Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 3.8e-123 444.9 229 100.0
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 1.1e-66 257.3 186 73.7
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 2.1e-57 226.5 227 57.3
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 5.2e-56 221.9 182 65.4
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 6.8e-56 221.5 231 54.1
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 2.0e-55 219.9 166 67.5
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 4.4e-55 218.8 212 58.5
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 2.2e-54 216.5 173 64.2
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 4.8e-54 215.3 161 68.3
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.8e-53 213.4 192 62.0
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 3.1e-53 212.6 162 69.1
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 3.1e-53 212.6 178 61.8
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 4.1e-53 212.2 173 63.0
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 5.4e-53 211.8 230 56.1
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 9.1e-53 211.1 170 67.6
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.6e-52 210.3 172 62.8
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 1.6e-52 210.3 166 63.9
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 2.0e-52 209.9 142 73.2
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.0e-52 209.9 173 62.4
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 2.7e-52 209.5 170 65.9
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.0e-51 207.6 144 72.9
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.8e-51 205.7 144 72.2
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 6.6e-51 204.9 180 60.0
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 8.6e-51 204.5 143 71.3
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.1e-50 204.1 167 62.3
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.1e-50 204.1 144 71.5
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 1.5e-50 203.8 154 68.2
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 1.9e-50 203.4 198 59.1
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 1.9e-50 203.4 140 70.7
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 1.9e-50 203.4 143 71.3
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 2.5e-50 203.0 167 63.5
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 2.5e-50 203.0 175 63.4
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 2.5e-50 203.0 143 71.3
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 3.3e-50 202.6 183 57.9
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 4.2e-50 202.2 173 59.0
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 1.2e-49 200.7 167 62.9
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 2.8e-49 199.5 161 65.2
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 2.8e-49 199.5 231 50.6
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 4.7e-49 198.7 169 62.1
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 6.1e-49 198.4 212 54.2
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 1.0e-48 197.6 158 67.1
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 2.3e-48 196.4 211 53.1
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 3.0e-48 196.1 160 61.9
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 6.8e-48 194.9 156 64.1
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 8.9e-48 194.5 210 52.9
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 8.9e-48 194.5 229 50.2
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 1.2e-47 194.1 192 54.7
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 2.0e-47 193.4 144 70.1
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 3.4e-47 192.6 170 61.8
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 3.4e-47 192.6 144 69.4
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 4.4e-47 192.2 161 63.4
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 4.4e-47 192.2 153 68.6
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 5.7e-47 191.8 190 55.8
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 7.5e-47 191.4 155 67.7
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 2.8e-46 189.5 153 64.7
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 2.8e-46 189.5 147 65.3
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 3.7e-46 189.1 137 67.2
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 4.9e-46 188.7 154 63.6
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 4.9e-46 188.7 147 65.3
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 4.9e-46 188.7 170 58.2
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 1.1e-45 187.6 181 60.2
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.1e-45 187.6 133 67.7
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 1.4e-45 187.2 172 57.6
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 4.1e-45 185.7 121 75.2
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 9.2e-45 184.5 177 55.9
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 4.5e-44 182.2 126 70.6
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 3.9e-43 179.1 120 72.5
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 5.0e-43 178.7 156 59.0
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 6.6e-43 178.3 118 71.2
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 6.6e-43 178.3 141 63.1
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.1e-42 177.6 159 61.0
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 9.5e-42 174.5 175 56.0
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 4.7e-41 172.2 190 54.2
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 8.0e-41 171.4 180 55.6
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.0e-40 171.0 156 59.0
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 8.9e-40 167.9 151 59.6
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 4.4e-39 165.6 163 54.0
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 3.2e-37 159.5 189 49.2
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 4.1e-37 159.1 127 63.8
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 1.7e-35 153.7 143 58.7
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 4.3e-34 149.1 121 63.6
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 1.6e-33 147.1 124 66.1
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 2.1e-33 146.7 144 61.8
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 6.2e-33 145.2 89 78.7
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 6.2e-33 145.2 99 69.7
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 6.2e-33 145.2 92 78.3
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 4.0e-32 142.5 173 49.1
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 4.4e-31 139.0 122 55.7
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.4e-29 133.3 83 78.3
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 5.4e-29 132.1 101 69.3
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 1.6e-28 130.6 121 56.2
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 4.6e-28 129.0 94 69.1
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 4.3e-26 122.5 144 50.7
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 4.7e-25 119.0 71 80.3
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.1e-24 117.9 83 73.5
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 3.1e-24 116.3 103 58.3
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 3.2e-21 106.3 173 39.9
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 7.8e-20 101.7 80 63.8
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 5.1e-19 99.0 92 57.6
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 1.4e-16 90.9 70 65.7
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 3.4e-15 86.3 116 44.0
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 7.6e-15 85.1 53 77.4
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 1.9e-13 80.5 124 41.9
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 4.2e-13 79.3 64 62.5
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 8.7e-11 71.6 158 36.1
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 6.2e-09 65.5 91 46.2
AUR62041648 Chenopodium quinoa HOM05D007159 ORTHO05D009068 3.1e-08 63.2 115 40.9
Migut.F00112 Erythranthe guttata HOM05D009116 ORTHO05D011299 1.2e-07 61.2 127 30.7
Os04g0600100 Oryza sativa ssp. japonica HOM05D009116 ORTHO05D011299 2.0e-07 60.5 120 31.7
unitig_52.g17699 Utricularia gibba HOM05D009116 ORTHO05D011299 2.0e-07 60.5 120 33.3
Eucgr.H00677 Eucalyptus grandis HOM05D009116 ORTHO05D011299 2.6e-07 60.1 125 31.2
MSTRG.26944 Avicennia marina HOM05D009116 ORTHO05D011299 3.4e-07 59.7 179 26.8
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 5.8e-07 58.9 125 32.0
Rhsim03G0219300 Rhododendron simsii HOM05D009116 ORTHO05D011299 9.9e-07 58.2 150 30.0
Nitab4.5_0003012g0090 Nicotiana tabacum HOM05D009116 ORTHO05D011299 1.3e-06 57.8 127 33.9
Ciclev10012634m.g Citrus clementina HOM05D009116 ORTHO05D011299 1.7e-06 57.4 125 31.2
Hund27206 Selenicereus undatus HOM05D009116 ORTHO05D011299 2.9e-06 56.6 191 25.7
EL10Ac1g00288 Beta vulgaris HOM05D009116 ORTHO05D011299 3.8e-06 56.2 163 28.8
CDE02G3635 Ceratophyllum demersum HOM05D009116 ORTHO05D011299 6.4e-06 55.5 119 32.8
Oeu038114.2 Olea europaea HOM05D002675 ORTHO05D003322 6.4e-06 55.5 166 26.5


User provided reference genes

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