Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06921 Selenicereus undatus HOM05D004809 ORTHO05D006732 1.1e-49 199.5 95 100.0
Ah.04g163730 Amaranthus hybridus HOM05D004809 ORTHO05D006732 4.1e-31 137.9 86 74.4
TAR636G3234 Trochodendron aralioides HOM05D004809 ORTHO05D006732 1.2e-30 136.3 86 72.1
EL10Ac4g08666 Beta vulgaris HOM05D004809 ORTHO05D006732 1.6e-30 136.0 85 75.3
Duzib106G1880 Durio zibethinus HOM05D004809 ORTHO05D006732 5.9e-30 134.0 85 67.1
AUR62041546 Chenopodium quinoa HOM05D004809 ORTHO05D006732 7.7e-30 133.7 90 70.0
vmacro07229 Vaccinium macrocarpon HOM05D004809 ORTHO05D006732 5.0e-29 131.0 86 66.3
Lj2A29T80 Lonicera japonica HOM05D004809 ORTHO05D006732 1.1e-28 129.8 87 63.2
FvH4_5g38020 Fragaria vesca HOM05D004809 ORTHO05D006732 1.9e-28 129.0 88 67.0
FAN08G1717 Fragaria x ananassa HOM05D004809 ORTHO05D006732 1.9e-28 129.0 88 67.0
FAN18G3489 Fragaria x ananassa HOM05D004809 ORTHO05D006732 1.9e-28 129.0 88 67.0
Actinidia18582 Actinidia chinensis HOM05D004809 ORTHO05D006732 2.5e-28 128.6 86 67.4
Rhsim03G0105000 Rhododendron simsii HOM05D004809 ORTHO05D006732 2.5e-28 128.6 86 66.3
Dinv20809 Davidia involucrata HOM05D004809 ORTHO05D006732 3.2e-28 128.3 85 69.4
CSS0050047 Camellia sinensis var. sinensis HOM05D004809 ORTHO05D006732 4.2e-28 127.9 86 67.4
Prupe.2G084800 Prunus persica HOM05D004809 ORTHO05D006732 4.2e-28 127.9 86 67.4
Ciclev10031499m.g Citrus clementina HOM05D004809 ORTHO05D006732 5.5e-28 127.5 86 66.3
MBI17_g00711_MAGBIO Magnolia biondii HOM05D004809 ORTHO05D006732 1.2e-27 126.3 88 67.0
GSVIVG01034738001 Vitis vinifera HOM05D004809 ORTHO05D006732 1.2e-27 126.3 79 72.2
FAN04G1536 Fragaria x ananassa HOM05D004809 ORTHO05D006732 1.6e-27 125.9 88 68.2
RcHm_v2.0_Chr1g0333111 Rosa chinensis HOM05D004809 ORTHO05D006732 2.1e-27 125.6 85 67.1
Sc06g0002220 Simmondsia chinensis HOM05D004809 ORTHO05D006732 2.1e-27 125.6 85 71.8
Lalb_Chr02g0151411 Lupinus albus HOM05D004809 ORTHO05D006732 4.7e-27 124.4 86 64.0
arahy.Tifrunner.gnm1.ann1.9JEX28 Arachis hypogaea HOM05D004809 ORTHO05D006732 6.1e-27 124.0 86 62.8
arahy.Tifrunner.gnm1.ann1.RW77QZ Arachis hypogaea HOM05D004809 ORTHO05D006732 6.1e-27 124.0 86 62.8
Gorai.008G098400 Gossypium raimondii HOM05D004809 ORTHO05D006732 1.4e-26 122.9 86 62.8
QL04p042558 Quercus lobata HOM05D004809 ORTHO05D006732 1.4e-26 122.9 85 63.5
QL04p042573 Quercus lobata HOM05D004809 ORTHO05D006732 1.4e-26 122.9 85 63.5
Cc02_g09980 Coffea canephora HOM05D004809 ORTHO05D006732 1.8e-26 122.5 86 64.0
Nn6g35016 Nelumbo nucifera HOM05D004809 ORTHO05D006732 2.3e-26 122.1 86 65.1
Gohir.D12G091000 Gossypium hirsutum HOM05D004809 ORTHO05D006732 3.0e-26 121.7 86 62.8
Hma1.2p1_0352F.1_g133010 Hydrangea macrophylla HOM05D004809 ORTHO05D006732 3.0e-26 121.7 86 62.8
Solyc11g007320.2 Solanum lycopersicum HOM05D004809 ORTHO05D006732 3.0e-26 121.7 86 64.0
Thecc.10G104900 Theobroma cacao HOM05D004809 ORTHO05D006732 4.0e-26 121.3 86 62.8
