Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 3.4e-112 408.3 198 100.0
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 8.4e-87 323.9 199 76.9
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.2e-85 320.1 198 75.3
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.6e-85 319.7 198 75.8
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 3.8e-79 298.5 196 68.9
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 3.0e-76 288.9 198 68.7
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 3.9e-76 288.5 198 66.7
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 5.1e-76 288.1 198 69.2
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 6.6e-76 287.7 203 68.0
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 1.9e-75 286.2 196 67.3
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 1.9e-75 286.2 205 67.8
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 2.5e-75 285.8 196 67.3
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 7.3e-75 284.3 198 67.7
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 7.3e-75 284.3 198 67.7
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 1.3e-74 283.5 198 67.7
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 1.6e-74 283.1 198 68.2
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 6.2e-74 281.2 211 64.5
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 6.2e-74 281.2 198 67.2
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 8.1e-74 280.8 198 67.2
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 1.1e-73 280.4 203 67.0
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 1.4e-73 280.0 206 65.0
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 1.4e-73 280.0 198 67.2
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.4e-73 280.0 198 67.2
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 6.9e-73 277.7 198 68.2
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.2e-72 276.9 204 64.2
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 1.5e-72 276.6 203 66.0
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.4e-72 275.4 182 69.8
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 5.8e-72 274.6 198 64.6
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 1.7e-71 273.1 199 67.8
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 2.2e-71 272.7 200 66.0
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 2.2e-71 272.7 236 56.4
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 2.2e-71 272.7 201 66.7
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 2.9e-71 272.3 200 64.0
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 4.9e-71 271.6 205 62.0
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 8.4e-71 270.8 199 64.8
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 1.1e-70 270.4 211 63.0
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 1.1e-70 270.4 198 63.6
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 1.1e-70 270.4 202 65.8
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 4.2e-70 268.5 196 64.8
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 4.2e-70 268.5 199 65.3
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 5.5e-70 268.1 213 63.8
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 7.1e-70 267.7 202 65.3
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 7.1e-70 267.7 198 65.7
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 1.6e-69 266.5 199 64.3
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 2.7e-69 265.8 198 64.6
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 4.6e-69 265.0 199 62.8
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 6.0e-69 264.6 196 65.3
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 7.9e-69 264.2 200 65.5
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 7.9e-69 264.2 196 62.8
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 1.3e-68 263.5 219 59.4
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 3.0e-68 262.3 198 64.1
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 3.0e-68 262.3 206 60.7
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 3.0e-68 262.3 199 63.8
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 3.0e-68 262.3 199 64.8
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 5.1e-68 261.5 200 65.0
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 8.7e-68 260.8 198 63.6
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 8.7e-68 260.8 198 62.6
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 8.7e-68 260.8 203 62.6
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 8.7e-68 260.8 199 63.3
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 1.1e-67 260.4 198 62.1
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 1.1e-67 260.4 199 64.3
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 1.9e-67 259.6 198 62.6
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 3.3e-67 258.8 199 64.3
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 5.6e-67 258.1 198 62.6
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 1.6e-66 256.5 199 61.8
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 1.6e-66 256.5 199 61.8
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 2.1e-66 256.1 198 63.6
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 3.7e-66 255.4 196 59.7
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 6.2e-66 254.6 177 66.1
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 6.2e-66 254.6 198 61.1
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 1.8e-65 253.1 201 60.7
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 3.1e-65 252.3 203 60.6
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.5e-64 250.0 191 62.8
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 1.5e-64 250.0 200 60.0
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 1.5e-64 250.0 196 60.7
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 2.0e-64 249.6 198 60.6
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 4.5e-64 248.4 199 61.8
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 3.8e-63 245.4 226 54.4
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 6.5e-63 244.6 199 59.8
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 6.5e-63 244.6 196 59.7
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 5.5e-62 241.5 189 59.8
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 2.1e-58 229.6 203 56.7
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 3.7e-58 228.8 195 53.8
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 4.6e-53 211.8 170 57.6
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.3e-52 210.3 217 53.9
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 5.1e-52 208.4 138 65.9
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 2.5e-51 206.1 141 67.4
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 3.3e-51 205.7 165 56.4
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 1.2e-48 197.2 201 50.7
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 1.1e-46 190.7 164 57.3
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 1.1e-46 190.7 148 59.5
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 2.7e-45 186.0 148 62.8
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 8.2e-42 174.5 195 51.3
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 5.5e-38 161.8 165 50.3
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 5.1e-36 155.2 126 60.3
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 6.7e-36 154.8 168 49.4
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.3e-34 150.6 119 58.0
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 1.9e-30 136.7 106 62.3
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 4.8e-26 122.1 115 51.3
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 3.5e-24 115.9 69 72.5
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 7.7e-24 114.8 165 34.5
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 1.7e-23 113.6 200 33.5
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 2.5e-22 109.8 101 55.4
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 3.2e-22 109.4 162 42.0
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 5.5e-22 108.6 86 61.6
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 5.7e-19 98.6 56 80.4
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 8.3e-18 94.7 72 61.1
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 2.7e-16 89.7 86 54.7
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 4.2e-14 82.4 49 69.4
Cre11.g467752 Chlamydomonas reinhardtii HOM05D006529 ORTHO05D008380 2.2e-10 70.1 202 28.2
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 1.4e-09 67.4 58 58.6
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 7.0e-09 65.1 72 45.8
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 1.0e-07 61.2 45 60.0
Glyma.05G224100 Glycine max HOM05D006529 ORTHO05D008380 1.3e-07 60.8 31 77.4
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 1.7e-07 60.5 59 49.2
EL10Ac4g09574 Beta vulgaris HOM05D006529 ORTHO05D008380 5.0e-07 58.9 131 35.1
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 5.0e-07 58.9 34 73.5
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 1.1e-06 57.8 100 40.0


User provided reference genes

Program Settings