Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06873 Selenicereus undatus HOM05D000010 ORTHO05D000063 1.1e-192 676.4 329 100.0
EL10Ac4g08934 Beta vulgaris HOM05D000010 ORTHO05D000063 1.3e-60 237.7 369 44.2
Sc09g0004480 Simmondsia chinensis HOM05D000010 ORTHO05D000063 1.5e-56 224.2 360 43.1
AUR62003400 Chenopodium quinoa HOM05D000010 ORTHO05D000063 1.8e-54 217.2 358 43.9
AUR62004778 Chenopodium quinoa HOM05D000010 ORTHO05D000063 7.7e-53 211.8 362 43.4
Hund22199 Selenicereus undatus HOM05D000010 ORTHO05D000063 7.2e-51 205.3 229 55.5
Ah.06g191640 Amaranthus hybridus HOM05D000010 ORTHO05D000063 1.4e-46 191.0 334 41.9
Hma1.2p1_0034F.1_g021410 Hydrangea macrophylla HOM05D000010 ORTHO05D000063 1.0e-33 148.3 426 30.3
Sc20g0000800 Simmondsia chinensis HOM05D000010 ORTHO05D000063 6.8e-33 145.6 289 38.8
Lj4C252T1 Lonicera japonica HOM05D000010 ORTHO05D000063 8.9e-33 145.2 381 32.5
GSVIVG01035214001 Vitis vinifera HOM05D000010 ORTHO05D000063 1.0e-28 131.7 281 33.1
Cfa007745 Carpinus fangiana HOM05D000189 ORTHO05D000474 5.0e-28 129.4 293 33.1
Manes.02G081200 Manihot esculenta HOM05D000010 ORTHO05D000063 5.0e-28 129.4 288 34.7
QL02p064244 Quercus lobata HOM05D000010 ORTHO05D000063 1.1e-27 128.3 316 33.5
CSS0038294 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000063 1.5e-27 127.9 421 28.5
CSS0049992 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000063 3.3e-27 126.7 421 28.5
Lj6g0023621 Lotus japonicus HOM05D000010 ORTHO05D000063 9.5e-27 125.2 414 29.2
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 2.1e-26 124.0 409 29.3
Nitab4.5_0002648g0020 Nicotiana tabacum HOM05D000010 ORTHO05D000063 2.8e-26 123.6 277 31.8
Haze_14328 Corylus avellana HOM05D000010 ORTHO05D000063 3.6e-26 123.2 261 33.7
Actinidia17163 Actinidia chinensis HOM05D000010 ORTHO05D000063 4.7e-26 122.9 299 33.8
MD17G1286600 Malus domestica HOM05D000010 ORTHO05D000063 4.7e-26 122.9 444 25.7
Actinidia40415 Actinidia chinensis HOM05D000010 ORTHO05D000063 8.0e-26 122.1 253 33.6
Medtr3g064580 Medicago truncatula HOM05D000010 ORTHO05D000063 8.0e-26 122.1 413 28.3
Thecc.04G059900 Theobroma cacao HOM05D000010 ORTHO05D000063 8.0e-26 122.1 265 34.7
MD09G1279900 Malus domestica HOM05D000010 ORTHO05D000063 1.8e-25 120.9 437 25.6
Nn4g24728 Nelumbo nucifera HOM05D000010 ORTHO05D000063 3.1e-25 120.2 320 29.7
DCAR_014143 Daucus carota HOM05D000010 ORTHO05D000063 4.0e-25 119.8 286 32.9
Potri.004G081000 Populus trichocarpa HOM05D000010 ORTHO05D000063 6.8e-25 119.0 319 32.6
Glyma.18G043900 Glycine max HOM05D000010 ORTHO05D000063 1.5e-24 117.9 423 28.4
Glyma.14G210000 Glycine max HOM05D000010 ORTHO05D000063 2.0e-24 117.5 394 30.2
Prupe.3G014400 Prunus persica HOM05D000010 ORTHO05D000063 3.4e-24 116.7 313 30.7
COL.COLO4_20040 Corchorus olitorius HOM05D000010 ORTHO05D000063 4.4e-24 116.3 297 32.0
PGSC0003DMG400021474 Solanum tuberosum HOM05D000010 ORTHO05D000063 4.4e-24 116.3 304 31.6
