Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06567 Selenicereus undatus HOM05D002758 ORTHO05D002885 1.2e-65 253.1 135 100.0
Hund00526 Selenicereus undatus HOM05D002758 ORTHO05D002885 4.9e-22 108.2 144 52.8
vmacro18989 Vaccinium macrocarpon HOM05D002758 ORTHO05D002885 2.1e-17 92.8 140 44.3
Dinv30594 Davidia involucrata HOM05D002758 ORTHO05D002885 8.4e-14 80.9 140 42.9
Oeu027807.1 Olea europaea HOM05D002758 ORTHO05D002885 4.2e-13 78.6 143 40.6
Sc10g0005850 Simmondsia chinensis HOM05D002758 ORTHO05D002885 4.2e-13 78.6 152 40.1
CSS0041896 Camellia sinensis var. sinensis HOM05D002758 ORTHO05D002885 7.1e-13 77.8 137 43.1
EL10Ac9g21912 Beta vulgaris HOM05D002758 ORTHO05D002885 1.6e-12 76.6 144 44.4
Atru.chr1.2990 Acer truncatum HOM05D002758 ORTHO05D002885 2.1e-12 76.3 141 41.1
Cc04_g04270 Coffea canephora HOM05D002758 ORTHO05D002885 2.7e-12 75.9 136 44.9
Actinidia15774 Actinidia chinensis HOM05D002758 ORTHO05D002885 4.6e-12 75.1 136 40.4
Gohir.A07G036200 Gossypium hirsutum HOM05D002758 ORTHO05D002885 7.9e-12 74.3 146 41.8
TAR626G0616 Trochodendron aralioides HOM05D002758 ORTHO05D002885 1.0e-11 73.9 138 44.2
FAN14G2484 Fragaria x ananassa HOM05D002758 ORTHO05D002885 1.3e-11 73.6 135 37.0
Actinidia01753 Actinidia chinensis HOM05D002758 ORTHO05D002885 1.8e-11 73.2 137 40.9
MSTRG.11135 Avicennia marina HOM05D002758 ORTHO05D002885 1.8e-11 73.2 140 40.0
FAN02G3379 Fragaria x ananassa HOM05D002758 ORTHO05D002885 1.8e-11 73.2 135 37.0
GSVIVG01017318001 Vitis vinifera HOM05D002758 ORTHO05D002885 1.8e-11 73.2 144 38.9
FvH4_6g29910 Fragaria vesca HOM05D002758 ORTHO05D002885 2.3e-11 72.8 135 37.0
Gorai.001G042500 Gossypium raimondii HOM05D002758 ORTHO05D002885 2.3e-11 72.8 146 39.7
Gohir.A10G074300 Gossypium hirsutum HOM05D002758 ORTHO05D002885 3.0e-11 72.4 143 37.8
MD17G1209300 Malus domestica HOM05D002758 ORTHO05D002885 3.9e-11 72.0 141 39.0
TAR383G0328 Trochodendron aralioides HOM05D002758 ORTHO05D002885 3.9e-11 72.0 127 45.7
Hma1.2p1_1962F.1_g309250 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 6.7e-11 71.2 139 41.7
Manes.04G113800 Manihot esculenta HOM05D002758 ORTHO05D002885 6.7e-11 71.2 153 39.2
TWI18G1221 Tripterygium wilfordii HOM05D002758 ORTHO05D002885 6.7e-11 71.2 147 40.1
Nn8g39466 Nelumbo nucifera HOM05D002758 ORTHO05D002885 1.1e-10 70.5 142 40.1
Duzib235G1225 Durio zibethinus HOM05D002758 ORTHO05D002885 1.5e-10 70.1 143 36.4
Medtr4g010530 Medicago truncatula HOM05D002758 ORTHO05D002885 1.9e-10 69.7 130 40.8
arahy.Tifrunner.gnm1.ann1.FSE12S Arachis hypogaea HOM05D002758 ORTHO05D002885 2.5e-10 69.3 132 40.2
COL.COLO4_12950 Corchorus olitorius HOM05D002758 ORTHO05D002885 2.5e-10 69.3 143 37.8
FAN05G1526 Fragaria x ananassa HOM05D002758 ORTHO05D002885 3.3e-10 68.9 133 35.3