CiPaw.13G037200 Carya illinoinensis HOM05D004809 ORTHO05D006732 5.2e-26 120.9 84 66.7
TPR.G2503 Trifolium pratense HOM05D004809 ORTHO05D006732 6.7e-26 120.6 86 60.5
COL.COLO4_20964 Corchorus olitorius HOM05D004809 ORTHO05D006732 8.8e-26 120.2 86 60.5
CAN.G534.16 Capsicum annuum HOM05D004809 ORTHO05D006732 2.0e-25 119.0 86 64.0
Glyma.20G187700 Glycine max HOM05D004809 ORTHO05D006732 2.0e-25 119.0 86 61.6
PGSC0003DMG400019479 Solanum tuberosum HOM05D004809 ORTHO05D006732 2.0e-25 119.0 86 64.0
Atru.chr12.976 Acer truncatum HOM05D004809 ORTHO05D006732 2.6e-25 118.6 85 61.2
Sopen11g003210 Solanum pennellii HOM05D004809 ORTHO05D006732 2.6e-25 118.6 86 62.8
Zm00001eb063700 Zea mays HOM05D004809 ORTHO05D006732 3.3e-25 118.2 63 81.0
Eucgr.G02708 Eucalyptus grandis HOM05D004809 ORTHO05D006732 4.4e-25 117.9 84 65.5
Psat6g176720 Pisum sativum HOM05D004809 ORTHO05D006732 7.5e-25 117.1 86 58.1
Aa31LG5G21540 Aethionema arabicum HOM05D004809 ORTHO05D006732 9.7e-25 116.7 68 75.0
Carub.0004s1815 Capsella rubella HOM05D004809 ORTHO05D006732 9.7e-25 116.7 72 70.8
Lj5g0024267 Lotus japonicus HOM05D004809 ORTHO05D006732 1.7e-24 115.9 86 60.5
Manes.07G089701 Manihot esculenta HOM05D004809 ORTHO05D006732 2.2e-24 115.5 86 61.6
HPP92_026096 Vanilla planifolia HOM05D004809 ORTHO05D006732 2.2e-24 115.5 83 61.4
BraA05t19899Z Brassica rapa HOM05D004809 ORTHO05D006732 4.8e-24 114.4 86 62.8
Haze_02592 Corylus avellana HOM05D004809 ORTHO05D006732 4.8e-24 114.4 112 51.8
CsaV3_5G035620 Cucumis sativus L. HOM05D004809 ORTHO05D006732 4.8e-24 114.4 86 61.6
Medtr1g492850 Medicago truncatula HOM05D004809 ORTHO05D006732 4.8e-24 114.4 81 60.5
ClCG05G021650 Citrullus lanatus HOM05D004809 ORTHO05D006732 6.3e-24 114.0 75 68.0
BcaB02g09358 Brassica carinata HOM05D004809 ORTHO05D006732 8.2e-24 113.6 72 70.8
A05p09440 Brassica napus HOM05D004809 ORTHO05D006732 8.2e-24 113.6 72 70.8
A05p09490 Brassica napus HOM05D004809 ORTHO05D006732 8.2e-24 113.6 72 70.8
Nitab4.5_0000962g0070 Nicotiana tabacum HOM05D004809 ORTHO05D006732 8.2e-24 113.6 74 66.2
PGR142G2585 Punica granatum HOM05D004809 ORTHO05D006732 1.1e-23 113.2 86 59.3
BolC4t22822H Brassica oleracea HOM05D004809 ORTHO05D006732 1.4e-23 112.8 87 60.9
DCAR_028402 Daucus carota HOM05D004809 ORTHO05D006732 1.4e-23 112.8 73 69.9
ECA232G3125 Erigeron canadensis HOM05D004809 ORTHO05D006732 1.4e-23 112.8 86 64.0
MD07G1067800 Malus domestica HOM05D004809 ORTHO05D006732 1.4e-23 112.8 83 61.4
Peaxi162Scf00244g01123 Petunia axillaris HOM05D004809 ORTHO05D006732 1.4e-23 112.8 86 61.6
Ca_10498_v3 Cicer arietinum L. HOM05D004809 ORTHO05D006732 1.8e-23 112.5 86 57.0
BcaC02g11751 Brassica carinata HOM05D004809 ORTHO05D006732 2.4e-23 112.1 73 68.5
MD02G1248400 Malus domestica HOM05D004809 ORTHO05D006732 2.4e-23 112.1 80 63.8
Sed0005221 Sechium edule HOM05D004809 ORTHO05D006732 2.4e-23 112.1 86 59.3
C04p11750 Brassica napus HOM05D004809 ORTHO05D006732 3.1e-23 111.7 72 69.4
Migut.F00896 Erythranthe guttata HOM05D004809 ORTHO05D006732 4.1e-23 111.3 82 61.0
