Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07189 Selenicereus undatus HOM05D004640 ORTHO05D005489 5.7e-308 1060.1 531 100.0
Hund21765 Selenicereus undatus HOM05D004640 ORTHO05D005489 1.4e-192 676.8 678 58.0
EL10Ac4g09724 Beta vulgaris HOM05D004640 ORTHO05D005489 7.0e-181 637.9 682 55.3
AUR62006957 Chenopodium quinoa HOM05D004640 ORTHO05D005489 1.3e-179 633.6 678 55.2
AUR62000605 Chenopodium quinoa HOM05D004640 ORTHO05D005489 2.2e-174 616.3 671 54.2
Sc09g0001940 Simmondsia chinensis HOM05D004640 ORTHO05D005489 1.4e-165 587.0 677 52.9
CiPaw.05G048700 Carya illinoinensis HOM05D004640 ORTHO05D005489 5.1e-147 525.4 681 47.9
TWI14G1252 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 6.9e-144 515.0 677 48.0
QL02p099200 Quercus lobata HOM05D004640 ORTHO05D005489 4.5e-143 512.3 662 47.9
Manes.10G125900 Manihot esculenta HOM05D004640 ORTHO05D005489 8.4e-142 508.1 676 47.2
Potri.001G211700 Populus trichocarpa HOM05D004640 ORTHO05D005489 1.1e-141 507.7 696 47.1
Glyma.15G045900 Glycine max HOM05D004640 ORTHO05D005489 5.4e-141 505.4 669 48.1
Gohir.A04G121200 Gossypium hirsutum HOM05D004640 ORTHO05D005489 6.0e-140 501.9 675 47.4
Duzib132G0532 Durio zibethinus HOM05D004640 ORTHO05D005489 3.0e-139 499.6 682 47.1
Ca_00068_v3 Cicer arietinum L. HOM05D004640 ORTHO05D005489 5.1e-139 498.8 667 48.1
Actinidia19942 Actinidia chinensis HOM05D004640 ORTHO05D005489 1.5e-138 497.3 673 48.7
Thecc.02G088200 Theobroma cacao HOM05D004640 ORTHO05D005489 3.3e-138 496.1 682 47.1
Hma1.2p1_0296F.1_g116830 Hydrangea macrophylla HOM05D004640 ORTHO05D005489 7.4e-138 495.0 676 47.0
VMungo0540G1095 Vigna mungo HOM05D004640 ORTHO05D005489 7.4e-138 495.0 672 47.2
Atru.chr6.619 Acer truncatum HOM05D004640 ORTHO05D005489 4.8e-137 492.3 680 48.1
Atru.chr6.621_Atru.chr6.622 Acer truncatum HOM05D004640 ORTHO05D005489 4.8e-137 492.3 680 48.1
Ciclev10000505m.g Citrus clementina HOM05D004640 ORTHO05D005489 6.2e-137 491.9 686 45.9
ClCG05G009610 Citrullus lanatus HOM05D004640 ORTHO05D005489 8.1e-137 491.5 612 51.1
Glyma.08G187100 Glycine max HOM05D004640 ORTHO05D005489 1.4e-136 490.7 684 46.9
Gorai.012G151900 Gossypium raimondii HOM05D004640 ORTHO05D005489 2.4e-136 490.0 702 45.6
RcHm_v2.0_Chr1g0332251 Rosa chinensis HOM05D004640 ORTHO05D005489 1.5e-135 487.3 673 48.0
CSS0031954 Camellia sinensis var. sinensis HOM05D004640 ORTHO05D005489 2.6e-135 486.5 678 47.3
Peaxi162Scf00577g00411 Petunia axillaris HOM05D004640 ORTHO05D005489 3.4e-135 486.1 594 50.5
Eucgr.I02737 Eucalyptus grandis HOM05D004640 ORTHO05D005489 5.8e-135 485.3 677 45.6
CSS0010715 Camellia sinensis var. sinensis HOM05D004640 ORTHO05D005489 1.7e-134 483.8 678 47.3
TPR.G2079 Trifolium pratense HOM05D004640 ORTHO05D005489 2.2e-134 483.4 684 46.5
arahy.Tifrunner.gnm1.ann1.8G9BB5 Arachis hypogaea HOM05D004640 ORTHO05D005489 1.1e-133 481.1 675 46.4
TWI59G0201 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 5.5e-133 478.8 646 47.1
Rhsim05G0203300 Rhododendron simsii HOM05D004640 ORTHO05D005489 7.1e-133 478.4 668 47.5
MSTRG.23232 Avicennia marina HOM05D004640 ORTHO05D005489 1.2e-132 477.6 671 45.8
PGR142G2697 Punica granatum HOM05D004640 ORTHO05D005489 2.7e-132 476.5 671 45.9
