Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06709 Selenicereus undatus HOM05D006153 ORTHO05D007701 3.5e-82 308.1 146 100.0
AUR62031329 Chenopodium quinoa HOM05D006153 ORTHO05D007701 4.3e-32 141.7 152 49.3
AUR62027357 Chenopodium quinoa HOM05D006153 ORTHO05D007701 5.5e-27 124.8 138 49.3
EL10Ac8g19360 Beta vulgaris HOM05D006153 ORTHO05D007701 7.2e-27 124.4 151 47.0
Potri.001G296900 Populus trichocarpa HOM05D006153 ORTHO05D007701 3.2e-19 99.0 91 56.0
Manes.07G064400 Manihot esculenta HOM05D006153 ORTHO05D007701 8.0e-18 94.4 57 70.2
Sc14g0002580 Simmondsia chinensis HOM05D006153 ORTHO05D007701 1.0e-17 94.0 88 53.4
CANSAT25G0942 Cannabis sativa HOM05D006153 ORTHO05D007701 8.8e-17 90.9 85 48.2
CiPaw.05G015200 Carya illinoinensis HOM05D006153 ORTHO05D007701 2.0e-16 89.7 55 70.9
Duzib132G0541 Durio zibethinus HOM05D006153 ORTHO05D007701 1.3e-15 87.0 59 62.7
MD05G1096000 Malus domestica HOM05D006153 ORTHO05D007701 1.3e-15 87.0 136 41.2
Potri.009G091100 Populus trichocarpa HOM05D006153 ORTHO05D007701 1.3e-15 87.0 61 63.9
Sabra09G0070400 Salix brachista HOM05D006153 ORTHO05D007701 1.3e-15 87.0 72 58.3
Thecc.02G113400 Theobroma cacao HOM05D006153 ORTHO05D007701 1.7e-15 86.7 56 64.3
Nitab4.5_0001105g0220 Nicotiana tabacum HOM05D006153 ORTHO05D007701 2.8e-15 85.9 58 65.5
Nitab4.5_0004685g0060 Nicotiana tabacum HOM05D006153 ORTHO05D007701 2.8e-15 85.9 58 65.5
TWI23G0900 Tripterygium wilfordii HOM05D006153 ORTHO05D007701 2.8e-15 85.9 53 69.8
Dinv42217 Davidia involucrata HOM05D006153 ORTHO05D007701 3.7e-15 85.5 63 57.1
Duzib052G0610 Durio zibethinus HOM05D006153 ORTHO05D007701 4.8e-15 85.1 58 65.5
GSVIVG01037872001 Vitis vinifera HOM05D006153 ORTHO05D007701 6.3e-15 84.7 51 70.6
Gohir.A01G008400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 8.2e-15 84.3 63 58.7
GSVIVG01037873001 Vitis vinifera HOM05D006153 ORTHO05D007701 1.1e-14 84.0 52 67.3
Gorai.002G009800 Gossypium raimondii HOM05D006153 ORTHO05D007701 1.4e-14 83.6 63 58.7
Sabra16G0186000 Salix brachista HOM05D006153 ORTHO05D007701 1.4e-14 83.6 58 60.3
GSVIVG01037871001 Vitis vinifera HOM05D006153 ORTHO05D007701 1.8e-14 83.2 51 68.6
QL11p031990 Quercus lobata HOM05D006153 ORTHO05D007701 4.1e-14 82.0 56 62.5
Solyc01g107280.3 Solanum lycopersicum HOM05D006153 ORTHO05D007701 4.1e-14 82.0 131 39.7
COL.COLO4_32545 Corchorus olitorius HOM05D006153 ORTHO05D007701 5.3e-14 81.6 49 67.3
Dinv15786 Davidia involucrata HOM05D006153 ORTHO05D007701 5.3e-14 81.6 50 70.0
MD10G1102200 Malus domestica HOM05D006153 ORTHO05D007701 5.3e-14 81.6 107 43.0
Sopen01g049530 Solanum pennellii HOM05D006153 ORTHO05D007701 5.3e-14 81.6 57 68.4
