Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06614 Selenicereus undatus HOM05D006908 ORTHO05D008662 2.0e-206 722.2 369 100.0
EL10Ac9g22006 Beta vulgaris HOM05D006908 ORTHO05D008662 3.2e-116 422.5 324 67.3
Ah.01g005440 Amaranthus hybridus HOM05D006908 ORTHO05D008662 2.2e-112 409.8 317 65.6
Sc10g0007370 Simmondsia chinensis HOM05D006908 ORTHO05D008662 6.1e-107 391.7 330 63.0
AUR62042927 Chenopodium quinoa HOM05D006908 ORTHO05D008662 3.9e-106 389.0 355 60.3
Hma1.2p1_0323F.1_g125120 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 1.7e-104 383.6 356 55.9
QL05p023344 Quercus lobata HOM05D006908 ORTHO05D008662 4.1e-103 379.0 334 57.2
Haze_16403 Corylus avellana HOM05D006908 ORTHO05D008662 3.5e-102 375.9 322 58.4
CiPaw.01G238600 Carya illinoinensis HOM05D006908 ORTHO05D008662 7.7e-102 374.8 323 59.1
Dinv38042 Davidia involucrata HOM05D006908 ORTHO05D008662 1.0e-101 374.4 323 59.1
Lj5C59T9 Lonicera japonica HOM05D006908 ORTHO05D008662 1.7e-101 373.6 318 61.0
GSVIVG01017098001 Vitis vinifera HOM05D006908 ORTHO05D008662 2.2e-101 373.2 319 60.5
Nn8g39204 Nelumbo nucifera HOM05D006908 ORTHO05D008662 6.5e-101 371.7 357 56.9
MD17G1194300 Malus domestica HOM05D006908 ORTHO05D008662 1.2e-99 367.5 323 60.1
PSO782G4818 Papaver somniferum HOM05D006908 ORTHO05D008662 2.7e-99 366.3 320 60.3
FvH4_6g31280 Fragaria vesca HOM05D006908 ORTHO05D008662 8.0e-99 364.8 329 58.1
Atru.chr1.3281 Acer truncatum HOM05D006908 ORTHO05D008662 1.8e-98 363.6 322 57.1
Actinidia01807 Actinidia chinensis HOM05D006908 ORTHO05D008662 2.3e-98 363.2 321 58.6
FAN09G3067 Fragaria x ananassa HOM05D006908 ORTHO05D008662 8.8e-98 361.3 330 57.3
PSO063G2605 Papaver somniferum HOM05D006908 ORTHO05D008662 4.4e-97 359.0 318 58.5
Rhsim08G0222000 Rhododendron simsii HOM05D006908 ORTHO05D008662 9.7e-97 357.8 339 56.6
RcHm_v2.0_Chr2g0138011 Rosa chinensis HOM05D006908 ORTHO05D008662 9.7e-97 357.8 338 56.2
Ca_01120_v3 Cicer arietinum L. HOM05D006908 ORTHO05D008662 2.2e-96 356.7 326 56.4
Thecc.06G089400 Theobroma cacao HOM05D006908 ORTHO05D008662 2.2e-96 356.7 325 54.8
TPR.G37174 Trifolium pratense HOM05D006908 ORTHO05D008662 2.8e-96 356.3 326 57.1
Lj3g0017668 Lotus japonicus HOM05D006908 ORTHO05D008662 3.7e-96 355.9 319 56.4
SalBow2G2262 Salvia bowleyana HOM05D006908 ORTHO05D008662 4.8e-96 355.5 323 59.1
Duzib160G0703 Durio zibethinus HOM05D006908 ORTHO05D008662 1.1e-95 354.4 321 56.1
VMungo1080G1808 Vigna mungo HOM05D006908 ORTHO05D008662 1.4e-95 354.0 328 54.6
FAN05G1986 Fragaria x ananassa HOM05D006908 ORTHO05D008662 1.8e-95 353.6 333 56.2
