Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06759 Selenicereus undatus HOM05D002746 ORTHO05D003037 2.6e-150 535.4 281 100.0
Dinv36375 Davidia involucrata HOM05D002746 ORTHO05D003037 4.3e-28 129.4 288 36.5
PGR142G3471 Punica granatum HOM05D002746 ORTHO05D003037 9.9e-25 118.2 319 33.5
TAR636G2586 Trochodendron aralioides HOM05D002746 ORTHO05D003037 1.3e-19 101.3 312 32.4
Actinidia34797 Actinidia chinensis HOM05D001960 ORTHO05D004348 2.8e-19 100.1 303 30.4
Sc20g0001570 Simmondsia chinensis HOM05D002746 ORTHO05D003037 3.6e-19 99.8 229 37.1
GSVIVG01031478001 Vitis vinifera HOM05D002746 ORTHO05D003037 1.1e-18 98.2 293 34.1
Nn2g13843 Nelumbo nucifera HOM05D002746 ORTHO05D003037 2.4e-18 97.1 324 32.1
Potri.004G216000 Populus trichocarpa HOM05D002746 ORTHO05D003037 1.5e-17 94.4 300 32.0
TAR369G0776 Trochodendron aralioides HOM05D002746 ORTHO05D003037 2.0e-17 94.0 289 31.5
CAN.G694.42 Capsicum annuum HOM05D002746 ORTHO05D003037 3.4e-17 93.2 309 28.2
Hma1.2p1_0117F.1_g056370 Hydrangea macrophylla HOM05D002746 ORTHO05D003037 7.6e-17 92.0 296 30.4
Duzib170G0446 Durio zibethinus HOM05D002746 ORTHO05D003037 1.7e-16 90.9 302 31.1
MSTRG.9139 Avicennia marina HOM05D002746 ORTHO05D003037 3.8e-16 89.7 322 30.4
GSVIVG01016210001 Vitis vinifera HOM05D002746 ORTHO05D003037 6.4e-16 89.0 311 30.9
MD03G1126800 Malus domestica HOM05D002746 ORTHO05D003037 8.4e-16 88.6 298 32.2
MD11G1147400 Malus domestica HOM05D002746 ORTHO05D003037 1.4e-15 87.8 303 31.4
MSTRG.8123 Avicennia marina HOM05D002746 ORTHO05D003037 1.9e-15 87.4 287 30.7
Duzib168G1483 Durio zibethinus HOM05D002746 ORTHO05D003037 1.9e-15 87.4 304 29.9
Potri.009G006100 Populus trichocarpa HOM05D002746 ORTHO05D003037 1.9e-15 87.4 239 31.0
HanXRQChr13g0404481 Helianthus annuus HOM05D002746 ORTHO05D003037 3.2e-15 86.7 314 27.1
Prupe.6G111900 Prunus persica HOM05D002746 ORTHO05D003037 3.2e-15 86.7 291 33.3
Thecc.09G350400 Theobroma cacao HOM05D002746 ORTHO05D003037 4.2e-15 86.3 307 30.3
Eucgr.B03933 Eucalyptus grandis HOM05D002746 ORTHO05D003037 5.4e-15 85.9 311 29.3
DCAR_019068 Daucus carota HOM05D002746 ORTHO05D003037 7.1e-15 85.5 285 28.4
Peaxi162Scf00176g01630 Petunia axillaris HOM05D002746 ORTHO05D003037 7.1e-15 85.5 183 36.6
CSS0033737 Camellia sinensis var. sinensis HOM05D002746 ORTHO05D003037 9.3e-15 85.1 356 28.4
Ciclev10028947m.g Citrus clementina HOM05D002746 ORTHO05D003037 9.3e-15 85.1 292 29.8
Cfa010292 Carpinus fangiana HOM05D002746 ORTHO05D003037 1.6e-14 84.3 297 31.6
QL01p015272 Quercus lobata HOM05D002746 ORTHO05D003037 2.7e-14 83.6 243 34.6
TWI79G0510 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 2.7e-14 83.6 293 30.0