Glyma.02G240500 Glycine max HOM05D000010 ORTHO05D000063 5.8e-24 115.9 398 29.1
Solyc02g036430.2 Solanum lycopersicum HOM05D000010 ORTHO05D000063 5.8e-24 115.9 305 32.5
Gorai.004G048200 Gossypium raimondii HOM05D000010 ORTHO05D000063 9.8e-24 115.2 293 30.0
Rhsim08G0021400 Rhododendron simsii HOM05D000010 ORTHO05D000063 9.8e-24 115.2 393 27.0
arahy.Tifrunner.gnm1.ann1.XKF840 Arachis hypogaea HOM05D000010 ORTHO05D000063 2.2e-23 114.0 413 27.6
arahy.Tifrunner.gnm1.ann1.1GPE0T Arachis hypogaea HOM05D000010 ORTHO05D000063 2.9e-23 113.6 413 27.4
Gohir.D08G048700 Gossypium hirsutum HOM05D000010 ORTHO05D000063 4.9e-23 112.8 292 29.8
Cc07_g12760 Coffea canephora HOM05D000010 ORTHO05D000063 6.4e-23 112.5 416 27.6
Gohir.A08G038500 Gossypium hirsutum HOM05D000010 ORTHO05D000063 6.4e-23 112.5 304 28.9
HanXRQChr14g0443401 Helianthus annuus HOM05D000010 ORTHO05D000063 6.4e-23 112.5 392 27.3
Nitab4.5_0013401g0020 Nicotiana tabacum HOM05D000010 ORTHO05D000063 8.3e-23 112.1 416 27.9
Sabra04G0053800 Salix brachista HOM05D000010 ORTHO05D000063 8.3e-23 112.1 276 33.0
Sabra17G0117600 Salix brachista HOM05D000010 ORTHO05D000063 1.4e-22 111.3 308 33.1
TAR629G2502 Trochodendron aralioides HOM05D000010 ORTHO05D000063 1.4e-22 111.3 320 30.0
Phvul.006G087000 Phaseolus vulgaris HOM05D000010 ORTHO05D000063 1.9e-22 110.9 413 25.7
Dinv28245 Davidia involucrata HOM05D000010 ORTHO05D000063 2.4e-22 110.5 267 32.6
Oeu032294.1 Olea europaea HOM05D000010 ORTHO05D000063 4.1e-22 109.8 305 31.5
TAR227G0002 Trochodendron aralioides HOM05D000010 ORTHO05D000063 4.1e-22 109.8 304 30.6
LjContig00141g0019933 Lotus japonicus HOM05D000010 ORTHO05D000063 5.4e-22 109.4 429 26.6
Duzib138G1680 Durio zibethinus HOM05D000010 ORTHO05D000063 7.0e-22 109.0 312 29.5
CAN.G269.9 Capsicum annuum HOM05D000010 ORTHO05D000063 1.2e-21 108.2 310 30.3
Potri.017G139500 Populus trichocarpa HOM05D000010 ORTHO05D000063 3.5e-21 106.7 319 31.3
vmacro18509 Vaccinium macrocarpon HOM05D000010 ORTHO05D000063 3.5e-21 106.7 403 26.8
Ciclev10011293m.g Citrus clementina HOM05D000010 ORTHO05D000063 4.6e-21 106.3 383 27.7
Ah.04g163000 Amaranthus hybridus HOM05D001733 ORTHO05D001882 7.8e-21 105.5 251 35.1
FAN26G2900 Fragaria x ananassa HOM05D000010 ORTHO05D000063 7.8e-21 105.5 325 28.9
CiPaw.03G075700 Carya illinoinensis HOM05D000010 ORTHO05D000063 1.0e-20 105.1 326 29.4
FAN28G1629 Fragaria x ananassa HOM05D000010 ORTHO05D000063 1.0e-20 105.1 330 28.2
Glyma.11G212400 Glycine max HOM05D000010 ORTHO05D000063 1.0e-20 105.1 321 29.6
FvH4_1g27330 Fragaria vesca HOM05D000010 ORTHO05D000063 1.3e-20 104.8 326 28.5
Manes.01G123600 Manihot esculenta HOM05D000010 ORTHO05D000063 1.3e-20 104.8 289 30.4
SalBow5G4598 Salvia bowleyana HOM05D000010 ORTHO05D000063 3.9e-20 103.2 261 33.3
SalBow5G5382 Salvia bowleyana HOM05D000010 ORTHO05D000063 3.9e-20 103.2 261 33.3
FAN19G0740 Fragaria x ananassa HOM05D000010 ORTHO05D000063 6.6e-20 102.4 327 27.8