Sabra01G0163500 Salix brachista HOM05D004640 ORTHO05D005489 4.6e-132 475.7 679 46.2
Lj6g0021650 Lotus japonicus HOM05D004640 ORTHO05D005489 1.3e-131 474.2 678 45.3
Cc09_g07620 Coffea canephora HOM05D004640 ORTHO05D005489 1.5e-130 470.7 679 45.5
Medtr2g006880 Medicago truncatula HOM05D004640 ORTHO05D005489 1.9e-130 470.3 683 46.0
FAN08G0534 Fragaria x ananassa HOM05D004640 ORTHO05D005489 7.4e-130 468.4 669 47.1
FvH4_5g29191 Fragaria vesca HOM05D004640 ORTHO05D005489 2.1e-129 466.8 672 46.4
CANSAT11G0894 Cannabis sativa HOM05D004640 ORTHO05D005489 3.7e-129 466.1 671 46.8
Gorai.002G006000 Gossypium raimondii HOM05D004640 ORTHO05D005489 2.0e-127 460.3 688 43.9
arahy.Tifrunner.gnm1.ann1.Y1PSG0 Arachis hypogaea HOM05D004640 ORTHO05D005489 5.8e-127 458.8 734 42.8
CsaV3_3G019120 Cucumis sativus L. HOM05D004640 ORTHO05D005489 2.2e-126 456.8 681 45.1
Dinv24776 Davidia involucrata HOM05D004640 ORTHO05D005489 1.2e-124 451.1 625 46.6
Lsat_1_v5_gn_5_71601 Lactuca sativa HOM05D004640 ORTHO05D005489 1.2e-124 451.1 678 45.4
Aqoxy1G01535 Aquilegia oxysepala HOM05D004640 ORTHO05D005489 1.6e-124 450.7 668 44.5
Gohir.D01G005100 Gossypium hirsutum HOM05D004640 ORTHO05D005489 1.3e-123 447.6 678 43.7
Prupe.1G004500 Prunus persica HOM05D004640 ORTHO05D005489 2.3e-123 446.8 656 46.0
vmacro12737 Vaccinium macrocarpon HOM05D004640 ORTHO05D005489 3.0e-123 446.4 795 40.6
Migut.H02548 Erythranthe guttata HOM05D004640 ORTHO05D005489 3.7e-121 439.5 671 45.8
COL.COLO4_11782 Corchorus olitorius HOM05D004640 ORTHO05D005489 1.4e-120 437.6 639 45.5
MD15G1426300 Malus domestica HOM05D004640 ORTHO05D005489 4.1e-120 436.0 654 45.6
TWI23G1121 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 6.9e-120 435.3 619 44.3
PSO541G2962 Papaver somniferum HOM05D004640 ORTHO05D005489 4.5e-119 432.6 690 42.6
Phvul.006G215300 Phaseolus vulgaris HOM05D004640 ORTHO05D005489 4.5e-119 432.6 624 45.0
MELO3C019462.2 Cucumis melo HOM05D004640 ORTHO05D005489 3.8e-118 429.5 664 44.3
Solyc04g026280.2 Solanum lycopersicum HOM05D004640 ORTHO05D005489 1.1e-117 427.9 643 44.8
PSO675G0104 Papaver somniferum HOM05D004640 ORTHO05D005489 1.6e-116 424.1 681 42.4
FAN04G1948 Fragaria x ananassa HOM05D004640 ORTHO05D005489 2.1e-116 423.7 548 49.6
Nitab4.5_0001785g0050 Nicotiana tabacum HOM05D004640 ORTHO05D005489 1.3e-115 421.0 731 40.2
MD08G1235100 Malus domestica HOM05D004640 ORTHO05D005489 5.1e-115 419.1 652 44.9
Gohir.A01G005001 Gossypium hirsutum HOM05D004640 ORTHO05D005489 6.7e-115 418.7 642 43.1
Sopen04g014430 Solanum pennellii HOM05D004640 ORTHO05D005489 8.7e-115 418.3 663 43.6
FAN18G0226 Fragaria x ananassa HOM05D004640 ORTHO05D005489 4.8e-113 412.5 612 45.6
Nitab4.5_0004809g0070 Nicotiana tabacum HOM05D004640 ORTHO05D005489 8.2e-113 411.8 478 52.1
Lalb_Chr20g0123511 Lupinus albus HOM05D004640 ORTHO05D005489 1.1e-112 411.4 615 44.6
Thhalv10023347m.g Eutrema salsugineum HOM05D004640 ORTHO05D005489 4.1e-112 409.5 664 42.9
Sed0025782 Sechium edule HOM05D004640 ORTHO05D005489 5.9e-111 405.6 555 47.4
ECA233G0813 Erigeron canadensis HOM05D004640 ORTHO05D005489 1.0e-110 404.8 648 42.9