Gohir.D05G293300 Gossypium hirsutum HOM05D002746 ORTHO05D003037 3.5e-14 83.2 285 32.3
PGR119G0855 Punica granatum HOM05D002746 ORTHO05D003037 3.5e-14 83.2 305 31.1
Actinidia18545 Actinidia chinensis HOM05D002746 ORTHO05D003037 6.0e-14 82.4 395 25.1
CANSAT56G3275 Cannabis sativa HOM05D002746 ORTHO05D003037 7.9e-14 82.0 329 28.0
Hund01439 Selenicereus undatus HOM05D002746 ORTHO05D003037 7.9e-14 82.0 300 30.3
Oeu046646.1 Olea europaea HOM05D002746 ORTHO05D003037 1.0e-13 81.6 282 27.7
TWI79G0630 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 1.0e-13 81.6 293 30.4
COL.COLO4_11106 Corchorus olitorius HOM05D002746 ORTHO05D003037 1.3e-13 81.3 277 31.4
ECA232G1997 Erigeron canadensis HOM05D002746 ORTHO05D003037 1.8e-13 80.9 328 29.0
Migut.F01943 Erythranthe guttata HOM05D002746 ORTHO05D003037 2.3e-13 80.5 289 29.1
Solyc11g008090.2 Solanum lycopersicum HOM05D002746 ORTHO05D003037 2.3e-13 80.5 284 26.4
Atru.chr3.3527 Acer truncatum HOM05D002746 ORTHO05D003037 5.1e-13 79.3 315 31.7
Gorai.009G309800 Gossypium raimondii HOM05D002746 ORTHO05D003037 8.7e-13 78.6 290 31.0
Nn6g35239 Nelumbo nucifera HOM05D002746 ORTHO05D003037 8.7e-13 78.6 327 30.0
Sopen11g003940 Solanum pennellii HOM05D002746 ORTHO05D003037 8.7e-13 78.6 280 26.4
Cc02_g10720 Coffea canephora HOM05D002746 ORTHO05D003037 1.1e-12 78.2 364 26.6
Rhsim09G0146600 Rhododendron simsii HOM05D002746 ORTHO05D003037 1.1e-12 78.2 389 27.5
Actinidia06732 Actinidia chinensis HOM05D002746 ORTHO05D003037 4.3e-12 76.3 395 24.6
CiPaw.01G266600 Carya illinoinensis HOM05D002746 ORTHO05D003037 5.6e-12 75.9 339 28.6
QL08p053342 Quercus lobata HOM05D002746 ORTHO05D003037 1.6e-11 74.3 385 27.5
Haze_16759 Corylus avellana HOM05D002746 ORTHO05D003037 2.8e-11 73.6 243 30.0
Ah.01g003290 Amaranthus hybridus HOM05D002746 ORTHO05D003037 3.7e-11 73.2 339 29.2
CSS0002034 Camellia sinensis var. sinensis HOM05D002746 ORTHO05D003037 8.1e-11 72.0 403 25.3
AUR62029178 Chenopodium quinoa HOM05D002746 ORTHO05D003037 8.1e-11 72.0 310 28.7
vmacro10253 Vaccinium macrocarpon HOM05D002746 ORTHO05D003037 8.1e-11 72.0 397 25.4
vmacro14395 Vaccinium macrocarpon HOM05D002746 ORTHO05D003037 8.1e-11 72.0 237 32.9
AUR62014958 Chenopodium quinoa HOM05D002746 ORTHO05D003037 1.4e-10 71.2 273 29.7
Hma1.2p1_0779F.1_g216690 Hydrangea macrophylla HOM05D002746 ORTHO05D003037 1.4e-10 71.2 269 29.4
Migut.F01699 Erythranthe guttata HOM05D002746 ORTHO05D003037 2.4e-10 70.5 415 23.6
Manes.04G013601 Manihot esculenta HOM05D002746 ORTHO05D003037 2.4e-10 70.5 303 31.4
Peaxi162Scf00982g00011 Petunia axillaris HOM05D002746 ORTHO05D003037 2.4e-10 70.5 283 29.3
CAN.G459.30 Capsicum annuum HOM05D002746 ORTHO05D003037 4.0e-10 69.7 306 28.4
