Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06901 Selenicereus undatus HOM05D006254 ORTHO05D007409 5.7e-183 644.0 307 100.0
EL10Ac4g08984 Beta vulgaris HOM05D006254 ORTHO05D007409 1.6e-100 370.2 263 64.6
AUR62036036 Chenopodium quinoa HOM05D006254 ORTHO05D007409 1.3e-97 360.5 236 67.8
Dinv02479 Davidia involucrata HOM05D006254 ORTHO05D007409 5.3e-96 355.1 263 62.4
Manes.12G085200 Manihot esculenta HOM05D006254 ORTHO05D007409 8.4e-94 347.8 274 60.2
QL10p038598 Quercus lobata HOM05D006254 ORTHO05D007409 1.4e-93 347.1 263 60.1
CiPaw.04G178100 Carya illinoinensis HOM05D006254 ORTHO05D007409 9.3e-93 344.4 263 60.1
Sc20g0000720 Simmondsia chinensis HOM05D006254 ORTHO05D007409 1.2e-92 344.0 272 60.3
Prupe.6G059200 Prunus persica HOM05D006254 ORTHO05D007409 1.6e-92 343.6 263 60.1
Potri.004G137900 Populus trichocarpa HOM05D006254 ORTHO05D007409 1.7e-91 340.1 293 54.6
TWI31G0260 Tripterygium wilfordii HOM05D006254 ORTHO05D007409 8.7e-91 337.8 264 60.2
MD03G1072300 Malus domestica HOM05D006254 ORTHO05D007409 2.5e-90 336.3 263 58.2
PSO017G1045 Papaver somniferum HOM05D006254 ORTHO05D007409 4.3e-90 335.5 263 58.2
CSS0012450 Camellia sinensis var. sinensis HOM05D006254 ORTHO05D007409 1.3e-89 334.0 263 57.8
TAR628G1014 Trochodendron aralioides HOM05D006254 ORTHO05D007409 2.1e-89 333.2 263 58.9
Lsat_1_v5_gn_1_78401 Lactuca sativa HOM05D006254 ORTHO05D007409 6.2e-89 331.6 265 57.4
CANSAT54G2690 Cannabis sativa HOM05D006254 ORTHO05D007409 1.8e-88 330.1 263 57.0
ECA248G3109 Erigeron canadensis HOM05D006254 ORTHO05D007409 3.1e-88 329.3 263 58.6
Cfa002251 Carpinus fangiana HOM05D006254 ORTHO05D007409 4.5e-87 325.5 263 57.8
GSVIVG01000233001 Vitis vinifera HOM05D003183 ORTHO05D007409 9.9e-87 324.3 263 56.7
Eucgr.I00013 Eucalyptus grandis HOM05D006254 ORTHO05D007409 1.3e-86 323.9 263 57.4
MELO3C033099.2 Cucumis melo HOM05D006254 ORTHO05D007409 1.1e-85 320.9 263 56.7
Gohir.D04G040400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 1.1e-85 320.9 241 59.3
SGA_v2.0_scaffold54G19570 Striga asiatica HOM05D006254 ORTHO05D007409 2.4e-85 319.7 299 51.2
MSTRG.23507 Avicennia marina HOM05D006254 ORTHO05D007409 2.7e-84 316.2 284 52.5
Cc07_g20930 Coffea canephora HOM05D006254 ORTHO05D007409 2.7e-84 316.2 327 50.2
CsaV3_4G030320 Cucumis sativus L. HOM05D006254 ORTHO05D007409 4.6e-84 315.5 263 55.5
PGR119G0951 Punica granatum HOM05D006254 ORTHO05D007409 7.9e-84 314.7 263 54.4
HanXRQChr01g0017761 Helianthus annuus HOM05D006254 ORTHO05D007409 1.0e-83 314.3 287 54.7