Psat1g221200 Pisum sativum HOM05D004640 ORTHO05D005489 1.7e-110 404.1 617 43.8
Carub.0002s0421 Capsella rubella HOM05D004640 ORTHO05D005489 1.1e-109 401.4 647 43.1
FAN13G0955 Fragaria x ananassa HOM05D004640 ORTHO05D005489 2.5e-109 400.2 603 45.1
AL2G15460 Arabidopsis lyrata HOM05D004640 ORTHO05D005489 1.6e-108 397.5 660 42.1
BcaB04g20302 Brassica carinata HOM05D004640 ORTHO05D005489 1.8e-107 394.0 664 42.2
A01p29810 Brassica napus HOM05D004640 ORTHO05D005489 2.3e-107 393.7 660 42.1
BraA01t03109Z Brassica rapa HOM05D004640 ORTHO05D005489 2.3e-107 393.7 660 42.1
THA.LOC104809619 Tarenaya hassleriana HOM05D004640 ORTHO05D005489 3.9e-107 392.9 655 43.4
BcaC02g10600 Brassica carinata HOM05D004640 ORTHO05D005489 5.1e-107 392.5 665 42.0
C04p25650 Brassica napus HOM05D004640 ORTHO05D005489 5.1e-107 392.5 665 42.0
C05p50900 Brassica napus HOM05D004640 ORTHO05D005489 5.1e-107 392.5 665 42.0
Sp2g03520 Schrenkiella parvula HOM05D004640 ORTHO05D005489 5.1e-107 392.5 661 42.4
BcaC06g31828 Brassica carinata HOM05D004640 ORTHO05D005489 6.7e-107 392.1 653 42.0
Duzib052G0332 Durio zibethinus HOM05D004640 ORTHO05D005489 5.7e-106 389.0 649 42.5
GSVIVG01022882001 Vitis vinifera HOM05D004640 ORTHO05D005489 2.8e-105 386.7 556 46.2
Gohir.D04G163900 Gossypium hirsutum HOM05D004640 ORTHO05D005489 1.4e-104 384.4 398 57.0
Ah.06g188240 Amaranthus hybridus HOM05D004640 ORTHO05D005489 4.1e-104 382.9 368 57.9
C01p37670 Brassica napus HOM05D004640 ORTHO05D005489 5.3e-104 382.5 660 41.7
BolC1t03731H Brassica oleracea HOM05D004640 ORTHO05D005489 5.3e-104 382.5 660 41.7
Nn7g37934 Nelumbo nucifera HOM05D004640 ORTHO05D005489 1.5e-103 380.9 421 54.2
Oeu032223.3 Olea europaea HOM05D000396 ORTHO05D000116 2.6e-103 380.2 409 55.7
AT1G60995 Arabidopsis thaliana HOM05D004640 ORTHO05D005489 4.5e-103 379.4 663 41.5
HanXRQChr15g0469061 Helianthus annuus HOM05D004640 ORTHO05D005489 1.7e-102 377.5 641 42.9
SGA_v2.0_scaffold51G18853 Striga asiatica HOM05D004640 ORTHO05D005489 1.1e-101 374.8 696 40.1
Os03g0659900 Oryza sativa ssp. japonica HOM05D004640 ORTHO05D005489 1.6e-100 370.9 671 39.9
DCAR_021303 Daucus carota HOM05D004640 ORTHO05D005489 7.9e-100 368.6 644 40.1
Actinidia36578 Actinidia chinensis HOM05D004640 ORTHO05D005489 6.3e-97 359.0 503 46.1
Lj4C822G11 Lonicera japonica HOM05D004640 ORTHO05D005489 2.4e-96 357.1 402 51.2
unitig_0.g396 Utricularia gibba HOM05D004640 ORTHO05D005489 3.1e-96 356.7 636 40.9
MBI01_g44452_MAGBIO Magnolia biondii HOM05D004640 ORTHO05D005489 1.6e-95 354.4 651 40.4
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 4.5e-95 352.8 525 44.8
Oeu046366.1 Olea europaea HOM05D004640 ORTHO05D005489 1.0e-91 341.7 604 41.9
HPP92_017742 Vanilla planifolia HOM05D004640 ORTHO05D005489 4.0e-91 339.7 656 38.0
BcaC09g49343 Brassica carinata HOM05D004640 ORTHO05D005489 5.2e-91 339.3 526 43.2
BolC4t24244H Brassica oleracea HOM05D004640 ORTHO05D005489 7.0e-88 328.9 412 49.3
TAR381G0517 Trochodendron aralioides HOM05D004640 ORTHO05D005489 3.5e-87 326.6 701 36.7
ATR0763G087 Amborella trichopoda HOM05D004640 ORTHO05D005489 2.6e-82 310.5 622 38.3
Zm00001eb218090 Zea mays HOM05D004640 ORTHO05D005489 6.5e-78 295.8 405 45.9
