Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06552 Selenicereus undatus HOM05D007527 ORTHO05D009523 9.8e-69 263.5 145 100.0
GSVIVG01017356001 Vitis vinifera HOM05D007527 ORTHO05D009523 5.1e-17 91.7 102 53.9
TWI12G0113 Tripterygium wilfordii HOM05D007527 ORTHO05D009523 1.1e-16 90.5 104 50.0
TAR383G1076 Trochodendron aralioides HOM05D007527 ORTHO05D009523 9.7e-16 87.4 143 46.9
Potri.001G202000 Populus trichocarpa HOM05D007527 ORTHO05D009523 2.8e-15 85.9 73 65.8
Ciclev10026543m.g Citrus clementina HOM05D007527 ORTHO05D009523 6.3e-15 84.7 145 42.8
Hma1.2p1_0242F.1_g100670 Hydrangea macrophylla HOM05D007527 ORTHO05D009523 8.2e-15 84.3 103 52.4
Atru.chr1.2902 Acer truncatum HOM05D007527 ORTHO05D009523 1.8e-14 83.2 143 44.8
Gohir.A09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 1.2e-13 80.5 56 73.2
Gohir.D09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 1.2e-13 80.5 56 73.2
Gorai.006G101400 Gossypium raimondii HOM05D007527 ORTHO05D009523 1.2e-13 80.5 56 73.2
Actinidia15754 Actinidia chinensis HOM05D007527 ORTHO05D009523 2.6e-13 79.3 103 50.5
Manes.11G058100 Manihot esculenta HOM05D007527 ORTHO05D009523 4.5e-13 78.6 68 58.8
CSS0000513 Camellia sinensis var. sinensis HOM05D007527 ORTHO05D009523 5.9e-13 78.2 87 50.6
Os02g0804400 Oryza sativa ssp. japonica HOM05D007527 ORTHO05D009523 5.9e-13 78.2 67 65.7
Duzib160G0519 Durio zibethinus HOM05D007527 ORTHO05D009523 7.7e-13 77.8 75 57.3
Eucgr.B02436 Eucalyptus grandis HOM05D007527 ORTHO05D009523 7.7e-13 77.8 88 55.7
Sabra03G0018000 Salix brachista HOM05D007527 ORTHO05D009523 7.7e-13 77.8 72 58.3
Dinv30616 Davidia involucrata HOM05D007527 ORTHO05D009523 1.0e-12 77.4 87 55.2
vmacro16881 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 1.0e-12 77.4 86 52.3
CiPaw.01G249100 Carya illinoinensis HOM05D007527 ORTHO05D009523 1.3e-12 77.0 81 50.6
PGR102G2450 Punica granatum HOM05D007527 ORTHO05D009523 1.3e-12 77.0 85 49.4
CDE03G0516 Ceratophyllum demersum HOM05D007527 ORTHO05D009523 1.7e-12 76.6 57 68.4
COL.COLO4_11916 Corchorus olitorius HOM05D007527 ORTHO05D009523 1.7e-12 76.6 142 40.8
Lsat_1_v5_gn_5_131420 Lactuca sativa HOM05D007527 ORTHO05D009523 1.7e-12 76.6 84 54.8
Thecc.06G029900 Theobroma cacao HOM05D007527 ORTHO05D009523 2.2e-12 76.3 116 39.7
CDE04G3040 Ceratophyllum demersum HOM05D002695 ORTHO05D002964 5.0e-12 75.1 99 45.5
CsaV3_4G001960 Cucumis sativus L. HOM05D007527 ORTHO05D009523 5.0e-12 75.1 75 54.7
MSTRG.5063 Avicennia marina HOM05D007527 ORTHO05D009523 6.5e-12 74.7 99 50.5
MELO3C017840.2 Cucumis melo HOM05D007527 ORTHO05D009523 6.5e-12 74.7 76 53.9
Thhalv10021721m.g Eutrema salsugineum HOM05D007527 ORTHO05D009523 6.5e-12 74.7 126 40.5
Rhsim12G0190600 Rhododendron simsii HOM05D007527 ORTHO05D009523 1.4e-11 73.6 86 51.2
