Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 7.9e-126 453.8 224 100.0
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 2.3e-61 239.6 226 57.5
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 4.9e-59 231.9 224 57.6
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 1.1e-58 230.7 226 56.2
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 1.4e-58 230.3 226 55.8
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 1.9e-58 229.9 223 54.7
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 2.4e-58 229.6 226 55.8
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 2.4e-58 229.6 226 54.9
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 9.2e-58 227.6 231 56.3
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 1.2e-57 227.3 226 51.8
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 7.8e-57 224.6 223 56.5
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 1.3e-56 223.8 227 52.4
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 5.1e-56 221.9 228 56.1
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 1.5e-55 220.3 224 54.9
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 1.5e-55 220.3 228 53.1
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 1.9e-55 219.9 233 52.8
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 3.3e-55 219.2 232 52.2
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 3.3e-55 219.2 224 55.8
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 6.2e-54 214.9 222 51.8
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 8.1e-54 214.5 233 51.5
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 1.1e-53 214.2 224 49.1
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 4.0e-53 212.2 214 52.8
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 8.9e-53 211.1 234 50.4
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 1.5e-52 210.3 222 50.9
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 4.4e-52 208.8 219 52.5
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 5.8e-52 208.4 248 48.8
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 2.2e-51 206.5 226 51.3
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 2.2e-51 206.5 248 48.8
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 6.4e-51 204.9 246 49.6
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 1.2e-49 200.7 229 49.3
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 1.2e-49 200.7 229 49.3
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 2.1e-49 199.9 259 45.9
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 1.1e-47 194.1 224 46.9
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 1.1e-47 194.1 212 50.5
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 1.5e-47 193.7 227 45.8
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 5.6e-47 191.8 267 43.8
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 1.3e-46 190.7 224 47.3
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 1.8e-45 186.8 224 46.0
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 1.2e-44 184.1 229 48.9
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 7.6e-44 181.4 259 42.1
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 3.0e-40 169.5 230 45.7
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 3.9e-40 169.1 223 43.0
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 5.1e-40 168.7 249 43.8
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 6.6e-40 168.3 137 63.5
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 3.3e-39 166.0 215 48.8
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 1.3e-38 164.1 224 47.8
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 6.2e-38 161.8 241 44.0
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 1.7e-35 153.7 252 38.9
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 1.8e-29 133.7 198 42.9
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 2.0e-28 130.2 180 45.0
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 2.6e-28 129.8 167 46.1
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 2.6e-28 129.8 170 46.5
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 1.9e-26 123.6 170 45.9
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 1.9e-26 123.6 170 45.9
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 4.2e-26 122.5 170 46.5
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 1.6e-25 120.6 202 38.1
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 1.8e-24 117.1 214 36.4
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 1.2e-20 104.4 163 42.3
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 7.2e-18 95.1 74 60.8
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 3.6e-17 92.8 75 57.3
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 1.0e-16 91.3 67 62.7
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 3.3e-15 86.3 147 40.1
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 1.2e-09 67.8 40 65.0


User provided reference genes

Program Settings