Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07158 Selenicereus undatus HOM05D000162 ORTHO05D000090 3.1e-137 493.0 583 100.0
Hund07146 Selenicereus undatus HOM05D000162 ORTHO05D000090 2.2e-18 98.2 53 84.9
AUR62006930 Chenopodium quinoa HOM05D000162 ORTHO05D000090 6.9e-12 76.6 53 64.2
AUR62006934 Chenopodium quinoa HOM05D000162 ORTHO05D000090 9.0e-12 76.3 53 64.2
AUR62006936 Chenopodium quinoa HOM05D000162 ORTHO05D000090 9.0e-12 76.3 53 64.2
EL10Ac4g09382 Beta vulgaris HOM05D000162 ORTHO05D000090 5.8e-11 73.6 55 63.6
EL10Ac4g09388 Beta vulgaris HOM05D000162 ORTHO05D000090 5.8e-11 73.6 55 63.6
EL10Ac4g09442 Beta vulgaris HOM05D000162 ORTHO05D000090 7.6e-11 73.2 71 52.1
EL10Ac4g09439 Beta vulgaris HOM05D000162 ORTHO05D000090 9.9e-11 72.8 55 63.6
EL10Ac4g09448 Beta vulgaris HOM05D000162 ORTHO05D000090 9.9e-11 72.8 71 52.1
EL10Ac4g09450 Beta vulgaris HOM05D000162 ORTHO05D000090 9.9e-11 72.8 55 63.6
EL10Ac4g09443 Beta vulgaris HOM05D000162 ORTHO05D000090 1.3e-10 72.4 55 61.8
EL10Ac4g09487 Beta vulgaris HOM05D000162 ORTHO05D000090 1.3e-10 72.4 55 63.6
EL10Ac4g09482 Beta vulgaris HOM05D000162 ORTHO05D000090 2.2e-10 71.6 55 63.6
AUR62000614 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.9e-10 71.2 44 70.5
EL10Ac4g09428 Beta vulgaris HOM05D000162 ORTHO05D000090 3.8e-10 70.9 55 61.8
EL10Ac4g09445 Beta vulgaris HOM05D000162 ORTHO05D000090 3.8e-10 70.9 71 50.7
EL10Ac4g09451 Beta vulgaris HOM05D000162 ORTHO05D000090 3.8e-10 70.9 55 61.8
EL10Ac4g09484 Beta vulgaris HOM05D000162 ORTHO05D000090 3.8e-10 70.9 55 61.8
EL10Ac4g09525 Beta vulgaris HOM05D000162 ORTHO05D000090 3.8e-10 70.9 71 50.7
EL10Ac4g09429 Beta vulgaris HOM05D000162 ORTHO05D000090 4.9e-10 70.5 55 61.8
EL10Ac4g09523 Beta vulgaris HOM05D000162 ORTHO05D000090 4.9e-10 70.5 55 61.8
EL10Ac4g09524 Beta vulgaris HOM05D000162 ORTHO05D000090 4.9e-10 70.5 55 61.8
EL10Ac4g09528 Beta vulgaris HOM05D000162 ORTHO05D000090 4.9e-10 70.5 55 61.8
AUR62000391 Chenopodium quinoa HOM05D000162 ORTHO05D000090 6.4e-10 70.1 45 68.9
AUR62005259 Chenopodium quinoa HOM05D000162 ORTHO05D000090 6.4e-10 70.1 48 62.5
EL10Ac4g09405 Beta vulgaris HOM05D000162 ORTHO05D000090 1.1e-09 69.3 55 60.0
EL10Ac4g09406 Beta vulgaris HOM05D000162 ORTHO05D000090 1.1e-09 69.3 55 61.8
EL10Ac4g09567 Beta vulgaris HOM05D000162 ORTHO05D000090 1.1e-09 69.3 55 60.0
EL10Ac4g09379 Beta vulgaris HOM05D000162 ORTHO05D000090 1.4e-09 68.9 71 49.3
EL10Ac8g19159 Beta vulgaris HOM05D000162 ORTHO05D000090 1.4e-09 68.9 55 60.0
AUR62000708 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.4e-09 68.9 48 62.5
EL10Ac4g09440 Beta vulgaris HOM05D000162 ORTHO05D000090 1.9e-09 68.6 55 60.0
AUR62000580 Chenopodium quinoa HOM05D000162 ORTHO05D000090 4.2e-09 67.4 45 62.2
EL10Ac4g09425 Beta vulgaris HOM05D000162 ORTHO05D000090 5.4e-09 67.0 55 58.2
EL10Ac4g09426 Beta vulgaris HOM05D000162 ORTHO05D000090 7.1e-09 66.6 55 60.0
CSS0018187 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 7.1e-09 66.6 88 42.0
CSS0025424 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 7.1e-09 66.6 88 42.0
AUR62000541 Chenopodium quinoa HOM05D000162 ORTHO05D000090 7.1e-09 66.6 41 70.7
AUR62000542 Chenopodium quinoa HOM05D000162 ORTHO05D000090 7.1e-09 66.6 41 70.7
AUR62006893 Chenopodium quinoa HOM05D000162 ORTHO05D000090 7.1e-09 66.6 41 70.7
AUR62006892 Chenopodium quinoa HOM05D000162 ORTHO05D000090 9.3e-09 66.2 41 70.7
Ah.06g189050 Amaranthus hybridus HOM05D000162 ORTHO05D000090 1.6e-08 65.5 45 62.2
CSS0005197 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 1.6e-08 65.5 65 44.6
CSS0009041 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 1.6e-08 65.5 65 44.6
AUR62000618 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.6e-08 65.5 41 65.9
AUR62006932 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.1e-08 65.1 41 68.3
Gorai.009G376400 Gossypium raimondii HOM05D000162 ORTHO05D000090 2.1e-08 65.1 53 52.8