BcaB04g20897 Brassica carinata HOM05D007527 ORTHO05D009523 1.9e-11 73.2 71 50.7
HanXRQChr10g0302821 Helianthus annuus HOM05D007527 ORTHO05D009523 1.9e-11 73.2 66 57.6
PSO170G5637 Papaver somniferum HOM05D007527 ORTHO05D009523 1.9e-11 73.2 57 66.7
Manes.04G111800 Manihot esculenta HOM05D007527 ORTHO05D009523 2.5e-11 72.8 128 36.7
Migut.N01835 Erythranthe guttata HOM05D007527 ORTHO05D009523 3.2e-11 72.4 83 50.6
MBI15_g00959_MAGBIO Magnolia biondii HOM05D007527 ORTHO05D009523 3.2e-11 72.4 65 58.5
ECA234G1859 Erigeron canadensis HOM05D007527 ORTHO05D009523 4.2e-11 72.0 61 60.7
MD17G1213600 Malus domestica HOM05D007527 ORTHO05D009523 4.2e-11 72.0 150 40.0
PSO017G1806 Papaver somniferum HOM05D007527 ORTHO05D009523 4.2e-11 72.0 56 67.9
Sed0020992 Sechium edule HOM05D007527 ORTHO05D009523 4.2e-11 72.0 62 58.1
FAN09G0177 Fragaria x ananassa HOM05D007527 ORTHO05D009523 5.5e-11 71.6 85 48.2
Sp3g14230 Schrenkiella parvula HOM05D007527 ORTHO05D009523 5.5e-11 71.6 128 39.1
Ah.01g006590 Amaranthus hybridus HOM05D007527 ORTHO05D009523 9.4e-11 70.9 79 50.6
Haze_16571 Corylus avellana HOM05D007527 ORTHO05D009523 9.4e-11 70.9 52 69.2
FAN05G4324 Fragaria x ananassa HOM05D007527 ORTHO05D009523 9.4e-11 70.9 73 50.7
Psat5g303480 Pisum sativum HOM05D007527 ORTHO05D009523 9.4e-11 70.9 117 39.3
vmacro07515 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 9.4e-11 70.9 82 48.8
A01p38200 Brassica napus HOM05D007527 ORTHO05D009523 1.2e-10 70.5 74 52.7
BraA01t03878Z Brassica rapa HOM05D007527 ORTHO05D009523 1.2e-10 70.5 74 52.7
Cfa001953 Carpinus fangiana HOM05D007527 ORTHO05D009523 1.2e-10 70.5 59 61.0
Zm00001eb192090 Zea mays HOM05D007527 ORTHO05D009523 1.2e-10 70.5 60 66.7
ATR0716G018 Amborella trichopoda HOM05D007527 ORTHO05D009523 1.6e-10 70.1 59 61.0
Aqoxy7G01859 Aquilegia oxysepala HOM05D007527 ORTHO05D009523 1.6e-10 70.1 87 46.0
BcaC09g48568 Brassica carinata HOM05D007527 ORTHO05D009523 1.6e-10 70.1 74 52.7
C01p48470 Brassica napus HOM05D007527 ORTHO05D009523 1.6e-10 70.1 74 52.7
BolC1t04807H Brassica oleracea HOM05D007527 ORTHO05D009523 1.6e-10 70.1 74 52.7
FvH4_6g29470 Fragaria vesca HOM05D007527 ORTHO05D009523 1.6e-10 70.1 85 48.2
FAN02G0939 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.6e-10 70.1 85 48.2
Sc07g0004280 Simmondsia chinensis HOM05D007527 ORTHO05D009523 1.6e-10 70.1 145 40.0
DCAR_021351 Daucus carota HOM05D002695 ORTHO05D002964 2.1e-10 69.7 102 45.1
Lalb_Chr24g0395451 Lupinus albus HOM05D007527 ORTHO05D009523 2.1e-10 69.7 83 51.8
RcHm_v2.0_Chr2g0134671 Rosa chinensis HOM05D007527 ORTHO05D009523 2.1e-10 69.7 59 59.3
ClCG07G012200 Citrullus lanatus HOM05D007527 ORTHO05D009523 2.7e-10 69.3 144 38.2
Nn8g39533 Nelumbo nucifera HOM05D007527 ORTHO05D009523 2.7e-10 69.3 56 60.7
