Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07019 Selenicereus undatus HOM05D003201 ORTHO05D008805 1.6e-109 399.4 206 100.0
AUR62000916 Chenopodium quinoa HOM05D003201 ORTHO05D008805 3.0e-47 192.6 154 66.9
AUR62005054 Chenopodium quinoa HOM05D003201 ORTHO05D008805 3.7e-45 185.7 148 66.2
EL10Ac4g09260 Beta vulgaris HOM05D003201 ORTHO05D008805 2.0e-43 179.9 191 56.0
CiPaw.03G255400 Carya illinoinensis HOM05D003201 ORTHO05D008805 5.5e-41 171.8 162 61.1
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 3.6e-40 169.1 160 59.4
Sabra13G0129200 Salix brachista HOM05D003201 ORTHO05D008805 3.6e-40 169.1 159 57.9
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 6.1e-40 168.3 159 59.1
Haze_24508 Corylus avellana HOM05D003201 ORTHO05D008805 1.0e-39 167.5 160 60.0
FAN11G2508 Fragaria x ananassa HOM05D003201 ORTHO05D008805 2.3e-39 166.4 159 56.6
Manes.18G121700 Manihot esculenta HOM05D003201 ORTHO05D008805 8.8e-39 164.5 161 56.5
Dinv15525 Davidia involucrata HOM05D003201 ORTHO05D008805 3.4e-38 162.5 160 57.5
FvH4_3g46100 Fragaria vesca HOM05D003201 ORTHO05D008805 2.8e-37 159.5 159 55.3
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 1.8e-36 156.8 161 53.4
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 1.8e-36 156.8 154 55.8
FAN21G2623 Fragaria x ananassa HOM05D003201 ORTHO05D008805 3.1e-36 156.0 159 54.1
QL04p043008 Quercus lobata HOM05D003201 ORTHO05D008805 3.1e-36 156.0 154 55.8
Ca_25246_v3 Cicer arietinum L. HOM05D003201 ORTHO05D008805 9.1e-36 154.5 160 55.0
Actinidia16221 Actinidia chinensis HOM05D003201 ORTHO05D008805 1.2e-35 154.1 155 54.8
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 1.2e-35 154.1 161 57.1
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 1.2e-35 154.1 157 53.5
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 1.6e-35 153.7 157 54.1
CSS0031904 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008805 2.0e-35 153.3 159 56.6
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 2.7e-35 152.9 161 57.1
MD11G1000200 Malus domestica HOM05D003201 ORTHO05D008805 4.5e-35 152.1 160 53.8
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 4.5e-35 152.1 160 55.6
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 4.5e-35 152.1 161 52.8
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 4.5e-35 152.1 161 57.1
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 4.5e-35 152.1 156 55.1
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 7.7e-35 151.4 166 54.2
RcHm_v2.0_Chr5g0084171 Rosa chinensis HOM05D003201 ORTHO05D008805 1.0e-34 151.0 159 52.8
TAR623G0449 Trochodendron aralioides HOM05D003201 ORTHO05D008805 1.0e-34 151.0 160 57.5
FAN25G0659 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.7e-34 150.2 151 55.0
Phvul.004G131600 Phaseolus vulgaris HOM05D003201 ORTHO05D008805 1.7e-34 150.2 154 53.9
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 2.3e-34 149.8 155 54.8
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 3.8e-34 149.1 160 55.6
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 5.0e-34 148.7 161 54.0
Prupe.6G000300 Prunus persica HOM05D003201 ORTHO05D008805 5.0e-34 148.7 159 50.3
Hma1.2p1_1133F.1_g260370 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 6.5e-34 148.3 160 51.9
Hma1.2p1_1133F.1_g260360 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 8.6e-34 147.9 161 52.2
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 1.1e-33 147.5 158 53.2
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 1.5e-33 147.1 161 54.7
vmacro04280 Vaccinium macrocarpon HOM05D003201 ORTHO05D008805 3.3e-33 146.0 160 53.8
Psat1g112800 Pisum sativum HOM05D003201 ORTHO05D008805 5.5e-33 145.2 155 53.5
THA.LOC104806236 Tarenaya hassleriana HOM05D003201 ORTHO05D008805 7.2e-33 144.8 157 54.8
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 1.2e-32 144.1 160 52.5
Lj1A555G38 Lonicera japonica HOM05D003201 ORTHO05D008805 3.6e-32 142.5 165 51.5
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 8.0e-32 141.4 155 54.8
CANSAT35G1729 Cannabis sativa HOM05D003201 ORTHO05D008805 8.0e-32 141.4 154 54.5
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 1.8e-31 140.2 156 53.2
Sp7g18690 Schrenkiella parvula HOM05D003201 ORTHO05D008805 2.3e-31 139.8 156 53.2
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 3.0e-31 139.4 159 51.6
CsaV3_6G041170 Cucumis sativus L. HOM05D003201 ORTHO05D008805 5.2e-31 138.7 172 51.7
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 8.9e-31 137.9 154 53.2
