337 ORTHO05D008050 4.6e-168 595.5 583 57.8
Gohir.D13G115300 Gossypium hirsutum HOM05D006337 ORTHO05D008050 6.0e-168 595.1 556 59.9
SalBow7G2322 Salvia bowleyana HOM05D006337 ORTHO05D008050 6.0e-168 595.1 558 60.2
Gorai.013G129700 Gossypium raimondii HOM05D006337 ORTHO05D008050 7.8e-168 594.7 556 59.7
MD04G1193000 Malus domestica HOM05D006337 ORTHO05D008050 7.8e-168 594.7 596 57.2
Atru.chr2.356 Acer truncatum HOM05D006337 ORTHO05D008050 1.0e-167 594.3 577 58.8
Nitab4.5_0001338g0110 Nicotiana tabacum HOM05D006337 ORTHO05D008050 1.0e-167 594.3 550 61.8
Potri.005G012900 Populus trichocarpa HOM05D006337 ORTHO05D008050 1.0e-167 594.3 562 59.6
Migut.B00957 Erythranthe guttata HOM05D006337 ORTHO05D008050 5.1e-167 592.0 579 58.7
MD12G1205200 Malus domestica HOM05D006337 ORTHO05D008050 1.5e-166 590.5 594 57.2
Nn3g21731 Nelumbo nucifera HOM05D006337 ORTHO05D008050 1.6e-165 587.0 558 59.5
PGR083G2894 Punica granatum HOM05D006337 ORTHO05D008050 8.1e-165 584.7 555 60.4
Peaxi162Scf01061g00122 Petunia axillaris HOM05D006337 ORTHO05D008050 2.4e-164 583.2 529 62.0
PGSC0003DMG400002762 Solanum tuberosum HOM05D006337 ORTHO05D008050 5.2e-164 582.0 530 62.1
MELO3C004177.2 Cucumis melo HOM05D006337 ORTHO05D008050 8.9e-164 581.3 564 58.3
Gohir.A13G112400 Gossypium hirsutum HOM05D006337 ORTHO05D008050 8.9e-164 581.3 556 59.4
ClCG02G014850 Citrullus lanatus HOM05D006337 ORTHO05D008050 1.5e-163 580.5 600 56.7
Manes.08G110700 Manihot esculenta HOM05D006337 ORTHO05D008050 2.6e-163 579.7 552 58.7
CAN.G1076.22 Capsicum annuum HOM05D006337 ORTHO05D008050 7.6e-163 578.2 584 58.0
Eucgr.L00261 Eucalyptus grandis HOM05D006337 ORTHO05D008050 7.6e-163 578.2 576 57.3
TWI56G1055 Tripterygium wilfordii HOM05D006337 ORTHO05D008050 1.3e-162 577.4 556 58.8
PSO761G0398 Papaver somniferum HOM05D006337 ORTHO05D008050 2.2e-162 576.6 532 61.1
QL03p014086 Quercus lobata HOM05D006337 ORTHO05D008050 2.9e-162 576.2 579 56.6
CsaV3_2G007160 Cucumis sativus L. HOM05D006337 ORTHO05D008050 3.8e-162 575.9 562 58.2
Sopen01g044110 Solanum pennellii HOM05D006337 ORTHO05D008050 4.9e-162 575.5 530 61.5
MBI19_g03243_MAGBIO Magnolia biondii HOM05D006337 ORTHO05D008050 6.4e-162 575.1 532 60.3
FvH4_6g07510 Fragaria vesca HOM05D006337 ORTHO05D008050 1.1e-161 574.3 553 58.6
FAN14G3073 Fragaria x ananassa HOM05D006337 ORTHO05D008050 1.1e-161 574.3 553 58.6
Gohir.A08G205300 Gossypium hirsutum HOM05D006337 ORTHO05D008050 1.1e-161 574.3 564 57.4
Lsat_1_v5_gn_8_116121 Lactuca sativa HOM05D006337 ORTHO05D008050 1.9e-161 573.5 548 58.9
Solyc01g100610.3 Solanum lycopersicum HOM05D006337 ORTHO05D008050 1.9e-161 573.5 530 61.3
PSO210G5840 Papaver somniferum HOM05D006337 ORTHO05D008050 4.1e-161 572.4 532 60.7
Cc02_g35170 Coffea canephora HOM05D006337 ORTHO05D008050 5.4e-161 572.0 590 57.1
Gorai.004G236200 Gossypium raimondii HOM05D006337 ORTHO05D008050 5.4e-161 572.0 564 57.1
Nn4g25566 Nelumbo nucifera HOM05D006337 ORTHO05D008050 9.2e-161 571.2 552 58.7