VMungo0647G1689 Vigna mungo HOM05D000010 ORTHO05D000063 1.1e-19 101.7 269 30.9
Medtr5g076850 Medicago truncatula HOM05D000010 ORTHO05D000063 1.5e-19 101.3 252 31.3
SGA_v2.0_scaffold45G17109 Striga asiatica HOM05D000010 ORTHO05D000063 1.5e-19 101.3 254 34.3
CsaV3_5G020440 Cucumis sativus L. HOM05D000010 ORTHO05D000063 1.9e-19 100.9 291 32.6
FAN23G0511 Fragaria x ananassa HOM05D000010 ORTHO05D000063 1.9e-19 100.9 324 28.7
Oeu012319.2 Olea europaea HOM05D000010 ORTHO05D000063 1.9e-19 100.9 283 28.3
RcHm_v2.0_Chr3g0488761 Rosa chinensis HOM05D000010 ORTHO05D000063 1.9e-19 100.9 282 30.5
CAN.G1681.12 Capsicum annuum HOM05D000010 ORTHO05D000063 3.3e-19 100.1 377 28.6
Gohir.D11G176800 Gossypium hirsutum HOM05D000010 ORTHO05D000063 4.3e-19 99.8 285 29.5
Gorai.007G188800 Gossypium raimondii HOM05D000010 ORTHO05D000063 7.3e-19 99.0 285 29.5
Lalb_Chr10g0104051 Lupinus albus HOM05D000010 ORTHO05D000063 7.3e-19 99.0 273 28.9
Eucgr.F02910 Eucalyptus grandis HOM05D000010 ORTHO05D000063 1.2e-18 98.2 291 31.3
PSO782G4912 Papaver somniferum HOM05D000010 ORTHO05D000063 2.1e-18 97.4 320 28.8
Sed0019689 Sechium edule HOM05D000010 ORTHO05D000063 2.8e-18 97.1 277 32.9
TWI53G0309 Tripterygium wilfordii HOM05D000010 ORTHO05D000063 2.8e-18 97.1 312 30.4
arahy.Tifrunner.gnm1.ann1.JBNT97 Arachis hypogaea HOM05D000010 ORTHO05D000063 3.6e-18 96.7 260 29.6
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 3.6e-18 96.7 274 31.0
ClCG01G008530 Citrullus lanatus HOM05D000010 ORTHO05D000063 4.7e-18 96.3 291 32.6
Phvul.008G241200 Phaseolus vulgaris HOM05D000010 ORTHO05D000063 4.7e-18 96.3 272 29.8
Psat5g142520 Pisum sativum HOM05D000010 ORTHO05D000063 4.7e-18 96.3 281 29.5
Nitab4.5_0002297g0020 Nicotiana tabacum HOM05D000010 ORTHO05D000063 8.0e-18 95.5 279 29.4
CANSAT78G2463 Cannabis sativa HOM05D000010 ORTHO05D000063 1.4e-17 94.7 292 30.1
PSO063G0909 Papaver somniferum HOM05D000010 ORTHO05D000063 1.4e-17 94.7 320 28.1
MBI06_g20927_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000063 2.3e-17 94.0 305 31.8
Atru.chr1.2134 Acer truncatum HOM05D000010 ORTHO05D000063 3.1e-17 93.6 278 28.4
Gohir.A11G170000 Gossypium hirsutum HOM05D000010 ORTHO05D000063 4.0e-17 93.2 296 27.4
MELO3C025099.2 Cucumis melo HOM05D000010 ORTHO05D000063 5.2e-17 92.8 291 32.6
Peaxi162Scf00294g00625 Petunia axillaris HOM05D000010 ORTHO05D000063 6.8e-17 92.4 287 31.0
Lsat_1_v5_gn_2_71740 Lactuca sativa HOM05D000010 ORTHO05D000063 8.9e-17 92.0 268 30.2
Sed0007727 Sechium edule HOM05D000010 ORTHO05D000063 8.9e-17 92.0 283 31.4
HanXRQChr16g0532331 Helianthus annuus HOM05D000010 ORTHO05D000063 7.5e-16 89.0 372 25.5
CiPaw.04G049700 Carya illinoinensis HOM05D000010 ORTHO05D000063 1.3e-15 88.2 280 30.0
PSO832G4375 Papaver somniferum HOM05D000010 ORTHO05D000063 1.3e-15 88.2 278 31.7
Peaxi162Scf00713g00018 Petunia axillaris HOM05D000010 ORTHO05D000063 1.7e-15 87.8 348 25.3