Prupe.3G084900 Prunus persica HOM05D002758 ORTHO05D002885 3.3e-10 68.9 135 38.5
Thecc.06G021700 Theobroma cacao HOM05D002758 ORTHO05D002885 4.3e-10 68.6 141 36.9
Cpa.g.sc10.256 Carica papaya HOM05D002758 ORTHO05D002885 5.6e-10 68.2 145 35.9
Glyma.08G211800 Glycine max HOM05D002758 ORTHO05D002885 5.6e-10 68.2 148 35.8
Glyma.13G365000 Glycine max HOM05D002758 ORTHO05D002885 5.6e-10 68.2 133 40.6
Ciclev10026775m.g Citrus clementina HOM05D002758 ORTHO05D002885 7.4e-10 67.8 139 36.0
Glyma.07G031000 Glycine max HOM05D002758 ORTHO05D002885 7.4e-10 67.8 143 38.5
Gohir.D10G077100 Gossypium hirsutum HOM05D002758 ORTHO05D002885 7.4e-10 67.8 143 35.7
Nn2g12045 Nelumbo nucifera HOM05D002758 ORTHO05D002885 7.4e-10 67.8 142 38.7
Rhsim01G0069000 Rhododendron simsii HOM05D002758 ORTHO05D002885 7.4e-10 67.8 155 39.4
RcHm_v2.0_Chr2g0135861 Rosa chinensis HOM05D002758 ORTHO05D002885 7.4e-10 67.8 137 35.0
Lalb_Chr07g0178991 Lupinus albus HOM05D002758 ORTHO05D002885 9.6e-10 67.4 133 41.4
Gohir.D07G040200 Gossypium hirsutum HOM05D002758 ORTHO05D002885 1.3e-09 67.0 146 39.0
arahy.Tifrunner.gnm1.ann1.75SBZZ Arachis hypogaea HOM05D002758 ORTHO05D002885 1.6e-09 66.6 143 38.5
Manes.11G055700 Manihot esculenta HOM05D002758 ORTHO05D002885 2.8e-09 65.9 142 39.4
PSO210G4958 Papaver somniferum HOM05D002758 ORTHO05D002885 4.8e-09 65.1 148 38.5
arahy.Tifrunner.gnm1.ann1.4I3R3X Arachis hypogaea HOM05D002758 ORTHO05D002885 6.2e-09 64.7 144 36.1
arahy.Tifrunner.gnm1.ann1.66WDLV Arachis hypogaea HOM05D002758 ORTHO05D002885 6.2e-09 64.7 132 37.1
Phvul.010G155100 Phaseolus vulgaris HOM05D002758 ORTHO05D002885 8.2e-09 64.3 141 37.6
VMungo1215G1272 Vigna mungo HOM05D002758 ORTHO05D002885 8.2e-09 64.3 136 37.5
Migut.I00776 Erythranthe guttata HOM05D002758 ORTHO05D002885 1.1e-08 63.9 145 41.4
Gorai.011G083300 Gossypium raimondii HOM05D002758 ORTHO05D002885 1.1e-08 63.9 134 35.8
Hma1.2p1_0018F.1_g012340 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 1.1e-08 63.9 141 39.0
TPR.G38648 Trifolium pratense HOM05D002758 ORTHO05D002885 1.1e-08 63.9 138 37.7
Duzib160G0702 Durio zibethinus HOM05D002758 ORTHO05D002885 1.4e-08 63.5 137 35.8
Actinidia40476 Actinidia chinensis HOM05D002758 ORTHO05D002885 1.8e-08 63.2 144 39.6
CARHR090850 Cardamine hirsuta HOM05D002758 ORTHO05D002885 1.8e-08 63.2 144 36.8
Nitab4.5_0005728g0010 Nicotiana tabacum HOM05D002758 ORTHO05D002885 1.8e-08 63.2 143 39.9
Oeu034104.1 Olea europaea HOM05D002758 ORTHO05D002885 1.8e-08 63.2 143 37.1
Hund26508 Selenicereus undatus HOM05D002758 ORTHO05D002885 1.8e-08 63.2 142 41.5
AL3G28420 Arabidopsis lyrata HOM05D002758 ORTHO05D002885 2.4e-08 62.8 145 36.6
arahy.Tifrunner.gnm1.ann1.R8JN66 Arachis hypogaea HOM05D002758 ORTHO05D002885 2.4e-08 62.8 132 37.1
