Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06790 Selenicereus undatus HOM05D007506 ORTHO05D008409 4.1e-99 364.8 192 100.0
Nitab4.5_0002586g0040 Nicotiana tabacum HOM05D007506 ORTHO05D008409 3.5e-13 79.3 74 67.6
Glyma.10G277900 Glycine max HOM05D007506 ORTHO05D008409 8.6e-12 74.7 82 61.0
EL10Ac4g08692 Beta vulgaris HOM05D007506 ORTHO05D008409 2.5e-11 73.2 70 70.0
CAN.G1373.1 Capsicum annuum HOM05D007506 ORTHO05D008409 3.3e-11 72.8 59 71.2
Migut.F00865 Erythranthe guttata HOM05D007506 ORTHO05D008409 3.3e-11 72.8 66 71.2
AUR62042085 Chenopodium quinoa HOM05D007506 ORTHO05D008409 4.3e-11 72.4 68 72.1
Solyc11g006750.1 Solanum lycopersicum HOM05D007506 ORTHO05D008409 1.6e-10 70.5 59 72.9
Dinv12843 Davidia involucrata HOM05D007506 ORTHO05D008409 3.6e-10 69.3 66 68.2
SalBow3G3829 Salvia bowleyana HOM05D007506 ORTHO05D008409 1.0e-09 67.8 50 78.0
VMungo0720G0153 Vigna mungo HOM05D007506 ORTHO05D008409 1.4e-09 67.4 81 56.8
Oeu024806.1 Olea europaea HOM05D007506 ORTHO05D008409 2.3e-09 66.6 64 68.8
Nitab4.5_0010633g0010 Nicotiana tabacum HOM05D007506 ORTHO05D008409 4.0e-09 65.9 62 66.1
Peaxi162Scf00519g00621 Petunia axillaris HOM05D007506 ORTHO05D008409 4.0e-09 65.9 60 70.0
RcHm_v2.0_Chr1g0331731 Rosa chinensis HOM05D007506 ORTHO05D008409 4.0e-09 65.9 85 52.9
Sopen11g002680 Solanum pennellii HOM05D007506 ORTHO05D008409 4.0e-09 65.9 60 71.7
PGSC0003DMG400023979 Solanum tuberosum HOM05D007506 ORTHO05D008409 4.0e-09 65.9 59 69.5
Cc02_g09560 Coffea canephora HOM05D007506 ORTHO05D008409 5.2e-09 65.5 64 65.6
Peaxi162Scf00125g00216 Petunia axillaris HOM05D007506 ORTHO05D008409 5.2e-09 65.5 60 66.7
Nitab4.5_0005214g0030 Nicotiana tabacum HOM05D007506 ORTHO05D008409 1.2e-08 64.3 62 66.1
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 2.0e-08 63.5 66 65.2
THA.LOC104816468 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 2.6e-08 63.2 87 54.0
TPR.G2499 Trifolium pratense HOM05D007506 ORTHO05D008409 3.4e-08 62.8 76 55.3
Sc20g0001140 Simmondsia chinensis HOM05D007506 ORTHO05D008409 4.4e-08 62.4 66 63.6
TAR633G2594 Trochodendron aralioides HOM05D007506 ORTHO05D008409 4.4e-08 62.4 67 55.2
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 7.5e-08 61.6 58 65.5
Hma1.2p1_0756F.1_g213210 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 7.5e-08 61.6 59 61.0
Hma1.2p1_0756F.1_g213215 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 7.5e-08 61.6 59 61.0
Hma1.2p1_1491F.1_g286710 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 7.5e-08 61.6 59 61.0
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 9.8e-08 61.2 81 56.8
THA.LOC109117254 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 1.3e-07 60.8 87 54.0
Phvul.007G023500 Phaseolus vulgaris HOM05D007506 ORTHO05D008409 1.7e-07 60.5 82 53.7
Duzib106G0675 Durio zibethinus HOM05D007506 ORTHO05D008409 2.2e-07 60.1 66 63.6
