Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06889 Selenicereus undatus HOM05D008075 ORTHO05D010208 0.0e+00 1668.7 852 100.0
AUR62039042 Chenopodium quinoa HOM05D008075 ORTHO05D010208 3.1e-146 523.5 870 43.0
AUR62004796 Chenopodium quinoa HOM05D008075 ORTHO05D010208 6.7e-141 505.8 871 42.7
EL10Ac4g08956 Beta vulgaris HOM05D008075 ORTHO05D010208 1.5e-140 504.6 839 44.6
Ah.06g191710 Amaranthus hybridus HOM05D008075 ORTHO05D010208 7.6e-137 492.3 856 42.4
Sc09g0004370 Simmondsia chinensis HOM05D008075 ORTHO05D010208 3.7e-75 287.3 888 34.2
Dinv08171 Davidia involucrata HOM05D008075 ORTHO05D010208 2.1e-62 245.0 875 30.7
GSVIVG01022404001 Vitis vinifera HOM05D008075 ORTHO05D010208 7.1e-58 229.9 869 30.4
MBI03_g11141_MAGBIO Magnolia biondii HOM05D008075 ORTHO05D010208 3.0e-56 224.6 330 46.1
TAR376G0152 Trochodendron aralioides HOM05D008075 ORTHO05D010208 1.9e-55 221.9 324 47.2
Potri.004G140000 Populus trichocarpa HOM05D008075 ORTHO05D010208 9.6e-55 219.5 856 31.2
Cc02_g33950 Coffea canephora HOM05D008075 ORTHO05D010208 4.7e-54 217.2 216 60.2
Nn1g08564 Nelumbo nucifera HOM05D008075 ORTHO05D010208 4.7e-54 217.2 216 56.0
CSS0037312 Camellia sinensis var. sinensis HOM05D008075 ORTHO05D010208 2.6e-52 211.5 375 40.0
CiPaw.03G254600 Carya illinoinensis HOM05D008075 ORTHO05D010208 9.9e-52 209.5 310 46.5
Nn5g27987 Nelumbo nucifera HOM05D008075 ORTHO05D010208 9.9e-52 209.5 216 55.1
THA.LOC104819473 Tarenaya hassleriana HOM05D008075 ORTHO05D010208 1.3e-51 209.1 218 55.0
ATR0171G010 Amborella trichopoda HOM05D008075 ORTHO05D010208 6.4e-51 206.8 310 44.2
arahy.Tifrunner.gnm1.ann1.F3CBX5 Arachis hypogaea HOM05D008075 ORTHO05D010208 1.9e-50 205.3 249 49.0
Sabra04G0092100 Salix brachista HOM05D008075 ORTHO05D010208 1.9e-50 205.3 894 30.3
Nitab4.5_0005586g0040 Nicotiana tabacum HOM05D008075 ORTHO05D010208 5.4e-50 203.8 248 50.4
Ciclev10024878m.g Citrus clementina HOM05D008075 ORTHO05D010208 1.2e-49 202.6 900 29.0
Lj4g0013275 Lotus japonicus HOM05D008075 ORTHO05D010208 1.2e-49 202.6 851 29.5
TWI75G0788 Tripterygium wilfordii HOM05D008075 ORTHO05D010208 1.6e-49 202.2 455 37.6
Solyc08g080000.3 Solanum lycopersicum HOM05D008075 ORTHO05D010208 3.5e-49 201.1 307 43.6
PSO782G2813 Papaver somniferum HOM05D008075 ORTHO05D010208 7.8e-49 199.9 523 35.0
SGA_v2.0_scaffold54G19596 Striga asiatica HOM05D008075 ORTHO05D010208 1.0e-48 199.5 309 43.0
Glyma.05G197100 Glycine max HOM05D008075 ORTHO05D010208 2.3e-48 198.4 877 28.8
Peaxi162Scf00658g00065 Petunia axillaris HOM05D008075 ORTHO05D010208 2.3e-48 198.4 209 53.6
Aqoxy2G00609 Aquilegia oxysepala HOM05D008075 ORTHO05D010208 5.1e-48 197.2 230 53.9
arahy.Tifrunner.gnm1.ann1.BIR6X5 Arachis hypogaea HOM05D008075 ORTHO05D010208 8.7e-48 196.4 227 50.2
Sopen08g028360 Solanum pennellii HOM05D008075 ORTHO05D010208 1.9e-47 195.3 307 43.0
PGSC0003DMG400022727 Solanum tuberosum HOM05D008075 ORTHO05D010208 1.9e-47 195.3 311 42.4
HPP92_002184 Vanilla planifolia HOM05D008075 ORTHO05D010208 1.9e-47 195.3 231 50.6
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 2.5e-47 194.9 233 51.9