Lalb_Chr12g0202731 Lupinus albus HOM05D006254 ORTHO05D007409 1.0e-83 314.3 263 55.1
TPR.G12754 Trifolium pratense HOM05D006254 ORTHO05D007409 1.8e-83 313.5 263 55.1
Aqoxy5G02669 Aquilegia oxysepala HOM05D006254 ORTHO05D007409 3.9e-83 312.4 261 57.1
Medtr8g095410 Medicago truncatula HOM05D006254 ORTHO05D007409 8.7e-83 311.2 263 54.8
Gohir.A05G375400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 1.5e-82 310.5 263 54.4
Gorai.012G045500 Gossypium raimondii HOM05D006254 ORTHO05D007409 5.6e-82 308.5 263 54.4
Ca_17588_v3 Cicer arietinum L. HOM05D006254 ORTHO05D007409 7.4e-82 308.1 263 55.1
Sopen03g020950 Solanum pennellii HOM05D006254 ORTHO05D007409 2.8e-81 306.2 262 54.2
FAN25G1911 Fragaria x ananassa HOM05D006254 ORTHO05D007409 4.8e-81 305.4 287 50.5
Solyc03g078230.3 Solanum lycopersicum HOM05D006254 ORTHO05D007409 6.2e-81 305.1 262 54.2
Oeu011007.1 Olea europaea HOM05D006254 ORTHO05D007409 1.1e-80 304.3 263 52.9
FvH4_3g38370 Fragaria vesca HOM05D006254 ORTHO05D007409 1.8e-80 303.5 263 53.6
FAN11G0663 Fragaria x ananassa HOM05D006254 ORTHO05D007409 1.8e-80 303.5 262 53.8
FAN21G3787 Fragaria x ananassa HOM05D006254 ORTHO05D007409 4.0e-80 302.4 263 52.5
Rhsim09G0131600 Rhododendron simsii HOM05D006254 ORTHO05D007409 4.0e-80 302.4 279 52.7
Peaxi162Scf00030g00012 Petunia axillaris HOM05D006254 ORTHO05D007409 4.5e-79 298.9 299 50.2
THA.LOC104803663 Tarenaya hassleriana HOM05D006254 ORTHO05D007409 5.8e-79 298.5 263 52.1
arahy.Tifrunner.gnm1.ann1.ZNEY68 Arachis hypogaea HOM05D006254 ORTHO05D007409 1.4e-77 293.9 263 52.9
VMungo0251G0787 Vigna mungo HOM05D006254 ORTHO05D007409 1.4e-77 293.9 277 50.9
Psat7g040840 Pisum sativum HOM05D006254 ORTHO05D007409 2.5e-77 293.1 263 52.1
HanXRQChr01g0017751 Helianthus annuus HOM05D006254 ORTHO05D007409 4.2e-77 292.4 265 53.2
arahy.Tifrunner.gnm1.ann1.9169VS Arachis hypogaea HOM05D006254 ORTHO05D007409 5.5e-77 292.0 263 52.9
Migut.H00776 Erythranthe guttata HOM05D006254 ORTHO05D007409 2.7e-76 289.7 263 50.2
Thhalv10016597m.g Eutrema salsugineum HOM05D006254 ORTHO05D007409 3.5e-76 289.3 263 52.5
Carub.0001s3633 Capsella rubella HOM05D006254 ORTHO05D007409 1.8e-75 287.0 262 51.9
vmacro10394 Vaccinium macrocarpon HOM05D006254 ORTHO05D007409 8.7e-75 284.6 298 50.0
Lj4g0026953 Lotus japonicus HOM05D006254 ORTHO05D007409 1.5e-74 283.9 263 51.7
AL1G53850 Arabidopsis lyrata HOM05D006254 ORTHO05D007409 3.3e-74 282.7 263 51.3
Migut.H00777 Erythranthe guttata HOM05D006254 ORTHO05D007409 3.3e-74 282.7 245 51.8
