Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 1.5e-59 232.6 118 100.0
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 3.3e-30 135.2 115 58.3
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 2.9e-26 122.1 118 53.4
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 4.9e-26 121.3 96 65.6
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 4.9e-26 121.3 96 65.6
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 6.4e-26 120.9 115 53.0
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 2.4e-25 119.0 97 61.9
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 7.1e-25 117.5 90 65.6
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 9.3e-25 117.1 98 57.1
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 1.6e-24 116.3 115 51.3
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 2.7e-24 115.5 98 57.1
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 4.6e-24 114.8 126 50.0
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 6.0e-24 114.4 86 67.4
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 7.8e-24 114.0 98 56.1
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 3.0e-23 112.1 85 63.5
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 6.6e-23 110.9 85 61.2
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 6.6e-23 110.9 85 62.4
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 6.6e-23 110.9 95 54.7
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 8.7e-23 110.5 107 53.3
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 1.1e-22 110.2 110 50.9
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 1.5e-22 109.8 94 62.8
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 1.9e-22 109.4 89 56.2
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 2.5e-22 109.0 102 52.9
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 2.5e-22 109.0 108 51.9
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 3.3e-22 108.6 109 50.5
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 3.3e-22 108.6 107 52.3
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 3.3e-22 108.6 87 63.2
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 5.6e-22 107.8 118 49.2
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 9.6e-22 107.1 91 62.6
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 1.3e-21 106.7 117 49.6
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 1.6e-21 106.3 98 53.1
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 2.1e-21 105.9 119 49.6
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 2.1e-21 105.9 114 48.2
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 2.8e-21 105.5 104 50.0
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 2.8e-21 105.5 107 50.5
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 2.8e-21 105.5 106 50.0
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 4.8e-21 104.8 119 49.6
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 6.2e-21 104.4 85 58.8
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 8.1e-21 104.0 100 57.0
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 8.1e-21 104.0 78 61.5
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 8.1e-21 104.0 78 61.5
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 8.1e-21 104.0 105 55.2
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 1.1e-20 103.6 86 59.3
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 1.1e-20 103.6 96 55.2
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 1.8e-20 102.8 100 52.0
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 1.8e-20 102.8 96 55.2
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 2.4e-20 102.4 119 50.4
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 2.4e-20 102.4 99 57.6
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 2.4e-20 102.4 93 52.7
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 3.1e-20 102.1 87 58.6
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 3.1e-20 102.1 86 55.8
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 4.0e-20 101.7 86 51.2
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 5.3e-20 101.3 90 55.6
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 1.2e-19 100.1 90 60.0
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 1.2e-19 100.1 112 46.4
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 1.2e-19 100.1 78 61.5
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 1.2e-19 100.1 105 51.4
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 1.5e-19 99.8 91 56.0
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 2.0e-19 99.4 112 48.2
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 2.0e-19 99.4 112 48.2
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 2.0e-19 99.4 102 46.1
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 3.4e-19 98.6 95 54.7
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 4.5e-19 98.2 94 47.9
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 5.8e-19 97.8 95 56.8
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 1.3e-18 96.7 80 65.0
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 1.3e-18 96.7 102 53.9
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 1.3e-18 96.7 118 41.5
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 1.7e-18 96.3 74 62.2
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.7e-18 96.3 86 53.5
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 2.2e-18 95.9 90 52.2
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 2.2e-18 95.9 86 53.5
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 3.8e-18 95.1 85 55.3
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 3.8e-18 95.1 115 42.6
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 4.9e-18 94.7 111 44.1
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 4.9e-18 94.7 111 44.1
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 6.4e-18 94.4 85 54.1
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 2.4e-17 92.4 87 56.3
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 2.4e-17 92.4 100 47.0
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 2.4e-17 92.4 85 49.4
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 3.2e-17 92.0 81 59.3
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 7.1e-17 90.9 85 48.2
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 7.1e-17 90.9 89 55.1
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 9.3e-17 90.5 89 57.3
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 1.6e-16 89.7 69 56.5
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 2.7e-16 89.0 100 48.0
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 3.0e-15 85.5 56 69.6
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 3.0e-15 85.5 56 69.6
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 3.0e-15 85.5 47 80.9
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 1.5e-14 83.2 105 46.7
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 2.5e-14 82.4 55 69.1
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 3.3e-14 82.0 65 52.3
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 2.4e-12 75.9 52 63.5
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 5.5e-09 64.7 89 38.2
AagrBONN_evm.TU.Sc2ySwM_228.2308 Anthoceros agrestis HOM05D007659 ORTHO05D009227 1.6e-08 63.2 87 35.6
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 2.1e-08 62.8 82 41.5
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 3.9e-07 58.5 89 37.1


User provided reference genes

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