TAR381G0917 Trochodendron aralioides HOM05D006153 ORTHO05D007701 5.3e-14 81.6 90 46.7
Prupe.8G140400 Prunus persica HOM05D006153 ORTHO05D007701 7.0e-14 81.3 108 48.1
QL11p029270 Quercus lobata HOM05D006153 ORTHO05D007701 7.0e-14 81.3 57 63.2
Haze_10299 Corylus avellana HOM05D006153 ORTHO05D007701 9.1e-14 80.9 84 46.4
arahy.Tifrunner.gnm1.ann1.EHR7LK Arachis hypogaea HOM05D006153 ORTHO05D007701 1.2e-13 80.5 46 73.9
Cpa.g.sc200.7 Carica papaya HOM05D006153 ORTHO05D007701 1.2e-13 80.5 50 66.0
Manes.10G074900 Manihot esculenta HOM05D006153 ORTHO05D007701 1.6e-13 80.1 57 59.6
Nn5g30510 Nelumbo nucifera HOM05D006153 ORTHO05D007701 2.6e-13 79.3 62 58.1
CSS0010428 Camellia sinensis var. sinensis HOM05D006153 ORTHO05D007701 3.5e-13 79.0 81 50.6
Nitab4.5_0012681g0010 Nicotiana tabacum HOM05D006153 ORTHO05D007701 3.5e-13 79.0 58 58.6
Peaxi162Scf00016g00267 Petunia axillaris HOM05D006153 ORTHO05D007701 3.5e-13 79.0 57 63.2
PGR042G3678 Punica granatum HOM05D006153 ORTHO05D007701 4.5e-13 78.6 50 62.0
AL3G32960 Arabidopsis lyrata HOM05D006153 ORTHO05D007701 5.9e-13 78.2 51 64.7
CARHR094970 Cardamine hirsuta HOM05D006153 ORTHO05D007701 5.9e-13 78.2 51 64.7
Glyma.20G131700 Glycine max HOM05D006153 ORTHO05D007701 5.9e-13 78.2 44 70.5
AT3G19550 Arabidopsis thaliana HOM05D006153 ORTHO05D007701 7.7e-13 77.8 51 64.7
Lalb_Chr06g0165291 Lupinus albus HOM05D006153 ORTHO05D007701 7.7e-13 77.8 44 72.7
PSO541G5112 Papaver somniferum HOM05D006153 ORTHO05D007701 1.0e-12 77.4 65 55.4
Cfa004694 Carpinus fangiana HOM05D006153 ORTHO05D007701 1.3e-12 77.0 49 63.3
Ciclev10029838m.g Citrus clementina HOM05D006153 ORTHO05D007701 1.3e-12 77.0 134 36.6
Phvul.007G043000 Phaseolus vulgaris HOM05D006153 ORTHO05D007701 1.3e-12 77.0 44 70.5
Actinidia34374 Actinidia chinensis HOM05D006153 ORTHO05D007701 1.7e-12 76.6 54 66.7
Peaxi162Scf00152g00320 Petunia axillaris HOM05D006153 ORTHO05D007701 1.7e-12 76.6 54 61.1
PGSC0003DMG400025850 Solanum tuberosum HOM05D006153 ORTHO05D007701 1.7e-12 76.6 57 64.9
FAN27G0726 Fragaria x ananassa HOM05D006153 ORTHO05D007701 2.2e-12 76.3 92 45.7
Gohir.D13G044400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 2.2e-12 76.3 58 51.7
Gorai.013G049200 Gossypium raimondii HOM05D006153 ORTHO05D007701 2.2e-12 76.3 58 51.7
Lalb_Chr02g0145121 Lupinus albus HOM05D006153 ORTHO05D007701 2.2e-12 76.3 48 62.5
Nitab4.5_0002017g0030 Nicotiana tabacum HOM05D006153 ORTHO05D007701 2.2e-12 76.3 58 56.9
RcHm_v2.0_Chr6g0253971 Rosa chinensis HOM05D006153 ORTHO05D007701 2.9e-12 75.9 92 45.7
FAN20G1027 Fragaria x ananassa HOM05D006153 ORTHO05D007701 3.8e-12 75.5 92 45.7
VMungo0720G0345 Vigna mungo HOM05D006153 ORTHO05D007701 3.8e-12 75.5 44 68.2