AT1G47570 Arabidopsis thaliana HOM05D006254 ORTHO05D007409 2.8e-73 279.6 263 50.6
Sp4g18960 Schrenkiella parvula HOM05D006254 ORTHO05D007409 2.8e-73 279.6 263 49.8
BcaB02g09339 Brassica carinata HOM05D006254 ORTHO05D007409 3.1e-72 276.2 263 49.8
Hma1.2p1_0057F.1_g032170 Hydrangea macrophylla HOM05D006254 ORTHO05D007409 3.1e-72 276.2 189 62.4
BcaB02g09340 Brassica carinata HOM05D006254 ORTHO05D007409 4.1e-72 275.8 263 49.4
CARHR037200 Cardamine hirsuta HOM05D006254 ORTHO05D007409 9.0e-72 274.6 261 50.2
A05p09180 Brassica napus HOM05D006254 ORTHO05D007409 2.6e-71 273.1 264 50.0
Zm00001eb200940 Zea mays HOM05D006254 ORTHO05D007409 4.5e-71 272.3 257 49.4
BcaC02g11789 Brassica carinata HOM05D006254 ORTHO05D007409 5.9e-71 271.9 264 49.6
C04p11350 Brassica napus HOM05D006254 ORTHO05D007409 5.9e-71 271.9 264 49.6
Ah.04g163200 Amaranthus hybridus HOM05D006254 ORTHO05D007409 3.8e-70 269.2 263 51.0
Aa31LG5G9250 Aethionema arabicum HOM05D006254 ORTHO05D007409 5.0e-70 268.9 262 49.2
MD00G1120300 Malus domestica HOM05D006254 ORTHO05D007409 4.2e-69 265.8 238 54.2
BolC4t22773H Brassica oleracea HOM05D006254 ORTHO05D007409 5.5e-69 265.4 270 48.5
Os11g0175500 Oryza sativa ssp. japonica HOM05D006254 ORTHO05D007409 2.7e-68 263.1 287 43.6
RcHm_v2.0_Chr5g0068971 Rosa chinensis HOM05D006254 ORTHO05D007409 2.7e-68 263.1 262 47.3
BolC4t22794H Brassica oleracea HOM05D006254 ORTHO05D007409 1.0e-67 261.2 287 45.3
BraA05t19873Z Brassica rapa HOM05D006254 ORTHO05D007409 3.9e-67 259.2 287 46.0
Nitab4.5_0012738g0010 Nicotiana tabacum HOM05D006254 ORTHO05D007409 7.4e-66 255.0 208 53.8
DCAR_009615 Daucus carota HOM05D006254 ORTHO05D007409 1.6e-65 253.8 229 53.3
FAN16G1494 Fragaria x ananassa HOM05D006254 ORTHO05D007409 5.3e-64 248.8 241 49.8
MD11G1078600 Malus domestica HOM05D006254 ORTHO05D007409 1.0e-62 244.6 317 43.2
Phvul.002G279100 Phaseolus vulgaris HOM05D006254 ORTHO05D007409 5.0e-62 242.3 242 50.0
Cpa.g.sc138.23 Carica papaya HOM05D006254 ORTHO05D007409 1.2e-55 221.1 160 60.0
Thecc.01G235200 Theobroma cacao HOM05D006254 ORTHO05D007409 8.5e-54 214.9 208 49.5
Ciclev10024761m.g Citrus clementina HOM05D003183 ORTHO05D003697 4.2e-53 212.6 187 56.7
unitig_65.g29879 Utricularia gibba HOM05D006254 ORTHO05D007409 7.2e-53 211.8 286 40.6
Glyma.05G198100 Glycine max HOM05D006254 ORTHO05D007409 2.6e-50 203.4 204 49.5
MD00G1120800 Malus domestica HOM05D006254 ORTHO05D007409 3.7e-49 199.5 156 58.3
MD11G1077300 Malus domestica HOM05D006254 ORTHO05D007409 6.3e-49 198.7 178 52.8
