Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 4.2e-98 361.7 231 100.0
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 3.3e-66 255.8 186 72.6
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 4.4e-63 245.4 184 72.3
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 2.4e-61 239.6 185 70.8
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 3.5e-60 235.7 175 72.6
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 6.0e-60 235.0 177 72.3
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.0e-59 234.2 177 72.3
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 1.0e-59 234.2 177 70.1
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 1.7e-59 233.4 182 68.7
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 1.7e-59 233.4 173 73.4
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 2.3e-59 233.0 172 72.1
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 5.1e-59 231.9 176 69.3
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 5.1e-59 231.9 180 71.1
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 6.6e-59 231.5 173 70.5
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 2.5e-58 229.6 186 69.9
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 3.3e-58 229.2 175 68.0
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 4.3e-58 228.8 173 69.4
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 4.3e-58 228.8 184 67.4
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 4.3e-58 228.8 173 70.5
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 4.3e-58 228.8 178 71.9
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 5.6e-58 228.4 175 69.7
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 9.5e-58 227.6 173 69.9
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 9.5e-58 227.6 175 69.1
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 1.2e-57 227.3 173 70.5
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 1.2e-57 227.3 175 69.7
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.2e-57 227.3 171 70.2
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 1.6e-57 226.9 176 69.9
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 1.6e-57 226.9 173 69.4
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 1.6e-57 226.9 172 70.3
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 1.6e-57 226.9 173 71.7
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.6e-57 226.9 186 69.9
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 3.6e-57 225.7 170 70.0
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 4.7e-57 225.3 173 70.5
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 4.7e-57 225.3 170 70.0
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 4.7e-57 225.3 178 68.5
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 6.2e-57 224.9 173 68.2
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 6.2e-57 224.9 189 65.1
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 8.1e-57 224.6 173 69.9
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 1.1e-56 224.2 173 68.8
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 1.1e-56 224.2 179 68.7
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 1.4e-56 223.8 173 69.4
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 1.8e-56 223.4 170 70.6
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 3.1e-56 222.6 175 68.6
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 6.8e-56 221.5 172 69.8
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 1.2e-55 220.7 174 67.8
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 1.2e-55 220.7 173 67.6
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 2.6e-55 219.5 168 70.8
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 3.4e-55 219.2 168 69.6
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 5.8e-55 218.4 174 69.5
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 9.9e-55 217.6 175 66.9
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 9.9e-55 217.6 141 80.1
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 1.3e-54 217.2 165 73.3
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 1.3e-54 217.2 173 68.8
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 1.7e-54 216.9 169 68.6
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 1.7e-54 216.9 170 67.6
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 1.7e-54 216.9 180 67.8
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 2.9e-54 216.1 171 67.8
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 6.4e-54 214.9 167 70.1
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 8.3e-54 214.5 172 68.6
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 8.3e-54 214.5 172 68.6
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 8.3e-54 214.5 182 65.4
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 8.3e-54 214.5 181 66.9
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 8.3e-54 214.5 168 66.7
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 4.1e-53 212.2 181 63.5
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 4.1e-53 212.2 167 69.5
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 4.1e-53 212.2 168 66.1
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 5.4e-53 211.8 139 77.0
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 5.4e-53 211.8 145 75.2
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 7.1e-53 211.5 184 64.7
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 1.6e-52 210.3 170 65.3
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 2.1e-52 209.9 142 75.4
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 2.1e-52 209.9 168 67.3
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 2.7e-52 209.5 171 65.5
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 4.6e-52 208.8 188 60.6
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 7.8e-52 208.0 172 68.6
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 1.3e-51 207.2 160 71.2
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 1.3e-51 207.2 168 66.7
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 1.7e-51 206.8 188 62.8
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 2.3e-51 206.5 134 76.1
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 8.6e-51 204.5 169 65.7
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 1.1e-50 204.1 167 67.1
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 1.9e-50 203.4 188 59.0
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 3.3e-50 202.6 167 67.1
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 7.3e-50 201.4 184 63.6
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 2.1e-49 199.9 180 60.6
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 2.1e-49 199.9 177 66.1
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 4.7e-49 198.7 125 78.4
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 4.7e-49 198.7 125 78.4
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 4.7e-49 198.7 137 73.7
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 6.2e-49 198.4 191 58.1
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 1.1e-48 197.6 183 60.7
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 2.4e-48 196.4 127 76.4
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 3.1e-48 196.1 202 57.9
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 2.0e-47 193.4 122 77.9
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 3.4e-47 192.6 166 60.8
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 5.8e-47 191.8 149 68.5
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 7.6e-47 191.4 123 78.9
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 3.2e-45 186.0 150 68.7
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 2.1e-44 183.3 121 75.2
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 7.8e-44 181.4 201 57.7
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 1.7e-43 180.3 164 59.1
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 2.3e-43 179.9 161 64.6
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 3.0e-43 179.5 196 54.1
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 3.6e-41 172.6 151 64.9
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 8.1e-41 171.4 174 54.0
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 3.4e-39 166.0 257 42.0
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 4.9e-38 162.2 160 54.4
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 6.4e-38 161.8 191 49.2
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 1.9e-37 160.2 151 59.6
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 2.0e-31 140.2 170 45.9
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 1.3e-27 127.5 102 64.7
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 2.4e-24 116.7 98 59.2
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 6.9e-24 115.2 137 43.8
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 1.2e-23 114.4 119 52.1
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 3.4e-23 112.8 169 46.2
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 5.8e-23 112.1 99 62.6
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 4.2e-21 105.9 92 65.2
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 9.3e-21 104.8 135 40.0
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.9e-19 99.4 70 75.7
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 2.0e-15 87.0 71 67.6
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 1.8e-11 73.9 149 39.6


User provided reference genes

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