Glyma.10G146600 Glycine max HOM05D006337 ORTHO05D008050 3.5e-160 569.3 554 57.4
SalBow3G0030 Salvia bowleyana HOM05D006337 ORTHO05D008050 3.5e-160 569.3 559 59.2
FAN02G2852 Fragaria x ananassa HOM05D006337 ORTHO05D008050 4.6e-160 568.9 553 58.0
THA.LOC104802775 Tarenaya hassleriana HOM05D006337 ORTHO05D008050 4.6e-160 568.9 565 57.7
Gohir.D08G222400 Gossypium hirsutum HOM05D006337 ORTHO05D008050 6.0e-160 568.5 564 57.1
arahy.Tifrunner.gnm1.ann1.JG44AF Arachis hypogaea HOM05D006337 ORTHO05D008050 7.8e-160 568.2 569 57.5
FAN09G0993 Fragaria x ananassa HOM05D006337 ORTHO05D008050 1.3e-159 567.4 553 58.4
Sed0024424 Sechium edule HOM05D006337 ORTHO05D008050 1.7e-159 567.0 593 56.0
arahy.Tifrunner.gnm1.ann1.T92ZT6 Arachis hypogaea HOM05D006337 ORTHO05D008050 3.0e-159 566.2 569 57.3
RcHm_v2.0_Chr3g0457221 Rosa chinensis HOM05D006337 ORTHO05D008050 3.9e-159 565.8 524 59.7
Haze_04055 Corylus avellana HOM05D006337 ORTHO05D008050 5.1e-159 565.5 555 57.5
Thecc.05G323900 Theobroma cacao HOM05D006337 ORTHO05D008050 3.3e-158 562.8 569 56.6
Sed0025162 Sechium edule HOM05D006337 ORTHO05D008050 4.3e-158 562.4 539 57.5
ECA232G4422 Erigeron canadensis HOM05D006337 ORTHO05D008050 7.3e-158 561.6 531 59.3
Nitab4.5_0004525g0030 Nicotiana tabacum HOM05D006337 ORTHO05D008050 7.3e-158 561.6 560 59.1
SGA_v2.0_scaffold4G01972 Striga asiatica HOM05D006337 ORTHO05D008050 9.6e-158 561.2 561 57.0
COL.COLO4_05544 Corchorus olitorius HOM05D006337 ORTHO05D008050 1.2e-157 560.8 594 55.9
Sp2g21170 Schrenkiella parvula HOM05D006337 ORTHO05D008050 8.1e-157 558.1 558 57.7
THA.LOC104821740 Tarenaya hassleriana HOM05D006337 ORTHO05D008050 8.1e-157 558.1 582 55.8
Aqoxy5G02944 Aquilegia oxysepala HOM05D006337 ORTHO05D008050 1.4e-156 557.4 538 58.6
DCAR_005423 Daucus carota HOM05D006337 ORTHO05D008050 6.9e-156 555.1 543 57.8
Lj5g0023698 Lotus japonicus HOM05D006337 ORTHO05D008050 1.2e-155 554.3 579 55.6
HanXRQChr09g0258701 Helianthus annuus HOM05D006337 ORTHO05D008050 2.6e-155 553.1 577 56.2
Phvul.007G201800 Phaseolus vulgaris HOM05D006337 ORTHO05D008050 3.4e-155 552.7 565 55.8
Lalb_Chr06g0167461 Lupinus albus HOM05D006337 ORTHO05D008050 4.4e-155 552.4 562 55.9
Sabra05G0020500 Salix brachista HOM05D006337 ORTHO05D008050 5.8e-155 552.0 618 53.4
Ca_10177_v3 Cicer arietinum L. HOM05D006337 ORTHO05D008050 7.6e-155 551.6 563 56.3
Sabra05G0009100 Salix brachista HOM05D006337 ORTHO05D008050 1.3e-154 550.8 609 53.7
ATR0693G447 Amborella trichopoda HOM05D006337 ORTHO05D008050 2.2e-154 550.1 555 56.4
Thhalv10003867m.g Eutrema salsugineum HOM05D006337 ORTHO05D008050 2.9e-154 549.7 585 55.4
VMungo0720G2751 Vigna mungo HOM05D006337 ORTHO05D008050 2.9e-154 549.7 553 55.9
HanXRQChr15g0486571 Helianthus annuus HOM05D006337 ORTHO05D008050 4.2e-153 545.8 531 58.6
Oeu052934.2 Olea europaea HOM05D006337 ORTHO05D008050 4.2e-153 545.8 464 65.3