Sed0008662 Sechium edule HOM05D003201 ORTHO05D008805 8.9e-31 137.9 152 53.9
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 1.2e-30 137.5 154 53.2
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 1.5e-30 137.1 164 48.2
MELO3C024592.2 Cucumis melo HOM05D003201 ORTHO05D008805 1.5e-30 137.1 152 54.6
Rhsim13G0235500 Rhododendron simsii HOM05D003201 ORTHO05D008805 1.5e-30 137.1 141 55.3
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 3.4e-30 136.0 154 53.9
ClCG01G015060 Citrullus lanatus HOM05D003201 ORTHO05D008805 9.8e-30 134.4 152 53.9
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 9.8e-30 134.4 152 49.3
Cpa.g.sc30.50 Carica papaya HOM05D003201 ORTHO05D008805 3.7e-29 132.5 160 49.4
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 3.7e-29 132.5 159 49.7
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 6.3e-29 131.7 157 49.0
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 6.3e-29 131.7 167 48.5
AL7G33540 Arabidopsis lyrata HOM05D003201 ORTHO05D008805 8.3e-29 131.3 155 52.9
Carub.0007s2082 Capsella rubella HOM05D003201 ORTHO05D008805 8.3e-29 131.3 157 52.9
AT4G20350 Arabidopsis thaliana HOM05D003201 ORTHO05D008805 1.1e-28 131.0 156 52.6
DCAR_028397 Daucus carota HOM05D003201 ORTHO05D008805 5.4e-28 128.6 161 49.1
Peaxi162Scf01181g00210 Petunia axillaris HOM05D003201 ORTHO05D008805 5.4e-28 128.6 197 44.2
COL.COLO4_24749 Corchorus olitorius HOM05D003201 ORTHO05D008805 2.0e-27 126.7 160 48.8
Sc18g0002730 Simmondsia chinensis HOM05D003201 ORTHO05D008805 2.0e-27 126.7 122 57.4
Duzib093G2193 Durio zibethinus HOM05D003201 ORTHO05D008805 4.5e-27 125.6 148 50.7
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 4.5e-27 125.6 157 47.8
arahy.Tifrunner.gnm1.ann1.75P5EB Arachis hypogaea HOM05D003201 ORTHO05D008805 5.9e-27 125.2 131 52.7
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 5.9e-27 125.2 150 51.3
Nitab4.5_0000075g0050 Nicotiana tabacum HOM05D003201 ORTHO05D008805 5.9e-27 125.2 181 47.0
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 1.0e-26 124.4 154 47.4
HPP92_021155 Vanilla planifolia HOM05D003201 ORTHO05D008805 1.3e-26 124.0 159 47.8
CAN.G431.2 Capsicum annuum HOM05D003201 ORTHO05D008805 1.7e-26 123.6 161 47.2
MBI13_g36948_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 2.3e-26 123.2 145 50.3
PGSC0003DMG400026601 Solanum tuberosum HOM05D003201 ORTHO05D008805 2.3e-26 123.2 160 46.2
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 3.8e-26 122.5 121 56.2
Zm00001eb047810 Zea mays HOM05D003201 ORTHO05D008805 5.0e-26 122.1 171 42.7
MSTRG.12815 Avicennia marina HOM05D003201 ORTHO05D008805 1.9e-25 120.2 159 47.8
CARHR227170 Cardamine hirsuta HOM05D003201 ORTHO05D008805 1.9e-25 120.2 160 49.4
Solyc01g057570.3 Solanum lycopersicum HOM05D003201 ORTHO05D008805 2.1e-24 116.7 163 45.4
Sopen01g022430 Solanum pennellii HOM05D003201 ORTHO05D008805 2.1e-24 116.7 161 45.3
Sopen01g019970 Solanum pennellii HOM05D003201 ORTHO05D008805 2.3e-23 113.2 160 45.0
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 3.0e-23 112.8 105 58.1
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 5.2e-23 112.1 179 41.9
Lsat_1_v5_gn_1_71340 Lactuca sativa HOM05D003201 ORTHO05D008805 2.0e-22 110.2 100 58.0
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 2.0e-22 110.2 165 43.0
unitig_0.g1143 Utricularia gibba HOM05D003201 ORTHO05D008805 4.9e-21 105.5 154 43.5
SalBow3G4219 Salvia bowleyana HOM05D003201 ORTHO05D008805 8.3e-21 104.8 98 58.2
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 4.1e-20 102.4 157 40.8
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.5e-17 94.0 149 42.3
SMO147G0005 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 1.5e-17 94.0 156 42.3
Ciclev10029320m.g Citrus clementina HOM05D003201 ORTHO05D008805 1.6e-16 90.5 78 62.8
Gorai.006G132500 Gossypium raimondii HOM05D003201 ORTHO05D008805 1.6e-16 90.5 87 60.9
SMO132G0004 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 3.1e-15 86.3 171 36.8
Os10g0420000 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008805 6.8e-15 85.1 165 37.6
Nitab4.5_0005125g0010 Nicotiana tabacum HOM05D003201 ORTHO05D008805 1.5e-14 84.0 121 47.9
Atru.chr2.209 Acer truncatum HOM05D003201 ORTHO05D008805 2.0e-14 83.6 84 58.3
MCO03G055 Micromonas commoda HOM05D003201 ORTHO05D008805 1.4e-12 77.4 151 38.4
CBR_g45547 Chara braunii HOM05D003201 ORTHO05D008805 1.3e-10 70.9 268 28.0
AUR62004843 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.6e-08 63.9 46 69.6


User provided reference genes

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