Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 2.0e-72 275.8 154 100.0
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 1.7e-63 246.1 152 89.5
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 7.2e-62 240.7 152 86.8
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 3.0e-60 235.3 148 86.5
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 8.9e-60 233.8 152 85.5
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 4.9e-58 228.0 146 86.3
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 4.9e-58 228.0 151 84.1
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 2.4e-57 225.7 146 85.6
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 9.2e-57 223.8 146 85.6
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 1.2e-56 223.4 152 80.3
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.0e-56 222.6 145 85.5
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 2.7e-56 222.2 146 84.2
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 2.7e-56 222.2 147 84.4
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 4.6e-56 221.5 145 85.5
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 4.6e-56 221.5 145 85.5
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 5.9e-56 221.1 147 83.0
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 1.0e-55 220.3 146 80.1
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.0e-55 220.3 145 84.8
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 1.3e-55 219.9 146 82.9
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 1.3e-55 219.9 146 81.5
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 2.3e-55 219.2 146 80.1
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.9e-55 218.8 145 84.1
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.9e-55 218.8 145 84.1
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 2.9e-55 218.8 147 83.0
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 3.9e-55 218.4 152 78.9
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 5.0e-55 218.0 146 80.8
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 5.0e-55 218.0 151 77.5
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 8.6e-55 217.2 150 80.7
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 8.6e-55 217.2 150 80.7
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 1.1e-54 216.9 154 81.2
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 1.1e-54 216.9 146 82.9
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 1.1e-54 216.9 147 81.0
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 1.6e-53 213.0 149 78.5
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 1.6e-53 213.0 148 78.4
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 2.1e-53 212.6 151 79.5
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 2.8e-53 212.2 148 81.8
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 2.8e-53 212.2 147 78.9
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 2.8e-53 212.2 169 75.1
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 2.8e-53 212.2 154 75.3
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 3.6e-53 211.8 147 78.9
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 3.6e-53 211.8 147 79.6
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 4.7e-53 211.5 153 73.2
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 4.7e-53 211.5 148 80.4
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 8.0e-53 210.7 153 73.9
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 1.4e-52 209.9 153 72.5
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 1.4e-52 209.9 153 71.9
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 1.4e-52 209.9 153 72.5
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 1.4e-52 209.9 153 72.5
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 1.4e-52 209.9 153 72.5
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 1.4e-52 209.9 144 80.6
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 1.8e-52 209.5 153 73.2
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 1.8e-52 209.5 153 72.5
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 1.8e-52 209.5 148 79.1
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 1.8e-52 209.5 147 78.2
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 2.3e-52 209.1 153 72.5
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 3.1e-52 208.8 147 81.6
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 5.2e-52 208.0 153 72.5
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 6.8e-52 207.6 153 71.9
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 1.2e-51 206.8 139 82.0
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.2e-51 206.8 150 76.0
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.2e-51 206.8 150 76.0
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 1.5e-51 206.5 155 72.3
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 2.0e-51 206.1 150 75.3
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 2.6e-51 205.7 147 77.6
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 2.6e-51 205.7 153 71.2
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 4.4e-51 204.9 153 71.9
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 4.4e-51 204.9 148 77.7
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 4.4e-51 204.9 153 71.2
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 2.2e-50 202.6 152 75.7
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 3.7e-50 201.8 151 72.2
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 6.4e-50 201.1 146 74.7
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 6.4e-50 201.1 148 76.4
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 8.3e-50 200.7 150 74.7
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 1.1e-49 200.3 143 77.6
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 1.1e-49 200.3 143 77.6
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 1.9e-49 199.5 132 84.1
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 3.2e-49 198.7 150 72.7
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 9.2e-49 197.2 152 73.7
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 1.2e-48 196.8 147 77.6
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 1.2e-48 196.8 151 72.2
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 2.0e-48 196.1 148 73.6
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 4.6e-48 194.9 146 72.6
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 1.0e-47 193.7 151 71.5
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 3.9e-47 191.8 144 72.2
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 1.5e-46 189.9 143 72.0
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 7.3e-46 187.6 146 73.3
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 4.7e-45 184.9 139 71.2
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 3.1e-44 182.2 142 69.7
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 1.2e-43 180.3 150 71.3
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 1.5e-43 179.9 146 72.6
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 2.0e-43 179.5 153 64.7
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 2.9e-42 175.6 150 66.7
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 3.7e-42 175.3 143 67.1
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 1.1e-41 173.7 150 68.0
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 4.6e-40 168.3 147 68.7
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 3.0e-39 165.6 146 69.2
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 8.6e-39 164.1 111 83.8
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 1.9e-38 162.9 110 83.6
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 1.9e-38 162.9 224 49.6
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.4e-36 156.8 140 64.3
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 8.9e-36 154.1 150 63.3
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 8.9e-36 154.1 108 78.7
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 3.7e-34 148.7 110 79.1
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 1.1e-33 147.1 150 60.0
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 3.2e-33 145.6 142 52.8
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 2.1e-32 142.9 148 61.5
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 2.1e-32 142.9 109 73.4
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 2.7e-32 142.5 113 70.8
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 2.7e-32 142.5 143 52.4
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 3.9e-31 138.7 152 59.9
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 1.5e-30 136.7 150 57.3
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.5e-30 136.0 169 54.4
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 1.1e-28 130.6 118 63.6
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 3.1e-28 129.0 138 48.6
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 6.8e-28 127.9 150 57.3
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 6.8e-28 127.9 104 68.3
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.2e-27 127.1 91 76.9
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 9.9e-27 124.0 149 56.4
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 7.1e-25 117.9 81 82.7
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 2.7e-24 115.9 148 53.4
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 2.7e-24 115.9 148 53.4
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 2.0e-19 99.8 126 53.2
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 9.3e-17 90.9 65 75.4
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 6.2e-13 78.2 137 38.7
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 9.9e-11 70.9 52 71.2
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 1.9e-09 66.6 46 73.9
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 4.2e-09 65.5 127 40.2
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 7.1e-09 64.7 42 73.8
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 9.3e-09 64.3 137 32.8


User provided reference genes

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