Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 3.9e-81 304.7 148 100.0
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 6.7e-65 250.8 148 80.4
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 2.0e-64 249.2 148 81.1
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 1.5e-56 223.0 148 70.9
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 9.7e-56 220.3 148 68.2
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 2.2e-55 219.2 148 68.2
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 2.2e-55 219.2 148 68.9
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 2.2e-55 219.2 146 69.2
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 2.8e-55 218.8 148 68.9
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 4.8e-55 218.0 148 68.9
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 4.8e-55 218.0 148 66.9
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 6.3e-55 217.6 148 68.2
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 6.3e-55 217.6 148 68.2
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 1.4e-54 216.5 148 67.6
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 2.4e-54 215.7 148 67.6
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 3.1e-54 215.3 148 68.2
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 5.3e-54 214.5 148 68.2
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 9.1e-54 213.8 148 67.6
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 9.1e-54 213.8 148 68.2
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 2.7e-53 212.2 145 66.9
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 4.5e-53 211.5 143 69.9
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 1.0e-52 210.3 120 80.8
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 2.2e-52 209.1 148 66.2
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 2.9e-52 208.8 148 64.9
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 5.0e-52 208.0 148 66.2
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 6.5e-52 207.6 148 65.5
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 8.5e-52 207.2 148 66.9
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 1.5e-51 206.5 147 64.6
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 1.5e-51 206.5 148 64.9
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 2.5e-51 205.7 148 62.8
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 2.5e-51 205.7 148 62.8
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 2.5e-51 205.7 148 65.5
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 2.5e-51 205.7 148 64.2
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 4.2e-51 204.9 148 64.9
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 4.2e-51 204.9 148 63.5
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 5.5e-51 204.5 136 68.4
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 9.4e-51 203.8 146 62.3
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 1.2e-50 203.4 148 62.8
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 2.1e-50 202.6 136 67.6
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 2.1e-50 202.6 146 63.7
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 2.7e-50 202.2 148 62.8
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 3.6e-50 201.8 148 63.5
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 6.1e-50 201.1 148 62.8
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 6.1e-50 201.1 145 64.8
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 1.0e-49 200.3 148 62.8
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 1.0e-49 200.3 148 62.8
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 1.0e-49 200.3 148 62.8
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 1.0e-49 200.3 148 64.2
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 1.4e-49 199.9 148 65.5
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 2.3e-49 199.1 144 62.5
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 2.3e-49 199.1 148 61.5
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 3.0e-49 198.7 149 64.4
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 4.0e-49 198.4 148 62.8
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 5.2e-49 198.0 148 62.2
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 6.8e-49 197.6 148 62.2
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 6.8e-49 197.6 146 62.3
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 8.8e-49 197.2 144 67.4
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 1.2e-48 196.8 148 61.5
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 1.2e-48 196.8 148 63.5
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 1.5e-48 196.4 148 61.5
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 1.5e-48 196.4 146 64.4
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 2.6e-48 195.7 148 60.8
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 3.4e-48 195.3 148 61.5
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 3.4e-48 195.3 168 57.1
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 3.4e-48 195.3 165 60.0
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 9.8e-48 193.7 172 54.1
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 2.8e-47 192.2 149 60.4
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 3.7e-47 191.8 148 61.5
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 3.7e-47 191.8 172 53.5
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 4.8e-47 191.4 146 61.0
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 8.3e-47 190.7 154 61.0
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 1.1e-46 190.3 149 59.7
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 1.4e-46 189.9 148 58.8
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 1.4e-46 189.9 149 60.4
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 1.8e-46 189.5 149 63.8
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 2.4e-46 189.1 149 59.7
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 2.4e-46 189.1 149 59.7
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 5.4e-46 188.0 213 47.4
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 7.0e-46 187.6 151 59.6
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 9.1e-46 187.2 171 56.7
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 1.6e-45 186.4 146 57.5
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 2.0e-45 186.0 186 52.2
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 2.0e-45 186.0 149 61.7
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 3.5e-45 185.3 153 58.8
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 5.9e-45 184.5 144 56.9
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 1.0e-44 183.7 146 56.8
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 1.1e-43 180.3 148 55.4
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 2.5e-43 179.1 124 65.3
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 4.2e-43 178.3 142 54.9
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 7.2e-43 177.6 145 55.2
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 2.3e-41 172.6 174 50.6
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 1.2e-40 170.2 147 56.5
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 2.6e-40 169.1 127 61.4
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 1.4e-38 163.3 104 75.0
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 2.9e-36 155.6 111 67.6
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 1.1e-35 153.7 119 56.3
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 7.5e-32 141.0 104 62.5
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 7.3e-27 124.4 143 49.0
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 3.1e-25 119.0 94 57.4
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 2.2e-23 112.8 101 50.5
Eucgr.E01790 Eucalyptus grandis HOM05D007311 ORTHO05D009011 7.0e-22 107.8 77 64.9
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 1.1e-19 100.5 131 32.8
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 1.5e-16 90.1 103 48.5
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 5.8e-16 88.2 66 68.2
Ciclev10003443m.g Citrus clementina HOM05D007311 ORTHO05D009011 3.2e-14 82.4 77 49.4
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 7.1e-14 81.3 64 62.5
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 9.2e-14 80.9 121 41.3
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 1.2e-13 80.5 65 60.0
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 6.0e-13 78.2 142 29.6
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 1.7e-12 76.6 66 59.1
FAN13G1634 Fragaria x ananassa HOM05D007311 ORTHO05D009011 3.9e-12 75.5 45 66.7
Zm00001eb347540 Zea mays HOM05D007311 ORTHO05D009011 8.6e-12 74.3 67 49.3
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 2.0e-08 63.2 38 68.4
Eucgr.E01843 Eucalyptus grandis HOM05D007311 ORTHO05D009011 3.2e-06 55.8 47 48.9
Medtr2g084355 Medicago truncatula HOM05D003237 ORTHO05D003631 4.2e-06 55.5 44 65.9


User provided reference genes

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