A02p39000 Brassica napus HOM05D006337 ORTHO05D008050 7.8e-152 541.6 588 55.1
AL6G38700 Arabidopsis lyrata HOM05D006337 ORTHO05D008050 1.7e-151 540.4 530 57.5
BraA02t08870Z Brassica rapa HOM05D006337 ORTHO05D008050 2.3e-151 540.0 588 54.8
BcaC03g17830 Brassica carinata HOM05D006337 ORTHO05D008050 5.1e-151 538.9 588 54.6
CARHR186710 Cardamine hirsuta HOM05D006337 ORTHO05D008050 5.1e-151 538.9 589 54.2
BolC2t11920H Brassica oleracea HOM05D006337 ORTHO05D008050 6.6e-151 538.5 588 54.8
Psat6g152760 Pisum sativum HOM05D006337 ORTHO05D008050 8.7e-151 538.1 569 55.7
SGA_v2.0_scaffold5G02894 Striga asiatica HOM05D006337 ORTHO05D008050 1.5e-150 537.3 546 56.6
AT5G26820 Arabidopsis thaliana HOM05D006337 ORTHO05D008050 2.5e-150 536.6 559 56.2
Rhsim11G0096400 Rhododendron simsii HOM05D006337 ORTHO05D008050 5.6e-150 535.4 591 54.8
C02p58590 Brassica napus HOM05D006337 ORTHO05D008050 9.6e-150 534.6 588 54.3
BcaNung06218 Brassica carinata HOM05D006337 ORTHO05D008050 2.1e-149 533.5 587 54.3
TPR.G2638 Trifolium pratense HOM05D006337 ORTHO05D008050 2.4e-148 530.0 537 57.2
unitig_8.g4946 Utricularia gibba HOM05D006337 ORTHO05D008050 2.0e-147 526.9 583 54.0
Carub.0006s2448 Capsella rubella HOM05D006337 ORTHO05D008050 3.4e-147 526.2 565 55.6
Medtr1g084140 Medicago truncatula HOM05D006337 ORTHO05D008050 5.8e-147 525.4 562 55.7
Actinidia35517 Actinidia chinensis HOM05D006337 ORTHO05D008050 1.8e-140 503.8 557 53.3
SEGI_32498 Sequoiadendron giganteum HOM05D006337 ORTHO05D008050 8.7e-127 458.4 534 50.9
Os12g0562100 Oryza sativa ssp. japonica HOM05D006337 ORTHO05D008050 2.9e-122 443.4 565 46.7
HPP92_010606 Vanilla planifolia HOM05D006337 ORTHO05D008050 1.1e-121 441.4 544 47.8
Dinv24464 Davidia involucrata HOM05D006337 ORTHO05D008050 1.5e-107 394.4 375 60.0
CiPaw.07G030200 Carya illinoinensis HOM05D006337 ORTHO05D008050 2.6e-107 393.7 309 70.2
CDE02G2949 Ceratophyllum demersum HOM05D006337 ORTHO05D008050 1.0e-106 391.7 450 51.3
AagrBONN_evm.TU.Sc2ySwM_368.2655 Anthoceros agrestis HOM05D006337 ORTHO05D008050 4.5e-99 366.3 472 46.8
Pp3c25_630 Physcomitrium patens HOM05D006337 ORTHO05D008050 2.9e-98 363.6 477 44.7
Pp3c5_21200 Physcomitrium patens HOM05D006337 ORTHO05D008050 2.6e-94 350.5 495 44.0
SMO118G0422 Selaginella moellendorffii HOM05D006337 ORTHO05D008050 4.1e-92 343.2 455 44.8
Mapoly0001s0146 Marchantia polymorpha HOM05D006337 ORTHO05D008050 1.4e-87 328.2 521 40.1
Zm00001eb028490 Zea mays HOM05D006337 ORTHO05D008050 7.0e-84 315.8 307 56.4
Pp3c25_1200 Physcomitrium patens HOM05D006337 ORTHO05D008050 6.1e-80 302.8 457 41.6
Aa31LG11G9810 Aethionema arabicum HOM05D006337 ORTHO05D008050 8.9e-71 272.3 338 49.4
CDE09G1129 Ceratophyllum demersum HOM05D006337 ORTHO05D008050 8.0e-64 249.2 355 43.7
vmacro01570 Vaccinium macrocarpon HOM05D006337 ORTHO05D008050 5.4e-44 183.3 203 55.2
CBR_g24322 Chara braunii HOM05D006337 ORTHO05D008050 1.2e-38 165.6 252 41.7
Zm00001eb354930 Zea mays HOM05D006337 ORTHO05D008050 4.4e-38 163.7 184 50.5