COL.COLO4_30388 Corchorus olitorius HOM05D006908 ORTHO05D008662 5.3e-95 352.1 325 56.0
Medtr2g102040 Medicago truncatula HOM05D006908 ORTHO05D008662 5.3e-95 352.1 327 55.4
Nitab4.5_0002308g0060 Nicotiana tabacum HOM05D006908 ORTHO05D008662 5.3e-95 352.1 322 57.5
Phvul.005G170700 Phaseolus vulgaris HOM05D006908 ORTHO05D008662 5.3e-95 352.1 334 53.9
PGSC0003DMG400005687 Solanum tuberosum HOM05D006908 ORTHO05D008662 5.3e-95 352.1 324 58.0
Glyma.15G014900 Glycine max HOM05D006908 ORTHO05D008662 7.0e-95 351.7 317 55.5
Sabra01G0145800 Salix brachista HOM05D006908 ORTHO05D008662 1.2e-94 350.9 334 56.3
CAN.G438.72 Capsicum annuum HOM05D006908 ORTHO05D008662 2.0e-94 350.1 328 57.0
Gorai.006G098400 Gossypium raimondii HOM05D006908 ORTHO05D008662 2.7e-94 349.7 329 55.9
Oeu063957.2 Olea europaea HOM05D006908 ORTHO05D008662 2.7e-94 349.7 313 58.8
Lalb_Chr22g0351301 Lupinus albus HOM05D006908 ORTHO05D008662 3.5e-94 349.4 321 56.1
DCAR_023055 Daucus carota HOM05D006908 ORTHO05D008662 4.5e-94 349.0 327 56.6
Migut.I00872 Erythranthe guttata HOM05D006908 ORTHO05D008662 1.7e-93 347.1 323 56.3
vmacro18903 Vaccinium macrocarpon HOM05D006908 ORTHO05D008662 2.9e-93 346.3 378 51.6
HanXRQChr02g0032801 Helianthus annuus HOM05D006908 ORTHO05D008662 6.5e-93 345.1 322 55.9
Cc04_g03340 Coffea canephora HOM05D006908 ORTHO05D008662 8.5e-93 344.7 326 57.1
Sopen03g039000 Solanum pennellii HOM05D006908 ORTHO05D008662 8.5e-93 344.7 324 57.4
Manes.11G045900 Manihot esculenta HOM05D006908 ORTHO05D008662 2.5e-92 343.2 317 58.0
ECA247G1365 Erigeron canadensis HOM05D006908 ORTHO05D008662 3.2e-92 342.8 363 52.9
arahy.Tifrunner.gnm1.ann1.0IDI1A Arachis hypogaea HOM05D006908 ORTHO05D008662 4.2e-92 342.4 314 55.4
arahy.Tifrunner.gnm1.ann1.UK934I Arachis hypogaea HOM05D006908 ORTHO05D008662 4.2e-92 342.4 314 55.4
MSTRG.11073 Avicennia marina HOM05D006908 ORTHO05D008662 7.2e-92 341.7 348 54.6
AUR62016450 Chenopodium quinoa HOM05D006908 ORTHO05D008662 1.6e-91 340.5 281 63.7
ClCG07G013040 Citrullus lanatus HOM05D006908 ORTHO05D008662 2.1e-91 340.1 332 56.3
MELO3C012958.2 Cucumis melo HOM05D006908 ORTHO05D008662 3.6e-91 339.3 328 56.4
TAR626G0624 Trochodendron aralioides HOM05D006908 ORTHO05D008662 3.6e-91 339.3 344 55.5
Ciclev10025928m.g Citrus clementina HOM05D006908 ORTHO05D008662 1.0e-90 337.8 357 52.4
CsaV3_3G025130 Cucumis sativus L. HOM05D006908 ORTHO05D008662 1.0e-90 337.8 328 56.4
Sed0021689 Sechium edule HOM05D006908 ORTHO05D008662 1.4e-90 337.4 332 56.0
Eucgr.J02986 Eucalyptus grandis HOM05D006908 ORTHO05D008662 2.3e-90 336.7 310 55.5
CANSAT56G3342 Cannabis sativa HOM05D006908 ORTHO05D008662 7.5e-89 331.6 310 55.2