SMO116G0341 Selaginella moellendorffii HOM05D004640 ORTHO05D005489 4.6e-63 246.5 615 34.3
CDE12G0675 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 6.6e-62 242.7 365 42.7
Mapoly0014s0041 Marchantia polymorpha HOM05D004640 ORTHO05D005489 8.9e-59 232.3 457 37.6
Pp3c3_37820 Physcomitrium patens HOM05D004640 ORTHO05D005489 1.5e-58 231.5 417 38.4
AagrBONN_evm.TU.Sc2ySwM_344.1404 Anthoceros agrestis HOM05D004640 ORTHO05D005489 6.2e-52 209.5 452 35.0
CBR_g54224 Chara braunii HOM05D004640 ORTHO05D005489 2.3e-51 207.6 156 66.7
EL10Ac4g09783 Beta vulgaris HOM05D004640 ORTHO05D005489 2.0e-50 204.5 169 65.7
CAN.G124.21 Capsicum annuum HOM05D004640 ORTHO05D005489 1.7e-49 201.4 318 45.0
EL10Ac4g09779 Beta vulgaris HOM05D004640 ORTHO05D005489 5.2e-43 179.9 244 46.7
Haze_01729 Corylus avellana HOM05D004640 ORTHO05D005489 5.2e-43 179.9 291 43.3
CDE12G0207 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 6.0e-39 166.4 283 39.2
CDE12G0722 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 9.3e-32 142.5 267 40.8
Gohir.D04G163933 Gossypium hirsutum HOM05D004640 ORTHO05D005489 7.8e-31 139.4 200 43.5
TAR625G1136 Trochodendron aralioides HOM05D004640 ORTHO05D005489 7.8e-31 139.4 88 80.7
BraSC39t46176Z Brassica rapa HOM05D004640 ORTHO05D005489 7.3e-29 132.9 314 37.6
BNapus_Darmor_BZH_scaffold_271p00030 Brassica napus HOM05D004640 ORTHO05D005489 4.9e-25 120.2 262 37.4
RcHm_v2.0_Chr7g0230911 Rosa chinensis HOM05D004640 ORTHO05D005489 4.9e-25 120.2 67 92.5
Manes.07G017650 Manihot esculenta HOM05D004640 ORTHO05D005489 1.1e-24 119.0 72 84.7
Haze_01727 Corylus avellana HOM05D004640 ORTHO05D005489 7.1e-24 116.3 67 80.6
MBI01_g00654_MAGBIO Magnolia biondii HOM05D004640 ORTHO05D005489 2.7e-23 114.4 208 35.6
Haze_01724 Corylus avellana HOM05D004640 ORTHO05D005489 3.1e-19 100.9 144 36.8
Haze_01804 Corylus avellana HOM05D004640 ORTHO05D005489 1.5e-18 98.6 56 80.4
CDE12G0153 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 8.4e-17 92.8 271 28.8
HPP92_017709 Vanilla planifolia HOM05D004640 ORTHO05D005489 8.4e-17 92.8 192 35.9
SalBow8G0731 Salvia bowleyana HOM05D004640 ORTHO05D005489 1.6e-12 78.6 57 68.4
BNapus_Darmor_BZH_scaffold_271p00020 Brassica napus HOM05D004640 ORTHO05D005489 3.4e-10 70.9 79 51.9
TAR625G0012 Trochodendron aralioides HOM05D004640 ORTHO05D005489 3.8e-09 67.4 114 44.7
TAR625G0944 Trochodendron aralioides HOM05D004640 ORTHO05D005489 1.4e-08 65.5 110 34.5
Zm00001eb114350 Zea mays HOM05D004640 ORTHO05D005489 3.2e-08 64.3 53 56.6
arahy.Tifrunner.gnm1.ann1.VBF1S6 Arachis hypogaea HOM05D002443 ORTHO05D002674 2.7e-07 61.2 107 43.9
RcHm_v2.0_Chr6g0266101 Rosa chinensis HOM05D004640 ORTHO05D005489 1.0e-06 59.3 30 96.7
SHI16674 Sapria himalayana HOM05D004640 ORTHO05D005489 1.8e-06 58.5 35 71.4
SHI16673 Sapria himalayana HOM05D004640 ORTHO05D005489 3.0e-06 57.8 81 48.1
CDE12G0158 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 5.1e-06 57.0 200 31.0
A03p68880 Brassica napus HOM05D004640 ORTHO05D005489 6.7e-06 56.6 77 48.1
Haze_01802 Corylus avellana HOM05D004640 ORTHO05D005489 6.7e-06 56.6 99 36.4


User provided reference genes

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