Prupe.3G089500 Prunus persica HOM05D007527 ORTHO05D009523 2.7e-10 69.3 69 53.6
FAN14G2734 Fragaria x ananassa HOM05D007527 ORTHO05D009523 3.6e-10 68.9 85 47.1
Aa31LG8G3080 Aethionema arabicum HOM05D007527 ORTHO05D009523 6.1e-10 68.2 66 50.0
Nitab4.5_0003463g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 6.1e-10 68.2 82 51.2
VMungo1080G0810 Vigna mungo HOM05D007527 ORTHO05D009523 6.1e-10 68.2 62 59.7
arahy.Tifrunner.gnm1.ann1.HBF5UW Arachis hypogaea HOM05D007527 ORTHO05D009523 1.0e-09 67.4 61 59.0
arahy.Tifrunner.gnm1.ann1.JM0XW1 Arachis hypogaea HOM05D007527 ORTHO05D009523 1.0e-09 67.4 61 59.0
Cpa.g.sc67.40 Carica papaya HOM05D007527 ORTHO05D009523 1.0e-09 67.4 102 41.2
Peaxi162Scf00332g00530 Petunia axillaris HOM05D007527 ORTHO05D009523 1.4e-09 67.0 86 48.8
RcHm_v2.0_Chr2g0134751 Rosa chinensis HOM05D007527 ORTHO05D009523 1.4e-09 67.0 74 48.6
CAN.G407.74 Capsicum annuum HOM05D007527 ORTHO05D009523 2.3e-09 66.2 105 42.9
Glyma.15G006800 Glycine max HOM05D007527 ORTHO05D009523 2.3e-09 66.2 58 63.8
SGA_v2.0_scaffold43G16304 Striga asiatica HOM05D007527 ORTHO05D009523 2.3e-09 66.2 83 49.4
AL3G28550 Arabidopsis lyrata HOM05D007527 ORTHO05D009523 3.9e-09 65.5 75 46.7
Lj3g0017680 Lotus japonicus HOM05D007527 ORTHO05D009523 3.9e-09 65.5 77 50.6
Nitab4.5_0008560g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 5.1e-09 65.1 90 44.4
RcHm_v2.0_Chr2g0134971 Rosa chinensis HOM05D007527 ORTHO05D009523 5.1e-09 65.1 54 61.1
Medtr2g104040 Medicago truncatula HOM05D007527 ORTHO05D009523 8.8e-09 64.3 66 53.0
Phvul.005G178900 Phaseolus vulgaris HOM05D007527 ORTHO05D009523 1.1e-08 63.9 64 54.7
AT3G15900 Arabidopsis thaliana HOM05D007527 ORTHO05D009523 1.5e-08 63.5 118 38.1
Cc04_g04490 Coffea canephora HOM05D007527 ORTHO05D009523 1.5e-08 63.5 146 34.9
CANSAT56G2488 Cannabis sativa HOM05D007527 ORTHO05D009523 2.0e-08 63.2 141 32.6
Carub.0003s1564 Capsella rubella HOM05D007527 ORTHO05D009523 4.3e-08 62.0 52 57.7
vmacro16888 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 4.3e-08 62.0 51 56.9
HPP92_017057 Vanilla planifolia HOM05D007527 ORTHO05D009523 5.7e-08 61.6 82 42.7
CARHR091010 Cardamine hirsuta HOM05D007527 ORTHO05D009523 1.3e-07 60.5 45 62.2
Sopen03g035730 Solanum pennellii HOM05D007527 ORTHO05D009523 1.3e-07 60.5 79 46.8
Mapoly0006s0085 Marchantia polymorpha HOM05D007527 ORTHO05D009523 4.8e-07 58.5 86 43.0
vmacro16886 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 4.8e-07 58.5 45 60.0
Solyc03g116800.4 Solanum lycopersicum HOM05D007527 ORTHO05D009523 2.4e-06 56.2 79 44.3
PGSC0003DMG400000643 Solanum tuberosum HOM05D007527 ORTHO05D009523 3.1e-06 55.8 82 43.9


User provided reference genes

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