Prupe.3G070300 Prunus persica HOM05D006908 ORTHO05D008662 9.8e-89 331.3 328 54.6
Aqoxy7G01689 Aquilegia oxysepala HOM05D006908 ORTHO05D008662 2.4e-87 326.6 335 54.0
HPP92_003725 Vanilla planifolia HOM05D006908 ORTHO05D008662 2.4e-87 326.6 307 54.4
Psat5g298720 Pisum sativum HOM05D006908 ORTHO05D008662 4.1e-87 325.9 272 58.1
Sp5g35850 Schrenkiella parvula HOM05D006908 ORTHO05D008662 4.1e-87 325.9 307 53.4
CDE02G0011 Ceratophyllum demersum HOM05D006908 ORTHO05D008662 1.6e-86 323.9 315 53.7
Solyc03g120130.4 Solanum lycopersicum HOM05D006908 ORTHO05D008662 4.5e-86 322.4 327 53.8
PGR102G2040 Punica granatum HOM05D006908 ORTHO05D008662 7.7e-86 321.6 321 52.6
Carub.0002s2758 Capsella rubella HOM05D006908 ORTHO05D008662 1.7e-85 320.5 316 52.2
CSS0010187 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 2.3e-85 320.1 266 61.7
unitig_52.g17450 Utricularia gibba HOM05D006908 ORTHO05D008662 1.9e-84 317.0 314 52.2
Thhalv10018901m.g Eutrema salsugineum HOM05D006908 ORTHO05D008662 9.5e-84 314.7 317 51.4
Zm00001eb275430 Zea mays HOM05D006908 ORTHO05D008662 3.6e-83 312.8 342 48.2
Gohir.D09G082700 Gossypium hirsutum HOM05D006908 ORTHO05D008662 6.1e-83 312.0 329 52.3
Gohir.A09G082800 Gossypium hirsutum HOM05D006908 ORTHO05D008662 4.0e-82 309.3 319 52.4
BcaC08g47592 Brassica carinata HOM05D002960 ORTHO05D003632 4.4e-81 305.8 314 51.0
Os06g0639300 Oryza sativa ssp. japonica HOM05D006908 ORTHO05D008662 1.7e-80 303.9 335 47.2
Aa31LG4G230 Aethionema arabicum HOM05D006908 ORTHO05D008662 8.3e-80 301.6 342 48.2
THA.LOC104812520 Tarenaya hassleriana HOM05D006908 ORTHO05D008662 1.8e-79 300.4 338 49.1
BcaC08g47561 Brassica carinata HOM05D006908 ORTHO05D008662 4.1e-79 299.3 310 51.6
CARHR074570 Cardamine hirsuta HOM05D006908 ORTHO05D008662 4.1e-79 299.3 318 49.7
Peaxi162Scf00015g00453 Petunia axillaris HOM05D006908 ORTHO05D008662 4.1e-79 299.3 333 50.2
TWI75G1463 Tripterygium wilfordii HOM05D006908 ORTHO05D008662 2.7e-78 296.6 320 49.7
SEGI_13943 Sequoiadendron giganteum HOM05D006908 ORTHO05D008662 4.5e-78 295.8 353 46.7
AT1G79915 Arabidopsis thaliana HOM05D006908 ORTHO05D008662 1.7e-77 293.9 316 50.3
C06p54330 Brassica napus HOM05D002960 ORTHO05D003632 1.7e-77 293.9 348 46.8
Nitab4.5_0000671g0150 Nicotiana tabacum HOM05D006908 ORTHO05D008662 2.3e-77 293.5 323 51.1
Potri.001G181200 Populus trichocarpa HOM05D006908 ORTHO05D008662 5.0e-77 292.4 281 56.6
BolC6t40444H Brassica oleracea HOM05D002960 ORTHO05D003632 8.6e-77 291.6 340 47.1
Hma1.2p1_0323F.1_g125130 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 6.1e-75 285.4 353 46.7