FvH4_7g05151 Fragaria vesca HOM05D007506 ORTHO05D008409 2.2e-07 60.1 57 63.2
FAN05G5073 Fragaria x ananassa HOM05D007506 ORTHO05D008409 2.2e-07 60.1 53 66.0
FAN08G2571 Fragaria x ananassa HOM05D007506 ORTHO05D008409 2.2e-07 60.1 53 66.0
FAN28G2052 Fragaria x ananassa HOM05D007506 ORTHO05D008409 2.2e-07 60.1 53 66.0
Zm00001eb252110 Zea mays HOM05D000188 ORTHO05D003976 2.2e-07 60.1 102 45.1
PSO801G0534 Papaver somniferum HOM05D007506 ORTHO05D008409 2.9e-07 59.7 82 51.2
Lalb_Chr06g0166331 Lupinus albus HOM05D007506 ORTHO05D008409 3.7e-07 59.3 81 53.1
Dinv02210 Davidia involucrata HOM05D007506 ORTHO05D008409 4.9e-07 58.9 57 64.9
SGA_v2.0_scaffold62G21316 Striga asiatica HOM05D007506 ORTHO05D008409 4.9e-07 58.9 56 67.9
AUR62034189 Chenopodium quinoa HOM05D007506 ORTHO05D008409 6.4e-07 58.5 58 70.7
Medtr1g111840 Medicago truncatula HOM05D007506 ORTHO05D008409 6.4e-07 58.5 86 52.3
PSO339G4482 Papaver somniferum HOM05D007506 ORTHO05D008409 6.4e-07 58.5 82 50.0
unitig_899.g14468 Utricularia gibba HOM05D007506 ORTHO05D008409 6.4e-07 58.5 38 86.8
GSVIVG01010679001 Vitis vinifera HOM05D007506 ORTHO05D008409 6.4e-07 58.5 39 82.1
Zm00001eb242800 Zea mays HOM05D007506 ORTHO05D008409 6.4e-07 58.5 56 60.7
Nitab4.5_0015562g0010 Nicotiana tabacum HOM05D007506 ORTHO05D008409 8.3e-07 58.2 54 66.7
CDE07G1652 Ceratophyllum demersum HOM05D057737 ORTHO05D008409 1.4e-06 57.4 64 56.2
FAN03G1835 Fragaria x ananassa HOM05D007506 ORTHO05D008409 1.4e-06 57.4 57 61.4
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 1.4e-06 57.4 64 64.1
Nn6g34869 Nelumbo nucifera HOM05D007506 ORTHO05D008409 1.4e-06 57.4 58 58.6
Sabra10G0188200 Salix brachista HOM05D007506 ORTHO05D008409 1.4e-06 57.4 103 48.5
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 1.9e-06 57.0 63 61.9
CAN.G1417.6 Capsicum annuum HOM05D007506 ORTHO05D008409 1.9e-06 57.0 67 58.2
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 2.4e-06 56.6 64 60.9
CiPaw.14G033800 Carya illinoinensis HOM05D007506 ORTHO05D008409 3.2e-06 56.2 66 56.1
Lj5g0016646 Lotus japonicus HOM05D007506 ORTHO05D008409 3.2e-06 56.2 85 48.2
Aqoxy7G00782 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 5.4e-06 55.5 67 55.2
Oeu027974.1 Olea europaea HOM05D007506 ORTHO05D008409 5.4e-06 55.5 60 65.0
Psat6g238400 Pisum sativum HOM05D007506 ORTHO05D008409 5.4e-06 55.5 61 59.0
Ca_25653_v3 Cicer arietinum L. HOM05D007506 ORTHO05D008409 7.0e-06 55.1 85 47.1
Haze_03301 Corylus avellana HOM05D007506 ORTHO05D008409 7.0e-06 55.1 70 55.7
Aqoxy7G00781 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 9.2e-06 54.7 68 58.8
AT5G04750 Arabidopsis thaliana HOM05D012863 ORTHO05D008409 9.2e-06 54.7 66 62.1
Thecc.10G114000 Theobroma cacao HOM05D007506 ORTHO05D008409 9.2e-06 54.7 64 59.4


User provided reference genes

Program Settings