Sp4g18640 Schrenkiella parvula HOM05D004809 ORTHO05D006732 4.1e-23 111.3 72 70.8
CARHR130660 Cardamine hirsuta HOM05D004809 ORTHO05D006732 5.3e-23 110.9 71 67.6
Thhalv10017936m.g Eutrema salsugineum HOM05D004809 ORTHO05D006732 5.3e-23 110.9 72 70.8
VMungo0720G0319 Vigna mungo HOM05D004809 ORTHO05D006732 7.0e-23 110.5 77 61.0
AT2G36360 Arabidopsis thaliana HOM05D004809 ORTHO05D006732 9.1e-23 110.2 71 67.6
Phvul.007G104300 Phaseolus vulgaris HOM05D004809 ORTHO05D006732 9.1e-23 110.2 77 59.7
Sabra08G0016600 Salix brachista HOM05D004809 ORTHO05D006732 9.1e-23 110.2 72 65.3
AL4G32520 Arabidopsis lyrata HOM05D004809 ORTHO05D006732 1.2e-22 109.8 69 68.1
Oeu015034.1 Olea europaea HOM05D004809 ORTHO05D006732 1.2e-22 109.8 86 55.8
Os03g0835800 Oryza sativa ssp. japonica HOM05D004809 ORTHO05D006732 1.6e-22 109.4 63 76.2
SMO174G0255 Selaginella moellendorffii HOM05D004809 ORTHO05D006732 1.6e-22 109.4 68 70.6
ATR0820G085 Amborella trichopoda HOM05D004809 ORTHO05D006732 3.5e-22 108.2 89 57.3
Aqoxy4G02860 Aquilegia oxysepala HOM05D004809 ORTHO05D006732 7.7e-22 107.1 72 65.3
CANSAT56G2003 Cannabis sativa HOM05D004809 ORTHO05D006732 7.7e-22 107.1 77 63.6
Potri.008G024700 Populus trichocarpa HOM05D004809 ORTHO05D006732 1.0e-21 106.7 73 68.5
unitig_0.g851 Utricularia gibba HOM05D004809 ORTHO05D006732 1.0e-21 106.7 65 69.2
SalBow6G1224 Salvia bowleyana HOM05D004809 ORTHO05D006732 1.7e-21 105.9 69 68.1
HanXRQChr05g0146831 Helianthus annuus HOM05D004809 ORTHO05D006732 2.2e-21 105.5 86 59.3
Lsat_1_v5_gn_0_7340 Lactuca sativa HOM05D004809 ORTHO05D006732 3.8e-21 104.8 58 79.3
RcHm_v2.0_Chr1g0333981 Rosa chinensis HOM05D004809 ORTHO05D006732 8.5e-21 103.6 58 75.9
SGA_v2.0_scaffold62G21351 Striga asiatica HOM05D004809 ORTHO05D006732 1.9e-20 102.4 72 63.9
Lsat_1_v5_gn_3_126940 Lactuca sativa HOM05D004809 ORTHO05D006732 4.2e-20 101.3 58 77.6
Lsat_1_v5_gn_9_14041 Lactuca sativa HOM05D004809 ORTHO05D006732 1.2e-19 99.8 58 75.9
CBR_g30411 Chara braunii HOM05D004809 ORTHO05D006732 2.1e-19 99.0 76 57.9
Mapoly0052s0089 Marchantia polymorpha HOM05D004809 ORTHO05D006732 4.7e-19 97.8 91 50.5
Pp3c12_16110 Physcomitrium patens HOM05D004809 ORTHO05D006732 1.4e-18 96.3 63 66.7
Pp3c12_16113 Physcomitrium patens HOM05D004809 ORTHO05D006732 1.4e-18 96.3 63 66.7
AagrBONN_evm.TU.Sc2ySwM_228.3607 Anthoceros agrestis HOM05D004809 ORTHO05D006732 5.7e-17 90.9 62 59.7
MELO3C012363.2 Cucumis melo HOM05D004809 ORTHO05D006732 1.3e-16 89.7 51 74.5
Nitab4.5_0005390g0010 Nicotiana tabacum HOM05D004809 ORTHO05D006732 2.8e-16 88.6 84 48.8
FvH4_5g38190 Fragaria vesca HOM05D004809 ORTHO05D006732 7.0e-15 84.0 50 74.0
SHI21283 Sapria himalayana HOM05D004809 ORTHO05D006732 7.0e-15 84.0 51 66.7
CsaV3_7G016260 Cucumis sativus L. HOM05D004809 ORTHO05D006732 4.5e-14 81.3 52 67.3
Lsat_1_v5_gn_4_48181 Lactuca sativa HOM05D004809 ORTHO05D006732 4.5e-06 54.7 102 31.4


User provided reference genes

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