BcaC09g48555 Brassica carinata HOM05D002758 ORTHO05D002885 2.4e-08 62.8 146 37.0
C01p48670 Brassica napus HOM05D002758 ORTHO05D002885 2.4e-08 62.8 146 37.0
BolC1t04821H Brassica oleracea HOM05D002758 ORTHO05D002885 2.4e-08 62.8 146 37.0
MD15G1172200 Malus domestica HOM05D002758 ORTHO05D002885 2.4e-08 62.8 147 40.1
Peaxi162Scf00332g00756 Petunia axillaris HOM05D002758 ORTHO05D002885 2.4e-08 62.8 143 36.4
Aqoxy7G03691 Aquilegia oxysepala HOM05D002758 ORTHO05D002885 3.1e-08 62.4 145 37.9
Lalb_Chr13g0301821 Lupinus albus HOM05D002758 ORTHO05D002885 3.1e-08 62.4 138 39.9
BcaC08g44003 Brassica carinata HOM05D002758 ORTHO05D002885 4.0e-08 62.0 142 38.0
Gorai.009G130900 Gossypium raimondii HOM05D002758 ORTHO05D002885 4.0e-08 62.0 141 34.0
Potri.001G192800 Populus trichocarpa HOM05D002758 ORTHO05D002885 4.0e-08 62.0 150 34.0
vmacro20564 Vaccinium macrocarpon HOM05D002758 ORTHO05D002885 4.0e-08 62.0 146 36.3
VMungo1080G1568 Vigna mungo HOM05D002758 ORTHO05D002885 4.0e-08 62.0 134 36.6
Duzib187G0530 Durio zibethinus HOM05D002758 ORTHO05D002885 6.9e-08 61.2 151 37.1
Gohir.A05G125833 Gossypium hirsutum HOM05D002758 ORTHO05D002885 6.9e-08 61.2 145 33.8
Gohir.A05G125900 Gossypium hirsutum HOM05D002758 ORTHO05D002885 6.9e-08 61.2 145 33.8
AT3G15760 Arabidopsis thaliana HOM05D002758 ORTHO05D002885 9.0e-08 60.8 144 37.5
PSO210G1692 Papaver somniferum HOM05D002758 ORTHO05D002885 9.0e-08 60.8 147 35.4
Duzib150G0461 Durio zibethinus HOM05D002758 ORTHO05D002885 1.2e-07 60.5 136 36.0
Phvul.003G165200 Phaseolus vulgaris HOM05D002758 ORTHO05D002885 1.2e-07 60.5 134 37.3
AUR62011138 Chenopodium quinoa HOM05D002758 ORTHO05D002885 1.5e-07 60.1 137 38.7
Nitab4.5_0000373g0020 Nicotiana tabacum HOM05D002758 ORTHO05D002885 1.5e-07 60.1 136 40.4
Potri.006G069100 Populus trichocarpa HOM05D002758 ORTHO05D002885 1.5e-07 60.1 140 37.1
Prupe.7G243900 Prunus persica HOM05D002758 ORTHO05D002885 1.5e-07 60.1 161 36.0
QL05p029455 Quercus lobata HOM05D002758 ORTHO05D002885 1.5e-07 60.1 137 36.5
A05p18910 Brassica napus HOM05D002758 ORTHO05D002885 2.0e-07 59.7 142 38.0
CSS0022572 Camellia sinensis var. sinensis HOM05D002758 ORTHO05D002885 2.0e-07 59.7 163 37.4
Gohir.D05G126800 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.0e-07 59.7 145 33.1
SGA_v2.0_scaffold5G02683 Striga asiatica HOM05D002758 ORTHO05D002885 2.0e-07 59.7 144 35.4
Actinidia21981 Actinidia chinensis HOM05D002758 ORTHO05D002885 2.6e-07 59.3 146 39.0
BcaC08g43430 Brassica carinata HOM05D002758 ORTHO05D002885 3.4e-07 58.9 142 35.2
Potri.018G131100 Populus trichocarpa HOM05D002758 ORTHO05D002885 3.4e-07 58.9 141 38.3
Sed0016169 Sechium edule HOM05D002758 ORTHO05D002885 3.4e-07 58.9 145 34.5
Sopen03g035550 Solanum pennellii HOM05D002758 ORTHO05D002885 3.4e-07 58.9 143 37.1