BraA07t32051Z Brassica rapa HOM05D006908 ORTHO05D008662 7.5e-73 278.5 321 48.9
ATR0602G186 Amborella trichopoda HOM05D006908 ORTHO05D008662 2.2e-72 276.9 245 54.3
Cfa002075 Carpinus fangiana HOM05D006908 ORTHO05D008662 5.4e-71 272.3 240 58.3
AUR62033073 Chenopodium quinoa HOM05D006908 ORTHO05D008662 8.6e-69 265.0 286 53.5
Mapoly0072s0004 Marchantia polymorpha HOM05D006908 ORTHO05D008662 9.5e-68 261.5 336 45.8
SHI10939 Sapria himalayana HOM05D006908 ORTHO05D008662 2.1e-67 260.4 249 54.2
MBI15_g13424_MAGBIO Magnolia biondii HOM05D006908 ORTHO05D008662 2.0e-65 253.8 275 51.6
Cpa.g.sc0.185 Carica papaya HOM05D006908 ORTHO05D008662 1.3e-64 251.1 216 59.3
AagrBONN_evm.TU.Sc2ySwM_344.5185 Anthoceros agrestis HOM05D006908 ORTHO05D008662 1.6e-62 244.2 328 44.2
A07p45490 Brassica napus HOM05D006908 ORTHO05D008662 6.0e-62 242.3 371 40.7
Pp3c16_8290 Physcomitrium patens HOM05D006908 ORTHO05D008662 5.1e-61 239.2 375 37.9
CBR_g20274 Chara braunii HOM05D006908 ORTHO05D008662 4.3e-60 236.1 322 40.7
Lsat_1_v5_gn_1_35121 Lactuca sativa HOM05D006908 ORTHO05D008662 4.0e-58 229.6 213 55.4
CSS0029579 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 3.6e-51 206.5 182 57.1
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 1.2e-46 191.4 318 39.0
FAN02G3381 Fragaria x ananassa HOM05D006908 ORTHO05D008662 3.2e-39 166.8 228 44.3
C09p24020 Brassica napus HOM05D006908 ORTHO05D008662 8.1e-35 152.1 178 45.5
SMO347G0515 Selaginella moellendorffii HOM05D006908 ORTHO05D008662 1.9e-31 141.0 204 42.6
SGA_v2.0_scaffold37G14828 Striga asiatica HOM05D006908 ORTHO05D008662 2.1e-30 137.5 143 56.6
BolC9t55322H Brassica oleracea HOM05D006908 ORTHO05D008662 3.3e-20 103.6 90 55.6
Actinidia32749 Actinidia chinensis HOM05D006908 ORTHO05D008662 2.1e-19 100.9 69 73.9
Cpa.g.sc41.12 Carica papaya HOM05D006908 ORTHO05D008662 1.8e-18 97.8 85 61.2
AL2G41640 Arabidopsis lyrata HOM05D006908 ORTHO05D008662 6.9e-18 95.9 157 36.9
Cre17.g747647 Chlamydomonas reinhardtii HOM05D002553 ORTHO05D002767 6.5e-08 62.8 191 30.9
CANSAT01G0215 Cannabis sativa HOM05D006745 ORTHO05D008449 9.4e-07 58.9 190 28.9
Cpa.g.c43825 Carica papaya HOM05D006908 ORTHO05D008662 1.2e-06 58.5 34 79.4
Mapoly0041s0084 Marchantia polymorpha HOM05D006745 ORTHO05D008449 1.6e-06 58.2 159 28.3
CsaV3_6G047410 Cucumis sativus L. HOM05D006745 ORTHO05D008449 7.9e-06 55.8 187 27.3
MD15G1238900 Malus domestica HOM05D006745 ORTHO05D008449 7.9e-06 55.8 187 29.4
Pp3c3_3430 Physcomitrium patens HOM05D002956 ORTHO05D008031 7.9e-06 55.8 170 28.8


User provided reference genes

Program Settings