FvH4_2g04480 Fragaria vesca HOM05D006153 ORTHO05D007701 5.0e-12 75.1 92 44.6
FAN24G1230 Fragaria x ananassa HOM05D006153 ORTHO05D007701 5.0e-12 75.1 92 44.6
Glyma.10G259200 Glycine max HOM05D006153 ORTHO05D007701 5.0e-12 75.1 44 68.2
Carub.0003s1938 Capsella rubella HOM05D006153 ORTHO05D007701 8.5e-12 74.3 51 60.8
Peaxi162Scf00003g00261 Petunia axillaris HOM05D006153 ORTHO05D007701 8.5e-12 74.3 48 64.6
BcaC05g28465 Brassica carinata HOM05D006153 ORTHO05D007701 1.1e-11 73.9 49 61.2
A05p30090 Brassica napus HOM05D006153 ORTHO05D007701 1.1e-11 73.9 49 61.2
C05p45510 Brassica napus HOM05D006153 ORTHO05D007701 1.1e-11 73.9 49 61.2
BolC5t33274H Brassica oleracea HOM05D006153 ORTHO05D007701 1.1e-11 73.9 49 61.2
BraA05t21849Z Brassica rapa HOM05D006153 ORTHO05D007701 1.1e-11 73.9 49 61.2
Haze_10254 Corylus avellana HOM05D006153 ORTHO05D007701 1.1e-11 73.9 59 57.6
Haze_10289 Corylus avellana HOM05D006153 ORTHO05D007701 1.1e-11 73.9 84 40.5
FAN15G1936 Fragaria x ananassa HOM05D006153 ORTHO05D007701 1.1e-11 73.9 59 62.7
Eucgr.G00438 Eucalyptus grandis HOM05D006153 ORTHO05D007701 1.5e-11 73.6 49 61.2
Os12g0507700 Oryza sativa ssp. japonica HOM05D006153 ORTHO05D007701 1.5e-11 73.6 67 49.3
Sp3g17600 Schrenkiella parvula HOM05D006153 ORTHO05D007701 1.5e-11 73.6 49 65.3
Migut.I00275 Erythranthe guttata HOM05D006153 ORTHO05D007701 2.5e-11 72.8 57 52.6
Actinidia27982 Actinidia chinensis HOM05D006153 ORTHO05D007701 3.2e-11 72.4 52 63.5
BcaB06g26014 Brassica carinata HOM05D006153 ORTHO05D007701 3.2e-11 72.4 49 59.2
BcaB04g20696 Brassica carinata HOM05D006153 ORTHO05D007701 5.5e-11 71.6 49 63.3
BcaB04g20697 Brassica carinata HOM05D006153 ORTHO05D007701 5.5e-11 71.6 77 46.8
A01p35140 Brassica napus HOM05D006153 ORTHO05D007701 5.5e-11 71.6 77 48.1
BraA01t03596Z Brassica rapa HOM05D006153 ORTHO05D007701 5.5e-11 71.6 77 48.1
Thhalv10021914m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 5.5e-11 71.6 76 46.1
Hma1.2p1_1174F.1_g263880 Hydrangea macrophylla HOM05D006153 ORTHO05D007701 5.5e-11 71.6 61 54.1
Sed0025917 Sechium edule HOM05D006153 ORTHO05D007701 7.2e-11 71.2 51 56.9
ClCG02G006680 Citrullus lanatus HOM05D006153 ORTHO05D007701 9.4e-11 70.9 51 56.9
A01p35130 Brassica napus HOM05D006153 ORTHO05D007701 3.6e-10 68.9 48 62.5
BraA01t03595Z Brassica rapa HOM05D006153 ORTHO05D007701 3.6e-10 68.9 48 62.5
Lj1g0020403 Lotus japonicus HOM05D006153 ORTHO05D007701 8.0e-10 67.8 54 55.6
Aa31LG8G6290 Aethionema arabicum HOM05D006153 ORTHO05D007701 1.0e-09 67.4 48 62.5
CsaV3_7G007950 Cucumis sativus L. HOM05D006153 ORTHO05D007701 1.0e-09 67.4 51 52.9
DCAR_001679 Daucus carota HOM05D006153 ORTHO05D007701 1.0e-09 67.4 121 38.0