VMungo0331G0585 Vigna mungo HOM05D002758 ORTHO05D002885 3.4e-07 58.9 140 35.0
A05p33610 Brassica napus HOM05D002758 ORTHO05D002885 4.5e-07 58.5 146 37.0
C05p50610 Brassica napus HOM05D002758 ORTHO05D002885 4.5e-07 58.5 146 37.0
BraA05t22185Z Brassica rapa HOM05D002758 ORTHO05D002885 4.5e-07 58.5 146 37.0
CDE04G0331 Ceratophyllum demersum HOM05D002758 ORTHO05D002885 4.5e-07 58.5 137 37.2
MD02G1030600 Malus domestica HOM05D002758 ORTHO05D002885 4.5e-07 58.5 151 37.1
PSO170G3914 Papaver somniferum HOM05D002758 ORTHO05D002885 4.5e-07 58.5 141 34.8
Hma1.2p1_1962F.1_g309240 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 5.8e-07 58.2 133 37.6
Hma1.2p1_3201F.1_g333909 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 5.8e-07 58.2 133 37.6
Hund09249 Selenicereus undatus HOM05D002758 ORTHO05D002885 5.8e-07 58.2 140 37.1
BolC6t35882H Brassica oleracea HOM05D002758 ORTHO05D002885 7.6e-07 57.8 144 33.3
Ciclev10009903m.g Citrus clementina HOM05D002758 ORTHO05D002885 7.6e-07 57.8 144 38.9
BcaB04g20905 Brassica carinata HOM05D002758 ORTHO05D002885 1.0e-06 57.4 145 34.5
BcaC08g43429 Brassica carinata HOM05D002758 ORTHO05D002885 1.0e-06 57.4 144 33.3
MBI04_g24597_MAGBIO Magnolia biondii HOM05D002758 ORTHO05D002885 1.0e-06 57.4 130 36.9
Psat7g255440 Pisum sativum HOM05D002758 ORTHO05D002885 1.0e-06 57.4 144 34.7
EL10Ac8g18667 Beta vulgaris HOM05D002758 ORTHO05D002885 1.3e-06 57.0 143 40.6
BolC5t33807H Brassica oleracea HOM05D002758 ORTHO05D002885 1.3e-06 57.0 146 36.3
Glyma.04G147200 Glycine max HOM05D002758 ORTHO05D002885 1.3e-06 57.0 149 39.6
Gohir.A05G016000 Gossypium hirsutum HOM05D002758 ORTHO05D002885 1.3e-06 57.0 140 37.9
Gohir.D05G017100 Gossypium hirsutum HOM05D002758 ORTHO05D002885 1.3e-06 57.0 140 37.9
Gorai.009G017300 Gossypium raimondii HOM05D002758 ORTHO05D002885 1.3e-06 57.0 140 37.9
Carub.0003s1550 Capsella rubella HOM05D002758 ORTHO05D002885 1.7e-06 56.6 144 36.1
Psat4g039800 Pisum sativum HOM05D002758 ORTHO05D002885 1.7e-06 56.6 136 36.8
Nitab4.5_0001764g0140 Nicotiana tabacum HOM05D002758 ORTHO05D002885 2.2e-06 56.2 139 38.1
BcaC05g28933 Brassica carinata HOM05D002758 ORTHO05D002885 2.9e-06 55.8 146 37.7
CiPaw.01G246400 Carya illinoinensis HOM05D002758 ORTHO05D002885 2.9e-06 55.8 138 34.1
CANSAT56G1388 Cannabis sativa HOM05D002758 ORTHO05D002885 4.9e-06 55.1 155 34.8
Manes.06G058000 Manihot esculenta HOM05D002758 ORTHO05D002885 6.5e-06 54.7 154 38.3
Solyc03g116630.3 Solanum lycopersicum HOM05D002758 ORTHO05D002885 6.5e-06 54.7 143 35.0
Nitab4.5_0000028g0360 Nicotiana tabacum HOM05D002758 ORTHO05D002885 8.4e-06 54.3 156 32.1
Psat5g302120 Pisum sativum HOM05D002758 ORTHO05D002885 8.4e-06 54.3 146 32.9


User provided reference genes

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