Rhsim11G0027700 Rhododendron simsii HOM05D002746 ORTHO05D003037 4.0e-10 69.7 233 31.8
MSTRG.12339 Avicennia marina HOM05D002746 ORTHO05D003037 5.3e-10 69.3 208 33.2
Atru.chr12.881 Acer truncatum HOM05D002746 ORTHO05D003037 6.9e-10 68.9 367 27.5
Actinidia03695 Actinidia chinensis HOM05D002746 ORTHO05D003037 6.9e-10 68.9 286 28.7
Lj2A1009T38 Lonicera japonica HOM05D002746 ORTHO05D003037 6.9e-10 68.9 299 27.1
MBI13_g39327_MAGBIO Magnolia biondii HOM05D002746 ORTHO05D003037 6.9e-10 68.9 257 29.6
TWI63G0026 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 6.9e-10 68.9 296 28.7
ClCG08G007860 Citrullus lanatus HOM05D002746 ORTHO05D003037 9.0e-10 68.6 424 25.5
Duzib150G0085 Durio zibethinus HOM05D002746 ORTHO05D003037 9.0e-10 68.6 170 36.5
Gohir.A05G292300 Gossypium hirsutum HOM05D002746 ORTHO05D003037 9.0e-10 68.6 203 32.0
TAR633G0282 Trochodendron aralioides HOM05D002746 ORTHO05D003037 9.0e-10 68.6 232 31.0
HPP92_008395 Vanilla planifolia HOM05D002746 ORTHO05D003037 9.0e-10 68.6 326 27.6
MSTRG.17763 Avicennia marina HOM05D002746 ORTHO05D003037 1.2e-09 68.2 244 29.1
Solyc11g066350.2 Solanum lycopersicum HOM05D002746 ORTHO05D003037 1.5e-09 67.8 235 29.4
Sopen11g026100 Solanum pennellii HOM05D002746 ORTHO05D003037 1.5e-09 67.8 235 29.4
PGSC0003DMG400000414 Solanum tuberosum HOM05D002746 ORTHO05D003037 1.5e-09 67.8 235 29.4
CAN.G546.40 Capsicum annuum HOM05D002746 ORTHO05D003037 2.0e-09 67.4 303 28.4
CDE04G0545 Ceratophyllum demersum HOM05D002746 ORTHO05D003037 2.6e-09 67.0 306 28.4
THA.LOC104810879 Tarenaya hassleriana HOM05D002746 ORTHO05D003037 2.6e-09 67.0 277 27.8
Medtr4g057530 Medicago truncatula HOM05D002746 ORTHO05D003037 4.5e-09 66.2 302 28.1
CiPaw.02G170900 Carya illinoinensis HOM05D002746 ORTHO05D003037 5.8e-09 65.9 285 27.0
TWI75G0416 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 7.6e-09 65.5 297 27.6
SalBow4G2846 Salvia bowleyana HOM05D002746 ORTHO05D003037 9.9e-09 65.1 314 28.0
Dinv31245 Davidia involucrata HOM05D002746 ORTHO05D003037 1.3e-08 64.7 159 35.2
Nitab4.5_0000096g0260 Nicotiana tabacum HOM05D002746 ORTHO05D003037 1.3e-08 64.7 329 24.6
Sabra10G0177700 Salix brachista HOM05D002746 ORTHO05D003037 2.2e-08 63.9 405 23.0
Ca_02470_v3 Cicer arietinum L. HOM05D002746 ORTHO05D003037 3.8e-08 63.2 215 29.8
Ca_30123_v3 Cicer arietinum L. HOM05D002746 ORTHO05D003037 3.8e-08 63.2 215 29.8
Sabra09G0003400 Salix brachista HOM05D002746 ORTHO05D003037 3.8e-08 63.2 227 27.3
Nitab4.5_0000329g0090 Nicotiana tabacum HOM05D002746 ORTHO05D003037 4.9e-08 62.8 235 26.4
Sed0007948 Sechium edule HOM05D002746 ORTHO05D003037 4.9e-08 62.8 287 27.2
MELO3C019841.2 Cucumis melo HOM05D002746 ORTHO05D003037 8.4e-08 62.0 264 26.1