Migut.H00807 Erythranthe guttata HOM05D008075 ORTHO05D010208 4.3e-47 194.1 308 44.8
Os03g0703300 Oryza sativa ssp. japonica HOM05D008075 ORTHO05D010208 9.6e-47 193.0 174 59.8
HanXRQChr15g0468991 Helianthus annuus HOM05D008075 ORTHO05D010208 1.3e-46 192.6 294 42.5
Lsat_1_v5_gn_5_69300 Lactuca sativa HOM05D008075 ORTHO05D010208 1.6e-46 192.2 173 57.8
ECA233G5565 Erigeron canadensis HOM05D008075 ORTHO05D010208 2.8e-46 191.4 300 44.0
Rhsim08G0001000 Rhododendron simsii HOM05D008075 ORTHO05D010208 2.8e-46 191.4 347 41.2
Psat7g041720 Pisum sativum HOM05D008075 ORTHO05D010208 4.8e-46 190.7 332 40.1
QL10p040186 Quercus lobata HOM05D008075 ORTHO05D010208 3.1e-45 188.0 911 27.9
Zm00001eb054280 Zea mays HOM05D008075 ORTHO05D010208 5.3e-45 187.2 203 54.7
PSO170G3563 Papaver somniferum HOM05D008075 ORTHO05D010208 1.5e-44 185.7 572 32.9
TPR.G33422 Trifolium pratense HOM05D008075 ORTHO05D010208 5.8e-44 183.7 900 28.3
Manes.12G084200 Manihot esculenta HOM05D008075 ORTHO05D010208 7.6e-44 183.3 840 28.8
Phvul.002G277500 Phaseolus vulgaris HOM05D008075 ORTHO05D010208 2.2e-43 181.8 840 27.9
Glyma.08G004500 Glycine max HOM05D008075 ORTHO05D010208 4.9e-43 180.6 875 27.3
VMungo0251G2353 Vigna mungo HOM05D008075 ORTHO05D010208 2.4e-42 178.3 872 29.6
Medtr8g095160 Medicago truncatula HOM05D008075 ORTHO05D010208 5.4e-42 177.2 875 27.4
Nitab4.5_0000947g0070 Nicotiana tabacum HOM05D008075 ORTHO05D010208 1.2e-41 176.0 215 50.2
Lalb_Chr12g0202841 Lupinus albus HOM05D008075 ORTHO05D010208 1.8e-40 172.2 299 40.8
SalBow1G7185 Salvia bowleyana HOM05D008075 ORTHO05D010208 2.8e-38 164.9 850 26.0
SEGI_31365 Sequoiadendron giganteum HOM05D008075 ORTHO05D010208 2.9e-35 154.8 187 42.8
Ca_17596_v3 Cicer arietinum L. HOM05D000484 ORTHO05D010208 1.1e-34 152.9 838 27.8
SMO266G0073 Selaginella moellendorffii HOM05D008075 ORTHO05D010208 6.7e-32 143.7 169 45.0
Mapoly0089s0038 Marchantia polymorpha HOM05D008075 ORTHO05D010208 1.2e-28 132.9 248 32.3
CAN.G630.6 Capsicum annuum HOM05D008075 ORTHO05D010208 2.2e-27 128.6 193 43.0
Pp3c16_21630 Physcomitrium patens HOM05D008075 ORTHO05D010208 2.9e-27 128.3 259 34.0
Pp3c6_3110 Physcomitrium patens HOM05D008075 ORTHO05D010208 7.1e-26 123.6 286 32.5
Pp3c6_900 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.8e-21 109.0 272 30.1
Pp3c6_920 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.8e-21 109.0 272 30.1
Nn5g27981 Nelumbo nucifera HOM05D008075 ORTHO05D010208 5.0e-19 100.9 138 42.8
VMungo0251G2339 Vigna mungo HOM05D008075 ORTHO05D010208 5.1e-16 90.9 64 70.3
AagrBONN_evm.TU.Sc2ySwM_362.1056 Anthoceros agrestis HOM05D008075 ORTHO05D010208 1.2e-12 79.7 134 36.6
CBR_g31168 Chara braunii HOM05D008075 ORTHO05D010208 2.6e-12 78.6 150 31.3
HanXRQChr07g0199571 Helianthus annuus HOM05D008075 ORTHO05D010208 5.5e-10 70.9 47 70.2
Nn5g28099 Nelumbo nucifera HOM05D004492 ORTHO05D005602 2.3e-08 65.5 58 55.2
HanXRQChr10g0307451 Helianthus annuus HOM05D008075 ORTHO05D010208 5.1e-08 64.3 48 62.5
CBR_g10951 Chara braunii HOM05D008075 ORTHO05D010208 8.2e-06 57.0 87 34.5


User provided reference genes

Program Settings