HanXRQChr16g0514451 Helianthus annuus HOM05D006153 ORTHO05D007701 1.0e-09 67.4 54 53.7
Zm00001eb138020 Zea mays HOM05D006153 ORTHO05D007701 1.4e-09 67.0 58 46.6
Thhalv10021904m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 3.0e-09 65.9 49 59.2
Oeu013772.1 Olea europaea HOM05D006153 ORTHO05D007701 3.0e-09 65.9 98 34.7
BcaC09g48920 Brassica carinata HOM05D006153 ORTHO05D007701 4.0e-09 65.5 49 59.2
C01p44580 Brassica napus HOM05D006153 ORTHO05D007701 4.0e-09 65.5 49 59.2
Lsat_1_v5_gn_5_114460 Lactuca sativa HOM05D006153 ORTHO05D007701 4.0e-09 65.5 73 42.5
Lj5g0020623 Lotus japonicus HOM05D006153 ORTHO05D007701 5.2e-09 65.1 42 64.3
Cfa004655 Carpinus fangiana HOM05D006153 ORTHO05D007701 6.7e-09 64.7 49 57.1
MELO3C018509.2 Cucumis melo HOM05D006153 ORTHO05D007701 6.7e-09 64.7 46 54.3
SGA_v2.0_scaffold624G53237 Striga asiatica HOM05D006153 ORTHO05D007701 8.8e-09 64.3 86 39.5
HanXRQChr16g0514921 Helianthus annuus HOM05D006153 ORTHO05D007701 1.2e-08 63.9 44 56.8
Psat4g228040 Pisum sativum HOM05D006153 ORTHO05D007701 1.2e-08 63.9 59 45.8
Aqoxy6G02752 Aquilegia oxysepala HOM05D006153 ORTHO05D007701 1.5e-08 63.5 62 46.8
BolC1t04422H Brassica oleracea HOM05D006153 ORTHO05D007701 1.5e-08 63.5 49 57.1
DCAR_001674 Daucus carota HOM05D006153 ORTHO05D007701 1.5e-08 63.5 52 55.8
DCAR_003609 Daucus carota HOM05D006153 ORTHO05D007701 2.0e-08 63.2 62 53.2
Lj5g0024415 Lotus japonicus HOM05D006153 ORTHO05D007701 2.0e-08 63.2 41 63.4
Rhsim05G0089900 Rhododendron simsii HOM05D006153 ORTHO05D007701 2.6e-08 62.8 47 53.2
Ca_24350_v3 Cicer arietinum L. HOM05D006153 ORTHO05D007701 4.4e-08 62.0 32 68.8
HanXRQChr16g0514901 Helianthus annuus HOM05D006153 ORTHO05D007701 4.4e-08 62.0 41 58.5
MBI16_g15146_MAGBIO Magnolia biondii HOM05D006153 ORTHO05D007701 4.4e-08 62.0 62 43.5
TPR.G8325 Trifolium pratense HOM05D006153 ORTHO05D007701 7.5e-08 61.2 32 71.9
Zm00001eb264740 Zea mays HOM05D006153 ORTHO05D007701 7.5e-08 61.2 74 41.9
ATR0030G019 Amborella trichopoda HOM05D006153 ORTHO05D007701 9.7e-08 60.8 45 53.3
Medtr5g005180 Medicago truncatula HOM05D006153 ORTHO05D007701 1.3e-07 60.5 68 41.2
HanXRQChr16g0514461 Helianthus annuus HOM05D006153 ORTHO05D007701 2.2e-07 59.7 41 58.5
HanXRQChr13g0425861 Helianthus annuus HOM05D006153 ORTHO05D007701 6.3e-07 58.2 41 53.7
Gohir.A13G045400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 1.1e-06 57.4 29 69.0
ECA234G4313 Erigeron canadensis HOM05D006153 ORTHO05D007701 1.4e-06 57.0 84 32.1
Aqoxy6G02750 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 3.1e-06 55.8 47 51.1


User provided reference genes

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