Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 0.0e+00 1498.0 761 100.0
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 1.4e-214 750.4 780 55.4
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 1.1e-190 671.0 649 56.9
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 1.7e-172 610.5 769 51.0
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 7.1e-142 508.8 759 41.5
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 4.9e-135 486.1 783 42.4
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 4.4e-128 463.0 703 42.8
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 5.8e-128 462.6 787 42.8
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 7.6e-128 462.2 725 43.9
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 4.9e-127 459.5 739 40.6
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 8.4e-127 458.8 725 43.7
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 7.1e-126 455.7 767 40.8
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 4.6e-125 453.0 740 42.3
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 1.3e-124 451.4 771 40.9
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 7.3e-123 445.7 725 39.9
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 4.8e-122 443.0 756 39.7
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.4e-121 441.4 740 41.1
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 3.1e-121 440.3 548 46.7
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 5.8e-120 436.0 735 41.1
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 1.3e-119 434.9 736 40.4
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 1.7e-119 434.5 728 41.1
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 2.2e-119 434.1 736 40.4
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.4e-118 431.4 733 41.3
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 1.9e-118 431.0 781 39.9
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 3.2e-118 430.3 706 40.8
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 9.3e-118 428.7 751 39.7
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 2.7e-117 427.2 724 39.9
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 3.5e-117 426.8 810 37.5
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 1.1e-115 421.8 733 41.9
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 3.3e-115 420.2 743 40.5
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 9.6e-115 418.7 768 40.5
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 7.6e-112 409.1 714 38.8
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 1.3e-108 398.3 680 40.3
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 8.7e-108 395.6 722 40.6
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 3.3e-107 393.7 618 40.6
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 2.1e-106 391.0 757 39.9
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 4.0e-105 386.7 723 39.1
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 4.5e-104 383.3 711 39.9
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 7.6e-104 382.5 711 39.9
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 1.0e-103 382.1 771 36.7
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 1.1e-102 378.6 668 39.2
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 3.2e-102 377.1 548 46.4
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 2.7e-101 374.0 665 38.8
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 3.5e-101 373.6 688 39.1
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 6.0e-101 372.9 717 37.5
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 1.5e-99 368.2 762 36.0
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 4.3e-99 366.7 686 38.6
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 1.3e-98 365.2 760 36.4
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 1.8e-97 361.3 711 37.4
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 2.4e-97 360.9 718 38.7
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 9.0e-97 359.0 741 37.7
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 1.5e-96 358.2 730 36.8
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 1.5e-96 358.2 712 36.7
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 1.3e-95 355.1 576 41.1
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 6.5e-95 352.8 739 35.9
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 6.5e-95 352.8 673 39.2
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 1.2e-93 348.6 706 37.5
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 2.7e-93 347.4 759 35.7
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 1.0e-92 345.5 678 38.1
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 1.8e-92 344.7 503 43.5
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 8.7e-92 342.4 558 38.5
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 2.5e-91 340.9 630 39.8
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 1.6e-90 338.2 396 48.0
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 3.7e-90 337.0 562 38.4
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 3.7e-90 337.0 660 38.6
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 8.2e-90 335.9 721 36.3
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 1.1e-89 335.5 605 36.7
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 4.5e-88 330.1 617 38.1
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 1.0e-87 328.9 444 44.4
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 1.3e-87 328.6 711 36.4
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 3.8e-87 327.0 717 34.4
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 3.8e-87 327.0 714 36.3
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 1.9e-86 324.7 735 34.8
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.9e-86 324.7 553 40.0
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 1.9e-86 324.7 732 35.1
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 5.5e-86 323.2 735 35.1
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 4.6e-85 320.1 573 37.2
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 6.7e-84 316.2 730 34.9
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 6.7e-84 316.2 400 48.0
Hma1.2p1_0153F.1_g067880 Hydrangea macrophylla HOM05D006063 ORTHO05D000023 1.1e-83 315.5 440 45.7
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 2.5e-83 314.3 728 34.9
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 1.1e-81 308.9 521 42.0
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 3.4e-80 303.9 549 38.3
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 5.1e-76 290.0 650 36.6
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 9.4e-70 269.2 504 37.7
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 2.3e-68 264.6 876 30.3
Atru.chr2.1232 Acer truncatum HOM05D006063 ORTHO05D000023 1.3e-63 248.8 332 45.2
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 3.2e-62 244.2 697 32.3
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 5.2e-60 236.9 308 47.7
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 6.5e-55 219.9 495 34.9
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 9.4e-54 216.1 660 30.9
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 3.7e-50 204.1 285 43.9
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 3.1e-49 201.1 610 31.1
CDE05G2869 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 1.6e-48 198.7 333 37.2
TPR.G10281 Trifolium pratense HOM05D006063 ORTHO05D000023 1.6e-48 198.7 369 35.8
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.3e-47 195.7 537 34.8
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 4.3e-46 190.7 395 38.7
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 1.6e-45 188.7 394 37.6
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 2.8e-45 188.0 340 40.9
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 8.0e-45 186.4 455 34.9
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 6.8e-44 183.3 753 27.2
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 2.0e-43 181.8 575 28.2
HPP92_006232 Vanilla planifolia HOM05D006063 ORTHO05D000023 3.4e-43 181.0 241 44.0
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 4.6e-40 170.6 303 42.2
HPP92_006233 Vanilla planifolia HOM05D006063 ORTHO05D000023 9.5e-38 162.9 408 34.3
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 1.2e-35 156.0 392 34.4
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 1.2e-32 146.0 181 51.9
CDE05G3203 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 1.2e-32 146.0 343 38.5
DCAR_005531 Daucus carota HOM05D006063 ORTHO05D000023 3.1e-28 131.3 297 31.6
A05p43200 Brassica napus HOM05D000005 ORTHO05D000449 1.7e-23 115.5 89 65.2
RcHm_v2.0_Chr3g0448831 Rosa chinensis HOM05D006063 ORTHO05D000023 1.7e-23 115.5 149 44.3
CsaV3_1G044530 Cucumis sativus L. HOM05D006063 ORTHO05D000023 1.5e-22 112.5 117 54.7
SEGI_40887 Sequoiadendron giganteum HOM05D006063 ORTHO05D000023 1.4e-20 105.9 273 34.4
BraA05t23062Z Brassica rapa HOM05D006063 ORTHO05D000023 2.0e-19 102.1 80 62.5
C05p62930 Brassica napus HOM05D000005 ORTHO05D000294 3.9e-15 87.8 149 38.9
MBI18_g46978_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 2.1e-13 82.0 269 30.5
Cpa.g.sc51.64 Carica papaya HOM05D006063 ORTHO05D000023 4.7e-13 80.9 105 43.8
Cpa.g.sc51.65 Carica papaya HOM05D006063 ORTHO05D000023 1.4e-09 69.3 120 35.0
Dinv03782 Davidia involucrata HOM05D006063 ORTHO05D045148 1.0e-07 63.2 46 71.7
C05p62940 Brassica napus HOM05D000005 ORTHO05D000449 9.6e-06 56.6 139 37.4


User provided reference genes

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