AUR62000621 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.7e-08 64.7 41 65.9
EL10Ac4g09381 Beta vulgaris HOM05D000162 ORTHO05D000090 3.5e-08 64.3 55 58.2
EL10Ac4g09384 Beta vulgaris HOM05D000162 ORTHO05D000090 3.5e-08 64.3 55 58.2
AUR62006965 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.5e-08 64.3 41 65.9
AUR62000377 Chenopodium quinoa HOM05D000162 ORTHO05D000090 4.6e-08 63.9 53 50.9
EL10Ac4g09850 Beta vulgaris HOM05D000162 ORTHO05D000090 7.8e-08 63.2 44 63.6
CSS0011266 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 7.8e-08 63.2 92 38.0
CSS0022066 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 7.8e-08 63.2 59 47.5
CSS0025075 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 2.3e-07 61.6 53 50.9
CSS0026184 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 2.3e-07 61.6 53 50.9
CSS0035669 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 2.3e-07 61.6 53 50.9
CSS0032657 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 3.0e-07 61.2 61 45.9
AUR62000611 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.9e-07 60.8 40 67.5
vmacro15544 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 3.9e-07 60.8 61 44.3
Actinidia04470 Actinidia chinensis HOM05D000162 ORTHO05D000090 5.1e-07 60.5 52 51.9
EL10Ac4g09782 Beta vulgaris HOM05D000162 ORTHO05D000090 5.1e-07 60.5 70 42.9
Ah.06g195650 Amaranthus hybridus HOM05D000162 ORTHO05D000090 6.6e-07 60.1 53 49.1
EL10Ac6g14364 Beta vulgaris HOM05D000162 ORTHO05D000090 6.6e-07 60.1 58 51.7
Gorai.009G377900 Gossypium raimondii HOM05D000162 ORTHO05D000090 6.6e-07 60.1 68 44.1
SalBow1G0248 Salvia bowleyana HOM05D000162 ORTHO05D000090 6.6e-07 60.1 61 45.9
SalBow1G5498 Salvia bowleyana HOM05D000162 ORTHO05D000090 6.6e-07 60.1 52 51.9
AUR62006791 Chenopodium quinoa HOM05D000162 ORTHO05D000090 8.7e-07 59.7 53 50.9
Actinidia08438 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.1e-06 59.3 61 41.0
CSS0005645 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 1.5e-06 58.9 53 49.1
AUR62031672 Chenopodium quinoa HOM05D000027 ORTHO05D000500 1.5e-06 58.9 50 48.0
SalBow3G2341 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.5e-06 58.9 59 49.2
SalBow3G4441 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.5e-06 58.9 59 49.2
CSS0012675 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 1.9e-06 58.5 92 37.0
AUR62000844 Chenopodium quinoa HOM05D000162 ORTHO05D003288 1.9e-06 58.5 108 35.2
RcHm_v2.0_Chr5g0072861 Rosa chinensis HOM05D000162 ORTHO05D000090 1.9e-06 58.5 53 47.2
AUR62006802 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.5e-06 58.2 41 63.4
FAN11G1276 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.5e-06 58.2 63 41.3
MD11G1115600 Malus domestica HOM05D000162 ORTHO05D000090 2.5e-06 58.2 53 47.2
AUR62032556 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.3e-06 57.8 53 47.2
Gorai.009G378500 Gossypium raimondii HOM05D000162 ORTHO05D000090 3.3e-06 57.8 44 56.8
Ah.06g195670 Amaranthus hybridus HOM05D000162 ORTHO05D000090 4.3e-06 57.4 42 54.8
RcHm_v2.0_Chr5g0069601 Rosa chinensis HOM05D000162 ORTHO05D000090 4.3e-06 57.4 53 45.3
Lsat_1_v5_gn_2_107320 Lactuca sativa HOM05D002667 ORTHO05D002909 5.6e-06 57.0 44 50.0
Hma1.2p1_1276F.1_g272140 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 7.3e-06 56.6 61 39.3
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 7.3e-06 56.6 63 38.1
Rhsim04G0181600 Rhododendron simsii HOM05D000162 ORTHO05D000090 7.3e-06 56.6 59 44.1
SalBow2G3114 Salvia bowleyana HOM05D000162 ORTHO05D000090 7.3e-06 56.6 54 48.1
vmacro08416 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 7.3e-06 56.6 62 41.9
vmacro08419 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 7.3e-06 56.6 58 43.1
Rhsim04G0181900 Rhododendron simsii HOM05D000162 ORTHO05D000090 9.6e-06 56.2 59 45.8
SalBow3G1046 Salvia bowleyana HOM05D000162 ORTHO05D000090 9.6e-06 56.2 59 47.5


User provided reference genes

Program Settings