MD11G1078400 Malus domestica HOM05D006254 ORTHO05D007409 3.1e-48 196.4 156 57.7
unitig_62.g23450 Utricularia gibba HOM05D006254 ORTHO05D007409 7.7e-47 191.8 327 35.5
Sed0010974 Sechium edule HOM05D006254 ORTHO05D007409 2.2e-46 190.3 187 50.8
Nitab4.5_0000004g0230 Nicotiana tabacum HOM05D006254 ORTHO05D007409 8.0e-44 181.8 299 37.5
Atru.chr4.972 Acer truncatum HOM05D006254 ORTHO05D007409 2.3e-43 180.3 145 57.2
Sabra04G0089300 Salix brachista HOM05D006254 ORTHO05D007409 4.0e-43 179.5 149 53.7
RcHm_v2.0_Chr2g0157071 Rosa chinensis HOM05D006254 ORTHO05D007409 1.7e-41 174.1 169 49.1
CDE06G2483 Ceratophyllum demersum HOM05D006254 ORTHO05D007409 1.8e-40 170.6 205 43.9
HPP92_016136 Vanilla planifolia HOM05D006254 ORTHO05D007409 5.9e-39 165.6 154 46.8
Actinidia34771 Actinidia chinensis HOM05D000969 ORTHO05D000899 2.5e-37 160.2 137 54.0
Haze_25432 Corylus avellana HOM05D006254 ORTHO05D007409 9.4e-37 158.3 244 36.5
Haze_25431 Corylus avellana HOM05D006254 ORTHO05D007409 2.1e-36 157.1 244 36.5
Mapoly0003s0196 Marchantia polymorpha HOM05D006254 ORTHO05D007409 3.8e-30 136.3 185 34.6
AagrBONN_evm.TU.Sc2ySwM_117.2849 Anthoceros agrestis HOM05D006254 ORTHO05D007409 8.5e-30 135.2 274 29.9
RcHm_v2.0_Chr2g0157061 Rosa chinensis HOM05D006254 ORTHO05D007409 3.2e-29 133.3 83 67.5
MD11G1077500 Malus domestica HOM05D006254 ORTHO05D007409 2.1e-28 130.6 111 55.0
ATR0584G026 Amborella trichopoda HOM05D006254 ORTHO05D007409 2.8e-28 130.2 138 41.3
Duzib264G1273 Durio zibethinus HOM05D006254 ORTHO05D007409 1.4e-27 127.9 72 72.2
AUR62004819 Chenopodium quinoa HOM05D006254 ORTHO05D007409 7.5e-26 122.1 353 28.9
MD11G1077800 Malus domestica HOM05D006254 ORTHO05D007409 9.8e-26 121.7 80 66.2
CBR_g38543 Chara braunii HOM05D006254 ORTHO05D007409 3.1e-24 116.7 286 28.3
GSVIVG01038034001 Vitis vinifera HOM05D001605 ORTHO05D007409 3.5e-23 113.2 100 48.0
Actinidia38917 Actinidia chinensis HOM05D006254 ORTHO05D007409 1.7e-22 110.9 131 45.8
Nn1g08418 Nelumbo nucifera HOM05D006254 ORTHO05D007409 2.2e-17 94.0 87 49.4
AagrBONN_evm.TU.Sc2ySwM_228.4097 Anthoceros agrestis HOM05D006254 ORTHO05D007409 7.8e-15 85.5 229 25.8
Actinidia38918 Actinidia chinensis HOM05D006254 ORTHO05D007409 1.6e-12 77.8 42 78.6
SEGI_09568 Sequoiadendron giganteum HOM05D006254 ORTHO05D007409 3.7e-09 66.6 109 35.8
arahy.Tifrunner.gnm1.ann1.SX6F5A Arachis hypogaea HOM05D006254 ORTHO05D007409 6.0e-07 59.3 80 41.2


User provided reference genes

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