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.1e-07 61.6 293 30.0
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.1e-07 61.6 293 30.0
CsaV3_2G021060 Cucumis sativus L. HOM05D002746 ORTHO05D003037 1.1e-07 61.6 269 25.7
ECA233G0311 Erigeron canadensis HOM05D002746 ORTHO05D003037 1.4e-07 61.2 304 26.6
Manes.11G151800 Manihot esculenta HOM05D002746 ORTHO05D003037 1.4e-07 61.2 297 29.6
Nitab4.5_0002692g0020 Nicotiana tabacum HOM05D002746 ORTHO05D003037 1.4e-07 61.2 394 23.4
Aqoxy1G01110 Aquilegia oxysepala HOM05D002746 ORTHO05D003037 1.9e-07 60.8 392 24.5
BcaB04g21205 Brassica carinata HOM05D002746 ORTHO05D003037 2.4e-07 60.5 322 26.1
COL.COLO4_09863 Corchorus olitorius HOM05D002746 ORTHO05D003037 2.4e-07 60.5 208 30.8
Migut.N02561 Erythranthe guttata HOM05D002746 ORTHO05D003037 2.4e-07 60.5 196 31.6
Lj3g0017780 Lotus japonicus HOM05D002746 ORTHO05D003037 2.4e-07 60.5 291 27.8
Prupe.2G206000 Prunus persica HOM05D002746 ORTHO05D003037 2.4e-07 60.5 234 28.6
Cc01_g10360 Coffea canephora HOM05D002746 ORTHO05D003037 4.2e-07 59.7 309 30.7
HPP92_004963 Vanilla planifolia HOM05D002746 ORTHO05D003037 4.2e-07 59.7 340 28.5
Lsat_1_v5_gn_9_71621 Lactuca sativa HOM05D002746 ORTHO05D003037 5.5e-07 59.3 294 26.5
CiPaw.13G123400 Carya illinoinensis HOM05D002746 ORTHO05D003037 7.1e-07 58.9 307 31.3
Oeu007312.2 Olea europaea HOM05D002746 ORTHO05D003037 7.1e-07 58.9 296 26.7
Dinv29373 Davidia involucrata HOM05D002746 ORTHO05D003037 1.2e-06 58.2 294 26.2
Nitab4.5_0002285g0050 Nicotiana tabacum HOM05D002746 ORTHO05D003037 1.2e-06 58.2 314 28.0
Gohir.A05G107100 Gossypium hirsutum HOM05D002746 ORTHO05D003037 1.6e-06 57.8 297 26.3
Lsat_1_v5_gn_6_44580 Lactuca sativa HOM05D002746 ORTHO05D003037 1.6e-06 57.8 305 25.9
Nitab4.5_0003880g0010 Nicotiana tabacum HOM05D002746 ORTHO05D003037 2.1e-06 57.4 279 27.2
Potri.010G229100 Populus trichocarpa HOM05D002746 ORTHO05D003037 2.1e-06 57.4 194 27.8
TWI38G1635 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 2.1e-06 57.4 322 28.0
Thecc.10G087200 Theobroma cacao HOM05D002746 ORTHO05D003037 2.7e-06 57.0 382 24.6
EL10Ac9g22611 Beta vulgaris HOM05D002746 ORTHO05D003037 3.5e-06 56.6 272 26.5
MELO3C004971.2 Cucumis melo HOM05D002746 ORTHO05D003037 3.5e-06 56.6 290 27.9
Gorai.009G111300 Gossypium raimondii HOM05D002746 ORTHO05D003037 3.5e-06 56.6 296 25.3
TPR.G36829 Trifolium pratense HOM05D002746 ORTHO05D003037 3.5e-06 56.6 241 28.6
Lalb_Chr06g0169891 Lupinus albus HOM05D002746 ORTHO05D003037 4.6e-06 56.2 143 32.2
CsaV3_1G013340 Cucumis sativus L. HOM05D002746 ORTHO05D003037 6.0e-06 55.8 290 27.6


User provided reference genes

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