CDE09G1014 Ceratophyllum demersum HOM05D000041 ORTHO05D000061 2.9e-37 161.0 144 63.2
TWI12G0276 Tripterygium wilfordii HOM05D006337 ORTHO05D008050 2.4e-31 141.4 174 48.3
Lalb_Chr02g0147771 Lupinus albus HOM05D006337 ORTHO05D008050 1.9e-17 95.1 107 52.3
Os05g0131500 Oryza sativa ssp. japonica HOM05D006337 ORTHO05D008050 9.6e-17 92.8 270 33.0
Os06g0560000 Oryza sativa ssp. japonica HOM05D004253 ORTHO05D005013 4.6e-11 73.9 315 27.0
Cc00_g33920 Coffea canephora HOM05D004253 ORTHO05D005013 7.9e-11 73.2 351 26.5
Zm00001eb384340 Zea mays HOM05D004253 ORTHO05D005013 7.9e-11 73.2 483 24.4
Mapoly0049s0027 Marchantia polymorpha HOM05D004253 ORTHO05D005013 2.3e-10 71.6 376 26.3
SMO118G0042 Selaginella moellendorffii HOM05D004253 ORTHO05D005013 2.3e-10 71.6 369 26.0
Pp3c20_5190 Physcomitrium patens HOM05D004253 ORTHO05D005013 3.0e-10 71.2 369 23.6
Cc06_g00690 Coffea canephora HOM05D004253 ORTHO05D005013 1.9e-09 68.6 335 26.3
Glyma.20G096402 Glycine max HOM05D006337 ORTHO05D008050 2.5e-09 68.2 38 76.3
SMO115G0243 Selaginella moellendorffii HOM05D004253 ORTHO05D005013 9.7e-09 66.2 401 23.4
Sopen10g027900 Solanum pennellii HOM05D004253 ORTHO05D005013 2.8e-08 64.7 326 24.5
GSVIVG01030252001 Vitis vinifera HOM05D004253 ORTHO05D005013 6.3e-08 63.5 321 23.7
Solyc10g076280.3 Solanum lycopersicum HOM05D004253 ORTHO05D005013 1.1e-07 62.8 326 24.5
GSVIVG01030250001 Vitis vinifera HOM05D004253 ORTHO05D005013 1.4e-07 62.4 328 24.4
PGSC0003DMG400011865 Solanum tuberosum HOM05D004253 ORTHO05D005013 4.1e-07 60.8 326 24.5
TAR633G0963 Trochodendron aralioides HOM05D004253 ORTHO05D005013 4.1e-07 60.8 327 24.8
CAN.G955.1 Capsicum annuum HOM05D004253 ORTHO05D005013 6.9e-07 60.1 382 24.1
CSS0016892 Camellia sinensis var. sinensis HOM05D004253 ORTHO05D005013 9.0e-07 59.7 323 24.5
Dinv25280 Davidia involucrata HOM05D004253 ORTHO05D005013 1.2e-06 59.3 343 24.2
Aqoxy4G02184 Aquilegia oxysepala HOM05D004253 ORTHO05D005013 1.5e-06 58.9 330 23.9
Gohir.A01G170500 Gossypium hirsutum HOM05D004253 ORTHO05D005013 2.0e-06 58.5 393 23.4
Gorai.002G200200 Gossypium raimondii HOM05D004253 ORTHO05D005013 2.0e-06 58.5 393 23.4
EL10Ac7g16784 Beta vulgaris HOM05D004253 ORTHO05D005013 3.4e-06 57.8 347 23.3
EL10Ac7g17016 Beta vulgaris HOM05D004253 ORTHO05D005013 3.4e-06 57.8 321 25.2
EL10As8g23831 Beta vulgaris HOM05D004253 ORTHO05D005013 3.4e-06 57.8 347 23.3
AagrBONN_evm.TU.Sc2ySwM_344.1348 Anthoceros agrestis HOM05D004253 ORTHO05D005013 4.5e-06 57.4 384 25.5
HanXRQChr15g0463391 Helianthus annuus HOM05D004253 ORTHO05D005013 4.5e-06 57.4 322 24.5
CSS0015068 Camellia sinensis var. sinensis HOM05D004253 ORTHO05D005013 7.7e-06 56.6 334 22.2
Gohir.D01G161500 Gossypium hirsutum HOM05D004253 ORTHO05D005013 7.7e-06 56.6 393 23.2
unitig_8.g4466 Utricularia gibba HOM05D004253 ORTHO05D005013 7.7e-06 56.6 200 26.0


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