Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 1.6e-274 948.7 470 100.0
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 4.3e-222 774.6 472 80.5
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 4.9e-218 761.1 466 78.8
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 1.4e-217 759.6 466 78.3
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 3.3e-214 748.4 475 76.4
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 1.6e-213 746.1 464 77.2
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 3.6e-213 745.0 466 76.6
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 4.7e-213 744.6 466 76.4
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 8.0e-213 743.8 462 77.7
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 3.1e-212 741.9 464 76.7
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 5.2e-212 741.1 466 76.2
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 1.5e-211 739.6 462 76.6
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 2.0e-211 739.2 469 75.1
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 2.0e-211 739.2 458 77.7
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 2.6e-211 738.8 466 75.5
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 3.4e-211 738.4 462 75.5
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 5.8e-211 737.6 466 75.3
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 7.5e-211 737.3 460 76.7
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 1.3e-210 736.5 462 75.3
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 1.7e-210 736.1 465 75.7
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 1.7e-210 736.1 466 75.5
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 6.4e-210 734.2 462 74.9
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 1.1e-209 733.4 466 75.5
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 1.9e-209 732.6 462 76.6
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 1.9e-209 732.6 470 75.5
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 5.4e-209 731.1 467 74.7
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 9.2e-209 730.3 462 76.0
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 1.2e-208 729.9 464 74.4
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 1.6e-208 729.6 463 75.2
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 1.6e-208 729.6 479 73.5
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 2.1e-208 729.2 464 74.6
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 3.5e-208 728.4 464 75.2
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 7.8e-208 727.2 467 74.7
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 1.0e-207 726.9 462 75.3
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 1.0e-207 726.9 464 74.1
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 1.3e-207 726.5 466 75.1
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 3.9e-207 724.9 490 72.7
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 3.3e-206 721.8 472 74.4
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 5.6e-206 721.1 466 74.0
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 9.5e-206 720.3 492 70.5
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 2.1e-205 719.2 466 74.5
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 3.6e-205 718.4 508 70.1
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.1e-204 716.8 492 70.7
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 8.9e-204 713.8 495 70.3
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 2.0e-203 712.6 464 72.4
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 2.9e-202 708.8 501 69.7
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 3.7e-202 708.4 460 73.3
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 8.3e-202 707.2 499 69.5
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 1.2e-197 693.3 544 65.8
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 2.1e-197 692.6 463 71.1
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 4.0e-196 688.3 459 70.6
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 5.4e-193 677.9 502 64.9
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 2.3e-191 672.5 462 68.4
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 3.9e-191 671.8 463 71.5
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 3.3e-190 668.7 539 62.9
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 7.3e-190 667.5 424 77.1
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 4.7e-189 664.8 463 67.0
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 5.4e-185 651.4 464 70.0
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 1.3e-183 646.7 402 75.1
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 6.6e-183 644.4 466 69.5
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 7.3e-182 641.0 393 78.4
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 1.4e-180 636.7 384 79.4
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 2.4e-180 636.0 463 67.4
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 9.0e-180 634.0 403 74.9
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 9.0e-180 634.0 403 74.9
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 7.6e-179 630.9 459 64.1
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 1.3e-178 630.2 460 64.3
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 2.9e-178 629.0 463 66.1
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 4.9e-178 628.2 470 64.5
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 1.6e-176 623.2 466 68.7
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 3.9e-175 618.6 409 71.1
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 9.9e-171 604.0 460 64.8
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.5e-166 590.1 375 75.5
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 7.4e-166 587.8 365 78.1
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 7.4e-166 587.8 464 64.7
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 1.1e-164 583.9 497 60.6
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 1.1e-153 547.4 325 80.9
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 1.0e-151 540.8 333 77.2
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 6.7e-151 538.1 364 72.3
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.4e-140 503.1 374 70.1
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 8.5e-122 441.4 280 74.6
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 7.0e-100 368.6 226 77.4
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 3.8e-69 266.5 453 32.9
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 5.1e-66 256.1 167 74.9
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 8.1e-64 248.8 156 77.6
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 4.0e-55 219.9 236 53.8
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 8.7e-50 202.2 159 65.4
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 5.7e-41 172.9 120 66.7
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 7.7e-30 136.0 440 26.8
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 4.8e-24 116.7 411 26.0
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 8.2e-24 115.9 392 25.3
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 3.5e-22 110.5 77 64.9
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 7.4e-17 92.8 335 25.4
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 3.1e-15 87.4 483 23.6
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 2.0e-14 84.7 57 71.9
PRCOL_00006301 Prasinoderma coloniale HOM05D007497 ORTHO05D022249 1.4e-07 62.0 363 23.7
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 5.4e-07 60.1 50 52.0


User provided reference genes

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