PSO782G2931 Papaver somniferum HOM05D000010 ORTHO05D000063 2.9e-15 87.0 278 31.3
Migut.K00745 Erythranthe guttata HOM05D000010 ORTHO05D000063 3.7e-15 86.7 378 28.8
DCAR_003409 Daucus carota HOM05D000010 ORTHO05D000063 8.3e-15 85.5 249 30.1
Aqoxy3G04156 Aquilegia oxysepala HOM05D000010 ORTHO05D000063 1.1e-14 85.1 307 28.3
Lsat_1_v5_gn_3_67400 Lactuca sativa HOM05D000010 ORTHO05D000063 1.1e-14 85.1 258 30.6
TPR.G5302 Trifolium pratense HOM05D000010 ORTHO05D000063 1.4e-14 84.7 247 32.4
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 1.6e-13 81.3 268 27.6
Solyc02g081270.4 Solanum lycopersicum HOM05D000010 ORTHO05D000063 4.6e-13 79.7 227 32.6
Peaxi162Scf00521g00049 Petunia axillaris HOM05D000010 ORTHO05D000063 7.8e-13 79.0 265 27.9
HanXRQChr12g0365731 Helianthus annuus HOM05D000010 ORTHO05D000063 1.7e-12 77.8 367 23.7
MSTRG.15637 Avicennia marina HOM05D000010 ORTHO05D000063 8.6e-12 75.5 364 24.5
Lalb_Chr15g0085221 Lupinus albus HOM05D000010 ORTHO05D000063 7.3e-11 72.4 296 27.7
Ca_17070_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000063 1.4e-09 68.2 205 29.3
vmacro20466 Vaccinium macrocarpon HOM05D000010 ORTHO05D000063 3.1e-09 67.0 261 28.7
Cpa.g.sc178.32 Carica papaya HOM05D000010 ORTHO05D000063 6.8e-09 65.9 149 28.9
Os03g0119966 Oryza sativa ssp. japonica HOM05D000010 ORTHO05D000063 1.2e-08 65.1 348 25.6
MBI08_g16125_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000063 2.6e-08 63.9 188 29.3
SGA_v2.0_scaffold115G32049 Striga asiatica HOM05D000010 ORTHO05D000063 2.6e-08 63.9 252 27.8
TPR.G26680 Trifolium pratense HOM05D000010 ORTHO05D000063 5.8e-08 62.8 235 26.8
Lalb_Chr18g0053691 Lupinus albus HOM05D000010 ORTHO05D000063 7.5e-08 62.4 362 24.9
PGR004G2042 Punica granatum HOM05D000010 ORTHO05D000063 7.5e-08 62.4 268 29.1
MBI06_g34025_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000063 1.7e-07 61.2 194 27.8
Nitab4.5_0000091g0390 Nicotiana tabacum HOM05D000010 ORTHO05D000063 2.2e-07 60.8 237 28.7
THA.LOC104802913 Tarenaya hassleriana HOM05D000010 ORTHO05D000063 2.9e-07 60.5 220 25.9
Dinv28244 Davidia involucrata HOM05D000010 ORTHO05D000063 4.9e-07 59.7 89 42.7
TWI77G0949 Tripterygium wilfordii HOM05D000010 ORTHO05D000063 6.4e-07 59.3 204 31.9
VMungo0540G0207 Vigna mungo HOM05D000010 ORTHO05D000063 6.4e-07 59.3 194 28.9
AT1G65910 Arabidopsis thaliana HOM05D000010 ORTHO05D000063 8.3e-07 58.9 256 27.0
Thhalv10018275m.g Eutrema salsugineum HOM05D000010 ORTHO05D000063 8.3e-07 58.9 243 26.7
MBI08_g28718_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000063 1.4e-06 58.2 139 30.9
THA.LOC104820864 Tarenaya hassleriana HOM05D000010 ORTHO05D000063 1.9e-06 57.8 222 25.2
AL2G23290 Arabidopsis lyrata HOM05D000010 ORTHO05D000063 2.4e-06 57.4 261 27.6
Lalb_Chr20g0117071 Lupinus albus HOM05D000010 ORTHO05D000063 7.1e-06 55.8 214 26.2


User provided reference genes

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